Trichechus manatus latirostris (Florida manatee): 101347302
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Entry
101347302 CDS
T05135
Name
(RefSeq) protein capicua homolog isoform X2
KO
K20225
capicua transcriptional repressor
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
101347302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101347302
Transcription factors [BR:
tmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
101347302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
101347302
NCBI-ProteinID:
XP_004388816
UniProt:
A0A2Y9E7R3
LinkDB
All DBs
Position
Unknown
AA seq
1609 aa
AA seq
DB search
MYSAHRPLVPASGAASRGLGMFVWTNVEPRSVAVFPWHSLVPFLAPSQPDPSVQPSEAQQ
PASHPVASNQSKEPAESAAVAHEQPPGGTGSADPGRPPAATCPESPGPGPPHTLVVVEPG
KGPPPTTEEEAPGPPGESRLDSETESDHDDAFLSIMSPEIQLPLPPGKRRTQSLSALPKE
RDSSSEKDGRSPNKREKDHIRRPMNAFMIFSKRHRALVHQRHPNQDNRTVSKILGEWWYA
LGPKEKQKYHDLAFQVKEAHFKAHPDWKWCNKDRKKSSSEAKPTSLGLAGGHKETRERSM
SETGTAAAPGVSSELLSVAAQTLLSSDTKAPGSGSCGAERLHTVGGPGSARPRAFSHSGV
HSLDGREADSQALQELTQMVSGPASYSGPKPTTQYGAPGPFTAPGEGGTLAASGRPPLLP
TRASRSQRAASEDMTSDEERMVICEEEGDDDVIADDGFSTTDIDLKCKERVTDSESGDSS
GEDPEGSKGFGRKVFSPVIRSSFTHCRPLLDPEPPGPPDPPAAFGKGYGPTPSSSSSSPA
SASTSAATSFSLGSGTFKAQESGQGSTAGPLRPPPPGTGGPLTPSKATRFLPTDPATFRR
KRPESVGSLEPPGPSVISAPPSGGGNILQTLVLPPNKEDREGSRARMPSAPAPSLVYGAP
AAPLSRPAATMVTNVVRPVSSTPVPIASKPFPTSSRAEVSPNDTAGARTETGTGSRAPGG
SPLGVSLVYSDKKSAAATSPAPHLVAGPLLGTVGKAPAAVTNLLVGTPGYGTPAPPAVQF
IAQGAPGSGATSGSGTGAGSGPNGPVPLGILQPGALGKPGGITQVQYILPTLPQQLQVAP
APVAAPGTKAAAPGAPAPTTSIRFTLPPGTSTNGKVLAATAPTPGIPILQSVPSALPPKA
QSVSPVQAPPPGGSAQLLPGKVLVPLAAPSMSVRGGGATQPLPLVSPPFSVPVQNGAQPP
SKIIQLRPVPVSTPSGLVPPPSPAALPGPTSQPQKVLLPSSTRITYVQSAGGHALPLGTS
PVSSQAGTVTSYGPTSSVALGFTSLGPSGPAFVQPLLSAGQTPLLAPGQVGVSPVPSPQL
PPACAAPGGPVITAFYPGSPAPTSSAPLAQPSQAPPGLVYTVATSTTTPAAAILPKGPPA
PATATPAPTSPFPSATAGSMTYSLVAPKAQRPTPKAPQKVKAAIASIPVGSFEAGAPGRP
GPVPRQPLEPGPAREPTAPESELEGQPTTPAPPPPPETWAPTARSSPPPPLPAEERTSIK
APEATASKFPSSSSDWRVPGLGLESRGEPPTPPSPAPAPAAGGIIGSSEGNSGRATGETP
ERKEVASTGKKVKVRPPPLKKTFDSVDNRVLSEVDFEERFAELPEFRPEEVLPSPTLQSL
ATSPRAILGSYRKKRKNSTDLDSAPEDPTSPKRKMRRRSSCSSEPNTPKSAKCEGDIFTF
DRTGTDAEDVLGELEYEKVPYSSLRRTLDQRRALVMQLFQDHGFFPSAQATAAFQARYAD
IFPSKVCLQLKIREVRQKIMQAATPTEQPPGAEAPLPGPPPTGTAAAPAPTPSPAGGPDP
TSPGSDSGTASAAPPLPPPPEPGPGQPGWEGAPQASPPPSGSSTAATGR
NT seq
4830 nt
NT seq
+upstream
nt +downstream
nt
atgtactcagcccacaggccgctggtgcccgcgtccggtgcggcctcgcgtggcctcggc
atgttcgtgtggacgaacgtggaacctcgctctgtggctgtgttcccctggcactcctta
