Trichechus manatus latirostris (Florida manatee): 101346768
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Entry
101346768 CDS
T05135
Name
(RefSeq) splicing factor 1 isoform X1
KO
K13095
splicing factor 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101346768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmu03041
]
101346768
Spliceosome [BR:
tmu03041
]
Complex A
Other components
Complex A specific factors
101346768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
KH_12
zf-CCHC_5
zf-CCHC_3
KH_NusA_1st
Motif
Other DBs
NCBI-GeneID:
101346768
NCBI-ProteinID:
XP_004383818
UniProt:
A0A2Y9DZ68
LinkDB
All DBs
Position
Unknown
AA seq
639 aa
AA seq
DB search
MATGANATPLDFPNKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIED
LTRKLRTGDLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALN
PDFKPPADYKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGK
GSVKEGKVGRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLR
KMQLRELARLNGTLREDDNRILRPWQSSESRSITNTTVCTKCGGAGHIASDCKFQRPGDP
QSAQDKARMDKEYLSLMAELGEAPVPASVGSTSGPSATPLASAPRPAAPASNPPPPSLMS
TTQSRPPWMNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGP
PPPWMQPPPPPMSQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPP
PPPPPSGQPPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGS
IPPWQQQQAAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPPPPPGSAGMMYAPP
PPPPPPMDPSNFVTMMGMGVAGMPPFGMPPAPPPPPPQN
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccggagcgaacgccacgccgctggacttcccaaataagaagcggaagaggagc
cgctggaaccaggacacaatggaacagaagacagtgattccaggaatgcctaccgttatt
cctcctggacttactcgagaacaagaaagagcttatatagtgcaactgcagatagaagac
ctgactcgtaaactgcgcacaggagacctgggcatcccccctaaccctgaggacaggtcc
ccttcccctgagcccatctacaatagcgaggggaagcggcttaacacccgcgagttccgc
acacgtaaaaagctcgaagaggagcggcataatctcatcacggagatggttgcgctcaac
cctgatttcaagccacctgcagattacaaacctccggcaacgcgtgtgagtgacaaagta
atgattccacaagatgagtatccagaaatcaactttgtggggctgcttattgggcccaga
gggaacaccctgaagaacatagagaaagagtgcaacgccaaaattatgatccgagggaaa
gggtctgtgaaagaagggaaggttgggcgcaaagatggccagatgttgccaggggaagat
gagccgcttcatgccctggtgaccgccaacaccatggagaatgttaagaaggcagtagaa
cagataagaaacatcctgaagcagggtattgagacccctgaggaccagaacgatctacgg
aagatgcagcttcgggagttggcgcgattgaatgggacacttcgggaagatgacaacagg
atcttgaggccctggcagagctcagagagccgcagcattaccaataccacggtgtgcacc
aagtgtggaggggccggccacattgcctcagactgcaaattccagaggcctggtgaccca
cagtcagctcaggataaagcacgtatggataaagagtatttgtccctcatggctgagctg
ggtgaagcgcctgtcccagcatctgtgggctccacctctgggccttctgccacacccctg
gccagtgcacctcggcctgctgctcctgccagcaacccacctccaccgtctctcatgtcc
accacccagagtcgcccaccctggatgaattccggcccttcagagagtcggccctaccat
ggcatgcacggaggtggtcctggtggaccaggaggtggcccccacagcttcccacaccca
ttacccagcctgacaggtgggcatggtggacatcccatgcagcacaaccctaatggaccc
ccacccccttggatgcagccgccaccaccaccgatgagtcagggcccccacccacctggg
caccatggccctcctccaatggatcagtacctgggaagtacgcctgtgggctctggggtc
tatcgcctgcatcaaggaaaaggtatgatgccaccgccgcctatgggcatgatgccgccg
ccgccgccgcctcccagtgggcagccgccgccccctccctctggtcctcttcccccatgg
caacagcagcagcagcagcctccgccacctcctccgcccagcagcagtatggcttccagc
acccccttgccatggcagcaaaatacgacgactaccaccacgagcgctggcacagggtcc
atcccgccatggcaacagcagcaggcggctgccgcagcttctccaggagcccctcagatg
caaggcaaccccactatggtgcccctgccccccggggtccagccgcctctgccgcccggt
gcccctccccctccgccgcctccgccacctggttccgccggcatgatgtatgccccaccc
ccccctcctccgcctcccatggacccttctaactttgtcaccatgatgggcatgggggtg
gcgggcatgccgcccttcgggatgcctccagctcccccaccgcctccaccacagaactag
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