Trichechus manatus latirostris (Florida manatee): 101347268
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Entry
101347268 CDS
T05135
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101347268
Transcription factors [BR:
tmu03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
101347268
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_4
HLH
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
101347268
NCBI-ProteinID:
XP_004381855
UniProt:
A0A2Y9DWP9
LinkDB
All DBs
Position
Unknown
AA seq
592 aa
AA seq
DB search
MAAPYPSSAGGGEVKCGAGGGGSVRWDFLPAVKAPPGPCLQAQRKEKSRNAARSRRGKEN
LEFFELAKLLPLPGAISSQLDKASIVRLSVTYLRLRRFAALGAPPWGLRAAGPPAGLAQA
RRSSSALVSDVFEQHLGGHILQSLDGFVFALNQEGKFLYISETVSIYLGLSQVELTGSSV
FDYIHPGDHSEVLEQLGLQAPVPGPPTPPSISSSSSSSSSSSSLAETPEIEASPAQVPPS
SRVQERSFFIRMKSTLTKRGLHVKASGYKVIHVTGRLRARALGLVALGHALPPAPLAELP
LHGHTIVFRLSLGLTILACESRVSDHMDLEPSELVGRSCYQFVHGQDAARIRQSHLDLLD
KGQVMTGYYRWLQRAGGFVWLQSVATVAVSGKSPGERHVLWVSYVLSQAEGDQTPLDAFQ
LPARVACEDPSSPEPEPTEPDRPVAGKQIVPQDKDEPPQTRGKRIKVEPGRGETKDPEDS
GDEASSSHLAPPQPEFTSVIRAGALKPDVVQPWGLAPPGEPPPSVFHVGFLPPTMRGLCT
PGTIRYGPTELGLMYPHLQRLGPGPARPEAFYPALGLPYPGPTDTRGQRKRD
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccctaccccagcagtgccggcggcggcgaggtcaaatgcggggcaggaggt
gggggcagcgtccggtgggactttctgcccgcggtcaaggctccgcccggaccgtgcctg
caggcgcagcgcaaagagaaatcccgcaacgctgcgcgctcaaggcgcgggaaggaaaac
ctggagttcttcgagctggccaagctgctccctctgcccggcgccatctccagccagctg
gacaaggcgtccatcgtgcgcctcagcgtcacctacctccgcctgcgccgcttcgcagcg
ctcggggcacccccctgggggctgcgggcagctgggccgcctgctggcctggcccaagcc
cgcaggtcctcctctgcgctggtctccgacgtcttcgagcagcacctgggaggacacatc
ttacagtccctggacggcttcgtctttgccttgaaccaggagggaaagttcctttacatc
tcagagactgtgtccatctatctgggtctctcacaggtggagctgacgggcagcagcgtc
tttgactacatccatcctggagaccactccgaagtgctggagcagctggggctgcaggcg
cccgtgcctgggccccccaccccgccctccatctcttcctcttcttcctcctcctcctct
tcctcctcgcttgcggagacccctgagattgaggccagccctgctcaggtgcccccatcc
tcccgagtccaggagcgctccttctttatccgcatgaaatccaccctcaccaagcggggg
ctgcacgtcaaggcctcggggtacaaggtcatccacgtgaccgggcgccttcgggcccgc
gccctgggcctcgtggcccttggtcacgcgctgcccccagccccactggcggagctgcca
ctgcacggtcacacgatcgtcttccgcctcagcctgggtctcaccatccttgcttgtgag
agcagagtcagcgaccacatggacctagagccctcggagctggtgggccgcagctgctac
cagttcgtccacggtcaggatgcagccagaatccgccaaagccacctggacctgctggac
aagggtcaggtgatgaccggttactaccgttggctgcagcgcgccgggggcttcgtgtgg
ctgcagtctgtggccaccgtggccgtgagcggcaagagccctggggagcgccatgtgctc
tgggtcagctacgtgcttagccaagccgagggggaccaaacgcctctggacgccttccag
cttccagccagggtggcctgtgaggacccatccagccccgagccagagcccacagagcca
gaccgtccagtggccgggaagcagattgtgccccaagacaaggacgagcccccccagacc
cggggcaaacgcataaaagtggagcctggccgaggggagactaaagaccctgaggacagt
ggggatgaggcatcatccagtcacctggccccgccacagcccgagtttacttctgtcatc
cgggcgggggccctgaagccagatgtggtacagccgtggggcctggcacctcccggggag
cccccgccgtctgtgttccatgtgggcttcctgccccccaccatgcgaggtctgtgcaca
ccgggcaccatccgctatggccccacggagctgggcctcatgtacccgcacttgcagagg
ctgggcccgggccccgcccgccccgaagccttctaccccgccctgggcctgccctaccct
gggcccacagacaccagggggcagcggaagagggactga
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