Trichechus manatus latirostris (Florida manatee): 101347013
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Entry
101347013 CDS
T05135
Name
(RefSeq) protocadherin beta-3
KO
K16494
protocadherin beta
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101347013
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101347013
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Flavi_NS2B
Motif
Other DBs
NCBI-GeneID:
101347013
NCBI-ProteinID:
XP_004391293
UniProt:
A0A2Y9ED81
LinkDB
All DBs
Position
Unknown
AA seq
782 aa
AA seq
DB search
MKARGERFLRQRQVLLLFVFLGGFLAVSESGRYSVAEEQERGFLIANLAKDLGLRVGELA
ARRAQVESKGNKRHFQFNYQTGDLLLNEKLDREELCGPTEPCILYFQVLLQNPLQLFTNE
LQVTDVNDHSPIFLENEMQLKILESSPPGTTFPLENAEDLDVGRNSLQNYTVIPNSHFHV
LTRNRRDGRKYPELVLDKALDREELPELSLTLTALDGGSPPRSGTAQINILVLDINDNAP
EFAQSLYEVQILENSPLNSVIVTVSATDLDTGNFGTIAYALSHASEEIRKTFQLNPVTGD
IQLVKYLNFEAINTYEVDIEAKDGGGLSGKSTVIIQVVDVNDNPPELTLSSVNSPIPENS
LDTAVAIFRISDLDSGDNGRMMCSIPEDLPFVLKPSAENFYTLVSKGALDREKRAQYNVT
ITVTDLGTPRLKTQHNITVWVSDVNDNAPTFTQSSYTLFVRENNSPVLHMGSVSATDRDS
GTNAQITYSLLPPQDPHLPLDSLISINADNGHLFALRSLDYEALRAFEFRVGATDAGSPA
LSSEALVRVVVGDDNDNSPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKATEPGLFSVWAHNGEVRTARLLSERDTVKHRLLVLVKDNGEPPMSATVTLHV
LLVDGFSQPYLPLPEMAPDEAQADLLTVYLVIALASVSSLFLFSVLLFLAVWLYRRNRAA
LVDCNPVPDSNFPGHLVDVRGTGTLSQSYQYEVCLMGASGIKQFKFLKPVIPSGLVQDTE
QY
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcaagaggggagcgctttcttagacaaaggcaagtcctacttctctttgttttc
ttgggtgggtttctggctgtgtcagagtccggtcgctattctgtggctgaggaacaagag
aggggctttttaatagccaacctagcaaaggatctgggactgagggtaggagaactggcc
gcgaggagagcccaagttgagtccaaagggaacaaacggcattttcagttcaactatcag
acgggtgatttgctcctgaatgagaaattggatcgggaggagctgtgcggccccacagag
ccatgtatactgtattttcaggtattgctgcaaaaccctttacagttgtttacaaatgag
ctccaggtcacagatgtaaatgaccattctcccatattccttgaaaatgaaatgcagctg
aaaatcctagaaagcagtccaccaggaacaacatttcctttggaaaatgctgaggacttg
gatgtgggaagaaacagtctccaaaactacacagtcattcccaattcccatttccacgtt
ctcacgcgcaatcgtagggacggaaggaaatacccagaactagtgctggacaaagcgctg
gatcgcgaggaactgccggagctcagtttaacactcacagcgctggatggcggatctcca
ccccggtctgggacagcccagatcaacatcctggtgttagacataaatgacaatgcccca
gaatttgcacaatctctctacgaggttcaaattctagagaacagtccccttaactccgtc
attgtcactgtctcagctactgatctagatacaggaaattttgggacaatagcatatgca
ttatcccacgcttcggaagaaattcgcaaaacttttcaactaaacccagttaccggtgat
attcaactagtcaagtacttgaattttgaggcgattaatacttacgaagtcgacatagag
gccaaggatggcggaggactttccggaaaatccacagtcataattcaggtggtggacgtg
aatgataacccaccggaactgaccttatcgtcagttaacagccctatcccagagaattcg
ctggatactgcggtagctattttcagaatttccgatctagactctggagacaatggaagg
atgatgtgctccatcccggaagatcttcccttcgtcctgaaaccatccgcagagaatttt
tacactctagtgtcaaaaggagcgctggacagagagaagagagcccagtacaatgtaact
atcaccgtcactgacttgggtacccccaggctgaaaacgcaacacaacataacggtgtgg
gtttcagatgtcaatgacaatgctccaactttcactcaaagctcctacaccctgtttgtc
cgcgagaacaacagccccgtcctgcacatgggcagcgtcagcgccacagacagagactca
ggcaccaacgcccaaatcacctactcgctgctgccgccccaggacccgcacctccccctc
gactccttgatctccatcaacgcggacaacggccacctgttcgctctcaggtcgctggat
tacgaggccctgcgagccttcgagttccgcgtgggcgccacagacgcaggctccccggcg
ctgagcagcgaggcgctggtgcgcgtggtggtcggggacgacaacgacaactcgcccttc
gtgctgtacccgctgcagaacggctctgcgccctgcacagaactggtgcccagggcagcc
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcctaccagctgctcaaggccacggagcccgggctgttcagcgtgtgggcgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacacagtcaagcacaggctc
cttgtgctggtcaaggacaatggcgagccgccaatgtcggccaccgtcacgctgcacgtg
ctcctggtggacggcttctcgcagccctacttaccgctcccagagatggccccggacgaa
gcccaggccgacttgctcacagtctacttggtcattgcgttggcgtcggtctcgtcgctc
ttcctgttctccgtgctcttgtttctggcggtgtggctgtacagaaggaacagggccgcc
ttggtggattgcaacccagtgcctgacagcaactttccgggccacttggtggacgtaagg
ggcaccgggaccctgtcccagagctaccaatatgaggtgtgcctgatgggagcctctggg
ataaagcagttcaagttcctgaagccagttatccccagtggtctagttcaagacactgag
caatactag
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