Trichechus manatus latirostris (Florida manatee): 101346862
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Entry
101346862 CDS
T05135
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X2
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
101346862
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
tmu01001
]
101346862
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmu04121
]
101346862
Enzymes [BR:
tmu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
101346862
Protein kinases [BR:
tmu01001
]
Serine/threonine kinases: Other
Other
101346862
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
101346862
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ANAPC4_WD40
Motif
Other DBs
NCBI-GeneID:
101346862
NCBI-ProteinID:
XP_012415563
UniProt:
A0A2Y9G5W8
LinkDB
All DBs
Position
Unknown
AA seq
1507 aa
AA seq
DB search
MTTVAVHVDSKAELTTLLEQWEKEHGSGQDMVPILTRMSELIEKETEEYRKGDPDPFDDR
HPGRADPECMLGHLLRILFKNDDFMNALVNAYVMTSREPPLNTAACRLLLDIMPGLETAV
VFQEKEGIVENLFKWAREADQPLRTYSTGLLGGAMENQDIAANYRDENSQLVAIVLRRLR
ELQLQEVALRQENKRPSPRKLSSEPLLPLDEEAVDMDYGDMAVDVVDGEQEEASGDMEIS
FHLDSSHKTSSRVNSATKPEEGGLRKNKSAKQGDRESFRKAKQKLGFSSSDPDRMFVELS
NSSWSEMSPWVIGTNYTLYPMTPAIEQRLILQYLTPLGEYQELLPIFMQLGSRELMMFYI
DLKQTNDVLLTFEALKHLASLLLHNKFATEFVAHGGVQKLLEIPRPSMAATGVSMCLYYL
SYNQDAMERVCMHPHNVLSDVVNYTLWLMECSHASGCCHATMFFSICFSFRAVLELFDRY
DGLRRLVNLISTLEILNLEDQGALLSDDEIFASRQTGKHTCMALRKYFEAHLAIKLEQVK
QSLQRTEGGILVHPQPPYKACSYTHEQIVEMMEFLIEYGPAQLYWEPAEVFLKLSCVQLL
LQLISIACNWKTYYARNDTVRFALDVLAILTVVPKIQLQLAESVDVLDEAGSTVSTVGIS
IILGVAEGEFFIHDAEIQKSALQIIINCVCGPDNRISSIGKFISGTPRRKLPQTPKSSEH
TLAKMWNVVQSNNGIKVLLSLLSIKMPITDADQIRALACKALVGLSRSSTVRQIISKLPL
FSSCQIQQLMKEPVLQDKRSDHVKFCKYAAELIERVSGKPLLIGTDVSLARLQKADVVAQ
SRISFPEKELLLLIRNHLISKGLGETATVLTKEADLPMTAASHSSAFTPVTAAASPVSLP
RTPRIANGIATRLSSHAAVAPSAPPAPAAHPQPRPPQSSLALPGPSYAGSSPLIGRISFM
RERPSPCNGRKIRVLRQKSDHGAYSQSPAIKKQLDRHLPSPPTLDSIITEYLREQHARCK
NPVATCPPFSLFTPHQCPEPKQRRQAPINFTSRLNRRASFPKYGGVDGGCFDRHLIFSRF
RPISVFREANEDESGFTCCAFSARERFLMLGTCTGQLKLYNVFSGQEEASYNCHNSAITH
LEPSRDGSLLLTSATWSQPLSALWGMKSVFDMKHSFTEDHYVEFSKHSQDRVIGTKGDIA
HIYDIQTGNKLLTLFNPDLANNYKRNCATFNPTDDLVLNDGVLWDVRSAQAIHKFDKFNM
NISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRVVFNHTGTVMYGAMLQADDEDD
LMEERMKSPFGSSFRTFNATDYKPIATIDVKRNIFDLCTDTKDCYLAVIENQGSMDSLNM
DTVCRLYEVGRQRLAEDEDEEEDQEEEEQEEEDDDEDDDDTDDLDELDTDQLLEAELEED
DNNENAGEDGDNDFSPSDEELANLLEEGEDGEEEDSDADEEVELILGDTDSSDNSDLEDD
IILSLNE
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgactacagtagcggtacatgtggactccaaagctgagctcactaccctgctggagcag
tgggaaaaggaacatggcagtgggcaggacatggtccctatccttacccggatgtctgaa
ttgattgaaaaagaaactgaagaatatcgtaagggagatccagacccatttgatgatcga
catcctggtcgagctgatccagagtgtatgctgggccacttgctgagaatactcttcaag
aatgatgatttcatgaatgcattggtgaatgcatatgtgatgacaagcagagagccccct
ttaaatactgcggcttgtagactcctactggacatcatgccagggctggaaactgctgtt
gtctttcaagaaaaggaaggaattgtcgaaaatcttttcaaatgggcccgagaggctgat
caaccattgaggacatattctactggactattaggaggtgctatggaaaatcaagacatt
gctgccaattacagggatgaaaattcacagctggtggcaatagtgcttcgaagactgagg
gaactacagcttcaggaagtggctttgcggcaagaaaacaagcgtcctagcccgcgaaag
ctctcctctgaaccccttttgcctctggatgaagaagctgtggatatggactatggagac
atggcagtagatgtagtggatggtgaacaagaggaagcctccggagacatggagatctct
tttcatcttgattcaagccacaagaccagtagcagagtgaactcagcaaccaaacctgag
gaaggaggattgaggaaaaacaagtcagcaaaacagggagacagagagagctttagaaaa
gccaagcaaaagttgggtttctcatcttctgatccagatcgcatgtttgttgagttgtct
aatagcagctggtcagaaatgtctccctgggtgattggcaccaattataccctttaccct
atgactcctgctattgagcagcggctcattctccagtatttgacccctctaggagaatac
caggagttgcttcccatattcatgcaacttggatcacgagagttgatgatgttctatatt
