Trichechus manatus latirostris (Florida manatee): 101347695
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Entry
101347695 CDS
T05135
Name
(RefSeq) vacuolar protein sorting-associated protein 13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101347695
Membrane trafficking [BR:
tmu04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
101347695
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
ATG2_CAD
RRM_fung
Motif
Other DBs
NCBI-GeneID:
101347695
NCBI-ProteinID:
XP_004383340
UniProt:
A0A2Y9DZ51
LinkDB
All DBs
Position
Unknown
AA seq
3174 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVSLKNLKIKENALHQLDVPFKVKAG
HIGNLSLVIPWKNLYTQPVEAVLEEIYLLIVPSSIIKYDPLKEEKQILEAKQQELKRIEE
AKQKVADQEQPKEEKQDTFVEKLVTQIIKNLQVKISSIHIRYEDDITNRDNPLSFGISLQ
NLSLQTTDQDWVPCLHNETEKLFRKLVRLDNLFAYWNVKSEMFYHYDYDESLNSLKNGIV
NENIVPEDYDFVFRPISAKAKLQMNRRSDFDFSEPKINLDVELHDIAIEFNKPQYFSLME
LLESVDMMTQNLPYRKFKPDVPLHYHAREWWAYAINGVLEVNIRPSLRMWSWKHIRDHRQ
KVKQYKELYKKKLTTKKLTGDILLSLEELEKILDVFNLTLTRQQAEVEVKKAGYKIYKEG
ARDTEDNRGWLDWLWSWSEASSEEQPDVKPGTLEEMLTPDEKAKLYEAIGYSETAVDPTL
PKTFEAMKFFLHLKSMSVVLRENHQKPELLEILIEEFTTLIVQRPGAQAIKFETKIDSFH
VTGLPDDLTKPRLLSSLDDATSLFQIIFEINPLDETVAQRCIIEAEPLEMIYDARTVNSI
VEFFRPPKDVHLTQLTSATLTKLEEFRDKTATGLLYIIETQKVLDLKINLKASYIIIPQD
GIFSPASNLLLLDLGHLKVTSKSRSELPDVKPGEANLEEIMHRAYDSFDIQLTSIQLLYS
RVGENWKEARKLNVSTQHILIPMQFNVELSKAMVVTDLRMPKFKIFGKLPLVSLRVSDKK
LQGIMELVESIPKPEPAPHVPDPGKSDEIQGSNSFGTSQISQKMFPVLELPPPIIEDDSE
EEFFDAPCSPLEEPLQPPTTVKCFRHRQFQKQDCSKNMTECKIRFEVSEVLIQFYHFVGD
CELPVVEFDVLGLGTQIEFRTFDLKANAFLKEFCLKCPEYLDEDKKPVYVITTLDNTMED
LLTLEYVKAEKNVSDLKSTYNNVEQLVKVNFSSLDIHLHTEALLNTMNYFNNILPQSEEK
SAPAHIVENEDKGDVIKKISSKLSKDEDIITLQIFAELSCLRIFIQDQKHKISEIKIEGL
DSEIIMRPKVTEINAKLRNIIVLDSDVMAVYKKAVYITGKEVFSFKMVSYMDATAGSAYT
DMNVADVQVNLTVGCIEVVFVTKFLYSILAFIDNFQAAKQALTEATVQAAGMAATGVKEL
ARRSSRMALDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHMIAESQSNPPPVIDLI
TVKLSEMRLYRSQYINDAYQEVLDILLPLNLEVVVERNLSWEWYQEVPGFNVNAQLKPME
FILSQEDITTIFKTLYGNIWYEKGDSASPAVIKDQSSVTSGVTNASHHSGGTTVVTAAVV
EVHSYASQVKTTINMSFKTDYLTMVLYSPGPEQTSFTDVRDPSLQLAEFRLENIISTLKM
YTDDSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDRKDMMDVRYKRVRDGWVSDLV
FQEMYICASVEFLTTVANVFLEAYSTGTAVETSVQAWSSKEEVPVGQSEKWEINTMIKNP
EFVFVADMTRNDAPALVITTQCEICWKGELENNTMTAAIKDFQVKACPFLPVKRKDNVTT
VLQPCDLFYQATQMGTGPQVIDMSVKSLTLKVSPVIINTVITITSALFTAKETIPKETTS
SAAQLWEKKDTKDLKMWFLEEPDEAENTAPTTELVPKGEMIKMNIDSIFIVLEAGIGHRT
VPMLLAKSRFSGEGKNWSSLINLHCQLKLEVHYYNEMFGVWEPLLEPLEIEQTEDFRPWN
LAFKMKKKTKKAIVESDTEEENYRVPEYKTIFTFYSKDQLNITLSKCGLVMLNNLGKAFT
EAATGSSDVFLKDLAPFMIINSLGLTISVSPSDSFSVLNVPMAKSYTLKNKESLSMDYVR
TKDNDHFSAMTSLSSKLFFILLTPVNHSTADKIPLTKVGRRLYTVRHRESGVERSIVCQI
DAVEGSKKVTIRSPVQIRNHFSVPLSVYEGGTLLGTASPENEFNVPLASYRALLFLKPED
EGYEVCEGIDFEEIIKNDGALVKKKCRPTNPSKKPFIVNIVPEKDNLTSLSVYSEDGWDL