gtccccttcctggcccccagccagcctgacccctccgtgcagccgagcgaggcccagcaa
cctgccagccacccagtggcctccaaccagagcaaagaacctgctgagtcggcagctgtt
gctcatgagcagccacccggtgggacaggaagtgctgaccctgggcggccccctgcagcc
acatgtcctgagagcccagggcccggacccccacacactttggtggtggtggaacctggc
aagggtccccctcccactacggaagaggaggcccctggccccccaggagagtcccggctg
gacagcgagacagagagtgaccatgatgatgcctttctctccatcatgtcccctgagatc
cagttgcctctgccgcctggtaaacgccggacccagtccctcagtgccctgcccaaagaa
cgggactcgtcttctgagaaggatgggcgcagccccaacaagcgggagaaggaccatatc
cggaggcctatgaatgccttcatgatcttcagcaagcgacaccgggccctggtccaccag
cgtcaccccaaccaggacaaccggaccgtcagcaagatcctgggcgagtggtggtatgcc
ctggggcctaaagagaagcagaagtatcacgacctggccttccaggtgaaggaggcccac
ttcaaggcccacccagactggaagtggtgcaacaaggaccgaaagaagtccagctcggag
gccaagcccactagcctagggctggctggagggcacaaggagacccgggagcgaagcatg
tcagagacgggcactgctgccgcccctggagtgtcatcagaactcctgtctgtggcagcc
cagacactcttgagctcggacaccaaggctccagggagtggctcctgcggggcagaacgg
ctgcacacagttggggggcctggctcagcccggccccgtgccttctcccacagtggggtc
cacagcctagacggcagggaagcagacagccaggcactgcaagagctgactcagatggtg
tccggtccggcatcctactctggcccaaagcccaccacccagtatggggctccaggcccc
ttcacggctcctggtgaggggggcaccctggcggccagtgggcggcccccactgctgccc
acccgagcttctcgttcccagcgggcagccagtgaggacatgaccagtgatgaggagcgc
atggtcatctgtgaggaagaaggggatgatgatgtcattgctgacgatggtttcagcacc
actgacattgatctgaagtgcaaggagcgggtgactgacagcgagagtggagacagctct
ggggaggaccctgagggcagcaagggctttggccggaaggtgttctcgcctgtgatccgt
tcttccttcacgcactgccgtccactcctggaccctgagccccccgggccgccggatcca
cctgcagcctttggcaagggctacggccccaccccatcctcctcctcgtcctcgcctgcc
tctgcctctacctctgcagccacctccttctccctgggctcaggaaccttcaaggcccag
gagtcagggcagggcagcacagcaggcccactacggcccccgccccctgggactggggga
ccattgacaccttccaaggccacccggttcctcccaacggatcctgccaccttccgacgc
aagagacctgaaagcgtggggagcttggagccaccaggcccctcggttatttcggcacct
cccagcgggggagggaacatcctgcagacactggtcctgcctccaaacaaggaggaccgg
gagggcagcagagcccgcatgccctcggccccggccccatcgctggtctacggggccccg
gcagcccccctgtcccgcccagccgccaccatggtcaccaacgtggtgcggcctgtcagc
agcactcctgtgcccattgcctctaagccctttcccacctccagccgggctgaggtgtct
ccaaatgacacggcgggtgccaggactgagacgggcactgggtcccgggctcctgggggc
tccccgctgggcgtcagcttagtgtattcggacaagaagtcggcagcagccacctcacca
gccccacacttggtggctgggcccctgctgggcactgtgggaaaggcacctgccgctgtc
accaacctgctggtgggcaccccaggttatgggacccctgcgccccctgctgtccagttc
attgcccagggggcccctggcagtggggctacttcgggctctgggacaggtgctgggagt
ggccccaatgggccagtgcccctgggcatcctgcagccaggtgccctgggcaagcctggg
ggaatcacccaggtgcagtacatcctgcccacactgccccagcagcttcaagtggcgcct
