Trichechus manatus latirostris (Florida manatee): 101347788
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Entry
101347788 CDS
T05135
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03082
ATP-dependent chromatin remodeling
tmu03250
Viral life cycle - HIV-1
tmu04714
Thermogenesis
tmu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101347788
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
101347788
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101347788
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101347788
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tmu01009
]
101347788
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101347788
03036 Chromosome and associated proteins [BR:
tmu03036
]
101347788
Protein phosphatases and associated proteins [BR:
tmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101347788
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101347788
SWI/SNF complex
101347788
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101347788
PBAF complex
101347788
SWI/SNF complex
101347788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
101347788
NCBI-ProteinID:
XP_004386214
UniProt:
A0A2Y9E4U1
LinkDB
All DBs
Position
Unknown
AA seq
385 aa
AA seq
DB search
MMMMALSKTFGQKPVKFQLEDDGEFYMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEER
KKIVASSHGKKTKPNTKDHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYL
REQKAKRNSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENA
SQPEVLVPIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASA
IRQQIESYPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSE
LGLGGEFVTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAE
MEKKIRDQDRNTRRMRRLANTAPAW
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatggcgctgagcaagaccttcgggcagaagcccgtcaagttccagctggag
gatgatggcgagttctacatgatcggctccgaggtgggaaactacctccgtatgttccga
ggttctctgtacaagagatacccctcactctggaggcggctagccactgtggaagagagg
aagaaaatagttgcatcgtcacatggtaaaaaaacaaaacctaacactaaggatcacggc
tacacgacactggccaccagtgtgaccctgctgaaggcctctgaggtagaggagatcttg
gatggcaatgacgagaagtacaaggctgtctccattagcacggagccccccacctacctc
agggagcaaaaagccaaaaggaacagccagtgggtgcccaccctgcccaacagctcccac
catctggacgctgtgccatgttccaccaccatcaacaggaaccgcatgggccgcgacaag
aaaaggaccttccctctctgcttcgacgatcacgaccctgctgtcatccatgagaatgca
tcccagcctgaggtgctggtccccatccggctggacatggagatcgatgggcagaagctg
cgggatgccttcacctggaacatgaatgagaagctgatgacccccgagatgttctcggag
atcctctgtgacgacctggacttgaacccactgacatttgtgccggccatcgcctcagcc
atccggcagcagatcgagtcctaccccacagacagcatcctggaggaccaatcagaccag
cgtgtcatcatcaagctgaacatccacgtgggcaacatttccctggtggaccagtttgag
tgggacatgtcggagaaggagaactcgcctgagaagtttgccctgaagctgtgctcggag
ctggggctaggcggggagtttgtcaccaccatcgcctacagtatccggggacagctgagc
tggcaccagaagacctatgccttcagtgagaaccccctgcctacggtggagatcgccatc
cggaacactggcgatgccgaccagtggtgcccgctgctggagaccctgacagacgccgag
atggagaagaagatccgcgaccaggacaggaacacaaggcggatgcggcgtctcgccaat
actgccccagcttggtaa
DBGET
integrated database retrieval system