PYVIHLWPAILLRNLLPYKIAYYIEGIEHRVFTLNEGCSAQICTAELDKAKLHLKLLDYL
NHDWKSEYHIKPNQQDIGFINFTCVTEIEKTDLDIAVHVTDNTGQVVVAFHSPYWMVNKT
GRMLQYKADGIHRKHPPNYTKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHG
AVKCKGLNMEYQVGVTIDLSSFNITRIVTFTPFYMIKNKSKYCISVAEEGNEKWLSLDLE
QCIPFWPEDASNKLLIQVERSQGPPKKIYFNKQENCILLRLDNELGGIIAEVNLAEHSTV
ITFSDYHDGAATFLLINHTKDDLVEYKQSSLSKMEDFLPPGKAVFYTWADPAGSRKLKWK
CGKSHGEVTQKDDMMTPINMGKKTIYLVSFFEGLQRIILFTEDPRVFKVTYESEKAELAE
QEIVLALQNVGISLVNNYTKQEVAYIGITSSDAVWETKPKKKARWKPMSVKQTEKLEKEF
KEYTESSPSEDKIIELDTNVTVHLTPSGSNMKILQPHVIAIRRSCLPALKVEYSTSAHQS
SFRVQIYRIQIQNQIHGAVFPFVFYPIRPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRI
KYFKVLIQEMDLRLDLGFVYALAELMAEAEVTEKTEVDLFHKDIEAFQEEYKTVSLVDTS
QVSLYEYFHISPIKLHLSVSLSSGREEAKDSNQGGGLIPVHSLNLLLKSIGATLTDVQDV
VFKLAFFELNYQFHTTPELQSEVLRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVE
AFFYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDY
QQKRREAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKG
LVGAVARPTGGIIDMASSTFQGIKRATETSGEVESLRPPRFFNEDGVIRPYRLRDGTGNQ
MLQVIENGRFAKYKYFTHVMINKTDTLMITKRGVLFVTKGTFGQLTCEWQYSFDEFTKEP
FIVHGRRLRIEAKERVKSVFHTKEFGKIINFKTPEDARWILAKLEEAREPSPSP
NT seq
9525 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtctgtggtcgtggacgttttgaaccggttcttgggggactatgtggtg
aacctggacacgtcccagctcactctgggcatctggggaggagctgtgtccctcaagaat
ctcaaaattaaagaaaatgctctgcatcagctggatgtaccatttaaagttaaagctggt
catataggtaatcttagtcttgtaattccgtggaaaaacctttatactcaaccagttgaa
gctgtattggaggaaatatatttactcatagtgccttcttctataataaaatatgatcct
ttaaaagaagaaaaacaaatcttggaagcaaagcaacaggaactaaaaagaatagaagaa
gcaaaacaaaaagtagctgatcaagaacaacctaaggaggagaaacaggacacttttgta
gaaaaattagttactcagatcataaaaaaccttcaagtgaaaatttccagcatccatatt
cgctatgaagatgatatcacaaatcgagacaacccactgtcatttggtatttcccttcaa
aatctcagcttgcagacaactgatcaagactgggttccatgtttacataatgaaactgag
aaactatttcgtaagttagtccgattggataatctttttgcctattggaatgtgaagtct
gagatgttttatcattatgattatgatgaatcattgaacagtttgaagaatggcattgtc
aatgaaaatattgttccagaagattatgattttgttttccgccccatatctgctaaagcc
aaacttcagatgaatcgtcgatcagattttgacttttctgagcccaaaataaatctggat
gttgagttacatgacatagccattgaatttaataaaccacagtatttcagtcttatggag
cttcttgaatcagttgatatgatgacacaaaatctgccatacaggaaattcaagcctgat
gtacctcttcactaccatgccagggaatggtgggcttatgctataaatggtgttcttgaa
gtaaatattcgtcccagcttacggatgtggtcatggaagcatattagagatcataggcaa
aaagtgaagcagtataaagaactgtataaaaaaaagttaacaactaagaagttgactggt
gacattcttctgtctttggaggagttggaaaagatcctggatgtatttaatttaacttta
acaagacaacaggcagaagttgaggtaaagaaagctggatacaagatttacaaagaaggg
gcaagagatacagaggataatagaggatggttagactggctgtggagttggtcagaagca
agtagtgaagaacaaccagatgttaaacctggaactcttgaagaaatgttgacacctgat
gaaaaagctaaactctatgaagcaattggttatagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagccatgaagttttttcttcatttgaaaagtatgtctgttgttcta