gccccagtagcagctcctgggaccaaggcagcagctcctggcgctcctgcacccaccacc
agcatccgttttaccctcccaccgggcacctccaccaatggcaaggtcctggctgccact
gcacccactcctggcattcctatcctgcagtccgtaccttctgctctgccccccaaagcc
cagtcggtgtctcccgtgcaggccccacccccgggtggctcagcccagctgctgcctggg
aaggtactagtgcccctggcagcccctagcatgtcagtgcggggtggaggggccacccag
ccactgcccttggtgagcccgcccttctcggtacctgtgcagaatggtgcccagccaccc
agcaagatcatccagctgaggccagtgccagtgagcacacccagcggcctggtgccgccc
ccgagcccggctgcactgcctggacccacctctcagccccagaaggtcctgctgccctcc
tccaccagaatcacctacgtgcagtcagcaggcgggcacgcgctgcccctgggtaccagc
cctgtgtccagccaggctggaacggtcacctcatacgggcccacgagctctgtagcccta
ggcttcacctcgctggggcccagcggccccgccttcgtgcagcccctgctctcagcaggc
caaaccccactgctggctcctggccaagtgggcgtgtcacctgtccccagcccccagctg
cctcctgcctgcgccgcccctggagggcccgtcatcacggcgttttaccctggcagcccc
gcacccacctcctcagcacccctggcccagccgtcccaggcccccccaggcctggtctac
actgtggccaccagcaccaccacccctgctgctgccatcctgcccaagggcccaccggcc
cctgccactgccaccccagcccccaccagcccctttcctagtgccacagcaggctccatg
acttacagcttagtggcccccaaggcccagcggccaacccccaaggcccctcagaaagtg
aaggcggccatcgccagcattcccgtgggctccttcgaggcaggtgcccctgggcggcct
ggccctgtaccccggcagcccctggagcctggcccagcccgtgagccaactgcccctgag
tctgagcttgaggggcagccaacaactccagcccctccaccacccccagagacctgggct
cccacagcccggagcagccccccgccgcccctgcctgctgaggagcggaccagcatcaag
gcccctgaagccacagccagcaaattccctagctcatcctcagactggcgagtccctggg
ctgggcctggagagtcgtggggagcctcccacccctccgagcccagccccggctccggcc
gctggtggcatcattggcagcagcgagggcaacagcgggagggcgaccggggagaccccc
gagcgcaaggaggtggctagtaccggcaagaaggtgaaggtgcggcccccgcccttgaag
aagacctttgactctgtggacaacagggtcctgtcagaggtggacttcgaagagcgcttt
gctgagctgcctgaatttcggcctgaggaggtgctgccctctcctacgctgcagtctctg
gccacctcgccccgggccatcttgggctcctaccgcaagaagaggaagaactccaccgac
ctggactcggcacccgaggaccccacctcgcccaagcgcaagatgaggagacgctccagc
tgcagctctgagcccaacacccccaagagtgccaagtgcgagggcgacatcttcaccttt
gatcggacaggtacagatgccgaggatgtgctcggggagctggagtatgagaaggtgccg
tactcgtcgctgcggcgcaccctggaccagcgccgggccctggtcatgcagctcttccag
gaccacggcttcttcccctcagcccaggccacagcagccttccaggctcgctacgcagac
atcttcccctccaaggtttgtctgcagctgaaaatccgtgaggtgcgccagaagatcatg
caggcggctactcccacggagcagcccccgggggctgaggccccactccccggaccgccc
cccactggcaccgctgctgcccctgctcccacgcccagccctgctgggggccctgacccc
acctcacctggctcggactccggcacggcctcggccgccccaccactgcctccaccccca
gagccggggcccggacagcctggctgggagggggccccccaggcctcccctccaccctcc
ggctcctccacagctgccacaggcaggtga
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integrated database retrieval system