gacctgaaacaaactaacgatgtcctccttacttttgaggcactcaagcacctagcatct
ctcctgctccataacaagtttgccacagagtttgttgctcatggtggagtacagaaatta
ctggaaattcctcgtccttctatggctgcaactggtgtatccatgtgcttgtattacctg
tcctacaaccaggatgccatggaaagagtttgcatgcatccccacaatgttctgtctgat
gtggtgaactatactctgtggttaatggagtgttctcatgcctcaggatgctgccatgct
accatgtttttctcaatttgcttctcctttcgggccgtcttggagctctttgaccgctat
gatggtcttcgtcgtctggtgaacttgataagtactttggagattttaaatttagaagat
caaggtgcacttctgagtgacgatgaaatatttgctagccgccagactgggaaacatact
tgcatggccttgcgcaagtactttgaggctcacctggccattaaattggagcaagtgaag
cagtcgcttcagaggactgaaggtggtattcttgtccatcctcagcccccgtacaaggca
tgttcatatactcatgaacagattgtggaaatgatggaatttttgatagaatacggccca
gcgcagttatattgggaaccagctgaagtcttcctcaaactttcttgtgtgcaactcttg
ttgcagcttatttctattgcctgcaattggaagacctattatgcaaggaatgacactgtg
cgctttgctttggatgtcctggctattctcacagtagtcccaaaaatccagctccagctg
gcagaatcagtggatgtgctggatgaggctggctccactgtctccactgtaggtatcagc
attattttgggagtggctgagggtgaattctttatccatgatgctgaaatccagaagtca
gcacttcaaattatcatcaattgtgtgtgtggcccagataaccgaatctccagtattggc
aaatttatctctggaactcctcggagaaagctgcctcagacccccaaaagcagtgagcac
accctggctaagatgtggaatgtggtccagtccaacaatggcatcaaggtgctcctgtcc
ttactgtccatcaagatgcccatcacagatgcagaccagatccgggccctggcctgcaag
gccctagtgggcctgtctcgtagtagcactgtccggcagatcatcagcaaactgcccctt
ttcagcagctgccagatccagcagctgatgaaggagcctgtgctgcaggacaagcgcagc
gaccacgtcaagttctgcaagtatgcagctgaactcattgaacgggtgtcaggaaagcca
cttctcattggcaccgatgtgtccctggcacgactgcagaaagcagatgttgtcgctcag
tcaaggatctccttccctgagaaagagctacttctgttgatacgaaaccatctcatttct
aaagggcttggagagacagcaactgtgctgacgaaagaggcagacctgcctatgactgct
gcgtcccattcctctgccttcaccccagtcactgctgctgcttcccctgtctctcttccc
cgaactcctcgcattgccaacggcattgcaacccgactgagcagccatgctgccgtggcc
ccttctgccccccctgcccctgctgcccaccctcagccacggccaccccagagttcacta
gctctgcccggcccatcttatgcaggcagttcccctttgattggcaggatcagttttatg
agagagaggccatcgccctgtaatggcagaaaaatcagagtgttgcggcagaagtcggac
catggcgcctacagccaaagtccagccataaaaaagcagttggacagacatcttccttcc
ccacctacgctggacagtatcatcacagagtatcttagagagcagcatgctcgctgcaag
aacccagttgccacctgcccacctttctctctctttactcctcaccagtgtcctgagcca
aaacagaggcggcaagcgccaataaactttacctcaaggctaaaccgcagggcatcattt
ccaaagtatggaggggtggatggcggatgctttgataggcaccttatctttagcaggttc
cgtcctatttcagtattccgggaagccaatgaagatgagagtggcttcacctgctgtgca
ttctcagcacgggagcggttcctgatgcttggcacctgcacgggacagctgaagctctat
aatgtgtttagtggacaggaggaggccagctataattgtcacaactcagccatcacacac
cttgaaccttccagggatgggtccttgctgctgacatctgctacttggagccagcctctg
tctgcactttggggaatgaaatcagtattcgatatgaagcattccttcacggaagatcac
tatgttgagttcagtaagcactctcaggatcgggtcataggcacaaaaggggacattgcc
cacatttatgatattcagactggcaacaagctgttgactctgtttaacccagatcttgcc
aacaactacaagaggaactgtgccacctttaatcctacagatgatcttgtcttaaatgat
ggcgtcctctgggatgtccgctctgcacaggccatccacaagtttgacaagttcaacatg
aacatcagtggtgttttccatccgaatggtctggaggtcatcattaatactgagatttgg
gacctccgcactttccatcttttacacacagttcctgctctggatcagtgccgcgtggtg
ttcaaccacacagggacagtgatgtatggagctatgttgcaggcagacgatgaagatgac
ttaatggaagaaaggatgaaaagcccttttgggtcatccttccgaacatttaatgcaact
gactacaaacctatagccaccattgatgtgaagcggaatatctttgacctgtgcacagac
accaaagactgctatctcgctgtcattgagaaccaaggcagcatggactccctgaacatg
gacacggtgtgcagactgtatgaagtgggcaggcagcgtctggcagaggatgaggatgaa
gaggaggaccaggaagaggaagagcaggaggaagaagatgacgacgaagatgatgacgac
actgatgatctagatgagctcgacactgaccagctgctggaggcggagctggaggaagac
gacaacaacgagaacgcaggggaggatggggacaatgacttctctccctctgatgaggag
ctagcaaacctgctagaggagggagaggacggggaggaggaggactctgatgcagacgag
gaggtggaactgatcctgggggacactgacagctccgacaactccgatttggaagatgac
atcatcttatctctgaacgagtga
DBGET
integrated database retrieval system