agagaaaatcaccaaaaacctgagctgttagaaattttaatagaagaatttactactctg
attgtgcaaagaccaggagcacaagcaataaaatttgaaaccaaaatagactcatttcat
gttactggcttaccagatgatttaacaaaacctcgtcttctgtcttcattggatgatgct
acctctctcttccaaattatatttgagataaatccattagatgaaactgttgctcaaagg
tgtatcatagaagctgaacctttagaaatgatatatgatgcaagaacagtgaatagtata
gtggaattcttcaggcctccgaaagatgtacacctgacacagctgacttcagcaactttg
acaaaacttgaagaatttcgtgataagacagcaacaggtctactgtatattattgaaaca
cagaaagttcttgatctcaaaattaatttgaaggcatcatatattattattccacaagat
ggaatttttagtcctgcatcaaatctactacttttggatcttggtcatctaaaggtgaca
agtaaaagtcgttcagaattaccggatgtaaaaccaggtgaggccaatcttgaagagata
atgcatagagcttatgattcatttgatattcaacttacgagcatacagctgctttacagc
agagttggtgaaaattggaaagaagcacgaaaactcaatgtatctacacagcatattttg
atacctatgcagttcaatgtggaactctctaaggccatggttgtcacagatttaaggatg
cccaaattcaagatttttggaaagttacctctggtttctttacgagtctcggataaaaaa
ctgcaaggaattatggaattagttgaaagcattccaaaacctgaacctgcacctcatgta
cctgaccctggtaaatcagatgagattcaagggtccaattcttttggaacatcacagatt
tcacagaaaatgtttcccgttttggaacttcctccacccattattgaagatgactcagag
gaggaattttttgatgcaccatgtagtcccttggaagagcctcttcagcccccgactaca
gttaaatgttttagacacagacagtttcaaaagcaggactgttcaaaaaatatgaccgag
tgtaaaataagatttgaggtatcagaggttttgattcagttttatcactttgttggagat
tgtgaactacctgtggtagaatttgatgttttaggattggggacacaaattgagtttaga
acatttgatttgaaagcaaatgcttttttgaaagagttctgcttaaaatgcccagagtac
ttggatgaagacaagaaaccagtttatgtgattacaacactggataacaccatggaagat
ctgttaacactggaatatgtgaaggcagaaaagaatgtgtcagacttgaagagtacctat
aacaatgttgagcaactggtcaaggtgaatttttcttctttggatattcatttacatact
gaagcacttctgaataccatgaattattttaataatatccttccacaatcagaggagaaa
tcagccccggcgcatattgtggagaatgaagacaaaggggatgtcatcaaaaaaatatct
tctaaattatccaaggatgaagatattattaccttgcagatttttgcagaattgtcatgt
ttacggatttttattcaagaccagaaacataaaatttctgaaattaaaattgaaggactt
gattctgaaataattatgagacctaaagtaactgaaataaatgcaaaactaagaaatata
attgttttggattctgatgtaatggctgtatacaaaaaggctgtttatatcactggaaaa
gaagtctttagcttcaaaatggtttcttacatggatgcaactgctggttctgcatataca
gacatgaatgtggctgacgttcaggttaatttaactgttggttgcattgaagtagttttt
gtcacaaaatttctgtattctatattggcttttatagacaactttcaagcagccaaacaa
gccttgactgaggcaactgttcaggcagcaggaatggctgctactggtgtaaaagagctg
gcacgaaggagttctagaatggcactggatgttaacatcaaagccccggttgtggtcatc
ccacagtctccagtttctgaaaatgtttttgttgctgattttggactaattacaatgaca
aatacattccatatgatagcagagagtcagagcaatcccccgcctgttattgatttgata
acagtaaaactgagtgaaatgcgactatacaggtctcaatatattaatgatgcataccag
gaagtactggatatactactgccattaaatcttgaggtggttgttgagcgaaatttatcc
tgggagtggtaccaggaggttcctggttttaatgtaaatgctcagctaaagcccatggag
ttcattctcagtcaagaagatataacaactatttttaaaacattgtatggcaatatatgg
tatgaaaaaggtgacagtgcctcccctgctgtaataaaagaccagtctagtgttactagt
ggagttactaatgcttcacaccattcaggaggaacaactgtggtgacagctgctgtggta
gaagtacattcatatgcctctcaagttaagacaacaataaatatgagtttcaagacagac
tatctcaccatggtactgtatagtccaggtcctgaacagacttcctttacagatgttcgt
gatccttctctgcaacttgctgagtttagattggagaatattataagtactttaaaaatg
tatacggatgactcaacgttttcttctttctcattaaaaaactgtattttagatgataag
aggcctcatgtcaagaaggcaactcctagaatgataggactgacagttgggtttgacaga
aaggacatgatggatgtacggtacaagcgagtcagagatggttgggtgtctgatttagtc
tttcaggaaatgtatatttgtgcaagtgtggaatttctgacgacagttgcaaatgtcttt
cttgaggcctacagcacaggcactgctgtagaaaccagtgttcaagcatggtcttctaag
gaagaagtgcctgtagggcaatcagagaaatgggaaattaatactatgattaaaaatcct
gaatttgtgtttgtggctgacatgacaagaaatgatgccccggccttagtcattaccaca
cagtgtgaaatttgttggaaaggcgaacttgaaaacaatacaatgactgctgccattaaa
gatttccaagtgaaagcatgcccatttcttccagtcaagagaaaagacaatgtaactact
gttttgcagccctgtgacttattttatcaggctactcagatgggtacaggcccgcaagtg
attgatatgtcagtaaaatccctgacactaaaggtttcaccagttatcataaacaccgtg
attaccataacttcagcactttttacagctaaggaaaccattcccaaagaaactacttct
tctgcagcacaattatgggaaaagaaggatacaaaggatttaaaaatgtggttccttgaa
gaaccagatgaagctgaaaacacagcccccacaactgaattggtacccaaaggagagatg
ataaaaatgaacattgattctattttcatagttctggaggctggaattggtcatagaaca
gtgcctatgcttttggcaaagtcacgtttttcaggggaaggcaaaaactggagttcccta
ataaatcttcattgtcaacttaagctagaagtgcattattacaatgaaatgtttggtgta
tgggagcctttgctggaacccttagaaattgaacagacagaggattttagaccatggaat
cttgcattcaagatgaaaaagaaaacaaagaaagccattgttgaatcagatactgaagaa
gaaaactacagagtgccagaatataaaactatcttcactttctattcaaaagatcaacta
aacattacattatccaagtgtggccttgtaatgttaaacaatttaggcaaggcatttaca
gaagctgctactggatcttcagatgtcttcttaaaggatttagcaccatttatgattata
aattctcttggacttactatctctgtttcaccaagtgattcctttagtgtactcaacgtt
cctatggcaaaatcatatacattgaaaaataaggagagtttaagtatggattatgttcga
actaaggacaatgaccatttcagtgcaatgaccagcctaagcagcaagcttttcttcatt
cttcttacacctgttaaccactctactgctgataagattcctttaacaaaagtgggacga
cgtctgtacactgttagacacagagagtctggagttgaaagatctattgtttgtcagatt
gatgcagtggaaggaagtaagaaggtaacaattcgctccccagtgcagattagaaatcat
ttttcagtcccactgtctgtttacgaaggcggcactttattgggaactgcttcacctgaa
aatgaattcaacgtacctttagcatcttaccgagcactcctttttctgaagccagaagat
gagggctatgaagtatgtgaaggaattgactttgaagaaattataaaaaatgatggagct
cttgtaaagaagaaatgtagacctacaaacccttccaagaaaccatttattgttaatatt
gtcccagaaaaagataatttgacatctctttcagtgtattcagaagatggttgggactta
ccatacgtaatccatttatggccagctattctactccgaaatcttcttccttacaaaatt
gcttattatatagaggggattgaacatagggtttttaccctaaatgaaggatgttcagcc
cagatttgtacggcagagttggataaagctaagctacatttaaaattacttgactatctt
aatcatgattggaaaagtgaatatcacataaaacctaatcaacaagacattggtttcatc
aactttacctgtgttacagaaatagaaaagactgatttagatattgctgtccatgtgact
gacaatactggccaggtggttgtggcatttcatagtccttactggatggtcaataaaact
ggccgaatgttacagtacaaagcagatggaattcatcgaaagcatccacctaattataca
aagccagttctcttttcttttcagccaaagcacttttttaataacaataaggttcagctt
atggtaacggatagtgaattgtcagatcagttttcaattgataccgttggtagtcatgga
gctgttaaatgtaagggcctgaatatggaatatcaagttggtgtcactatagacctcagc
agttttaatattaccaggattgtgacatttacccctttttatatgattaaaaacaaaagc
aaatattgtatatcagtggctgaggagggaaatgaaaaatggctctctcttgatttggag
cagtgtatccccttttggcctgaggatgcttctaataaacttcttattcaagttgaaaga
agtcaaggtcctcccaaaaagatatattttaacaagcaagaaaactgtattttattgcgt
cttgataatgagcttggaggcattatagcagaagttaatttggctgagcattctacagtt
attacattttcagattatcatgatggagcagctacattcctgttaataaatcacaccaag
gatgacctggttgaatacaagcaaagttctctcagtaaaatggaagacttcctccctcct
ggaaaagcagtattttatacatgggctgatccagctggctctagaaaactgaagtggaaa
tgtggaaaaagccatggtgaagtaacacaaaaggatgatatgatgacacctataaatatg
gggaaaaagaccatttatttagtttcattctttgaaggcttacaacgcattattttattc
actgaagatccaagggtatttaaagtaacgtatgaaagtgagaaagcagagttagcagag
caagagattgtgttggcgttacaaaatgttggaatttctctcgtcaacaattacacaaaa
caagaagtagcctatatcggcattacaagttctgatgcggtttgggagacaaagcccaag
aagaaggcaagatggaagcctatgagtgtaaagcaaactgagaagttagagaaagaattt
aaggaatatactgaatcttcaccttcagaagataagattattgagttggacactaacgtt
acggttcacttaacacctagtggtagtaacatgaaaattctgcaaccacatgtaatagct
atacggagaagttgtcttccagcattaaaggtggaatatagcacatctgcacatcagtcg
tcatttagagttcaaatttacagaatacagatccaaaaccagatacatggtgctgtattt
ccatttgtgttttatcctattagacctcccaagtcggtcaccatggattcagcaccaaag
ccctttacagatgtcagtattgttatgagatctgcagggcattcccaaatatcacgtatt
aagtatttcaaagtgttgatccaagaaatggatctcagattagacctagggtttgtgtat
gctttagcagaacttatggcagaagctgaggtgactgaaaaaacagaggttgaccttttt
cataaagatatagaagctttccaagaagaatataaaacagtttcattagtggatacatca
caagtcagtctgtatgaatactttcatatatctcctatcaagttacatttaagtgtttcc
ctgagctccggtagagaagaagctaaagactcaaaccaaggtggagggctgattccagtt
cattccttaaatctgttgctgaagagtattggcgccactctaacagatgtccaagatgta
gtttttaagcttgcattttttgaactcaactatcagttccatacaacacctgaactgcag
tctgaagtattaagacattattcgaaacaggccattaagcaaatgtatgtactcattctt
ggacttgacgttttgggaaatccctttggcttaattagagaattttccgaaggtgtagaa
gcatttttttacgaaccttatcagggagccatccagggccctgaagagtttgtggaggga
atggcactaggacttaaggcactagttggtggagctgttggtggattagctggtgctgcc
tccaaaatcaccagtgctatggcaaaaggagtagcagctatgactatggatgaagactac
cagcagaagagaagagaagccatgaacaagcagccagctggtcttagagaaggcatcact
cgtggaggaaaaggcttagtttctggctttgtaagtggcataacaggaattgtgacaaaa
ccaatcaaaggagctcagaaagaaggagcagctggtttctttaaaggtgttgggaaaggg
ttagttggagcggtggcaaggccaactggaggtatcatagacatggctagcagtacattt
cagggaataaaaagagctacagagacttctggtgaagtggagagtctgcgaccgcctcgg
ttctttaatgaagatggagtcatcagaccttacaggttgagggatggtactggaaatcag
atgttacaggtcatagaaaatggaagatttgcaaaatataaatattttacccatgtcatg
atcaataaaacagatacgttaatgataactaaaagaggtgtgttatttgtaaccaaagga
acatttggacagcttacatgtgagtggcaatatagttttgatgagtttaccaaagagcca
ttcattgttcatgggagaagattgcgcatcgaggccaaggaacgggtgaagtctgtattt
cataccaaagagtttgggaaaattattaacttcaagaccccagaggatgctaggtggatc
ctcgcaaagctagaagaagcaagagaaccttccccaagcccctga
DBGET
integrated database retrieval system
