Trichechus manatus latirostris (Florida manatee): 101347815
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Entry
101347815 CDS
T05135
Name
(RefSeq) DDB1- and CUL4-associated factor 13
KO
K11806
DDB1- and CUL4-associated factor 13
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmu03009
]
101347815
04121 Ubiquitin system [BR:
tmu04121
]
101347815
Ribosome biogenesis [BR:
tmu03009
]
Eukaryotic type
90S particles
Other 90S particles
101347815
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101347815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sof1
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WDR55
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT122_1st
eIF2A
Beta-prop_IFT140_1st
ANAPC4_WD40
MIOS_WD40
Beta-prop_NUP159_NUP214
KNTC1_N
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
WAC_Acf1_DNA_bd
Motif
Other DBs
NCBI-GeneID:
101347815
NCBI-ProteinID:
XP_004370766
UniProt:
A0A2Y9D9X6
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MKVKMLSRNPDNYVRETKLDIQRVPRNYDPTLHPFEVPREYVRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPKSLATVLSGACDGEVRIWNLTKRKCIRTIQAHEGFVRGICTRFC
GTSFFTTGDDKTVKQWKMDGPGYGEEEEPLHTVLGKTVYTGIDHHWKEAVFATCGQQVDI
WDEQRTSPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKL
GVLTSREKAAKDYNQKLKEKFQHHPQIKRISRHRHLPKSIYSQIQEQRIMKEARRRKEVN
RRKHSKPGSVPIVSEKKKHIVAVVK
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgaagatgctgagccggaaccctgacaactatgtccgcgaaactaagttggac
atacagagagttccaagaaactacgatcctaccttacatccttttgaggttccacgagaa
tatgtaagagctttaaatgctaccaaactggaacgagtatttgcaaaaccattccttgct
tccctggatggtcaccgagatggagtcaattgcttggcaaaacatccaaagagcctggct
actgtcctttctggggcctgtgatggagaggttagaatttggaacttgactaaacgaaaa
tgtatccgtacaatacaagcacatgaaggttttgtacgaggaatatgtactcgcttttgt
gggacttctttttttactactggtgatgacaaaactgtgaaacagtggaaaatggacgga
ccgggctatggggaagaggaagagccattgcatacagtgttaggaaagacagtgtatact
ggaattgatcatcactggaaagaagctgtttttgctacatgtggacagcaagtggacatt
tgggatgaacaaagaaccagtcctatatgttcaatgacctggggatttgacagtataagt
agtgttaaatttaacccaattgagacatttctcttgggaagttgtgcttctgacaggaat
atagtactatatgatatgaggcaagctacccctctgaaaaaggttattttagatatgaga
acaaatacaatctgttggaaccctatggaagctttcatttttactgcagcaaatgaagat
tacaacttatatactttcgacatgcgtgcacttgacactcctgtgatggtacatatggat
catgtatctgcagtgcttgatgtggattactctcccactgggaaagagtttgtgtctgct
agttttgataaatctattcgcatctttcctgtggacaaaagtcgaagcagggaagtatat
cacacaaagcgaatgcaacatgttatctgtgtaaaatggacttctgacagcaagtacatt
atgtgtggatctgatgaaatgaacattcgtttgtggaaagctaatgcttctgaaaaattg
ggtgtgcttacatcacgagaaaaagcagccaaggattataatcagaaattgaaggagaaa
tttcagcatcatcctcagataaaacgtatatctcgtcaccgacatctaccaaaatctatc
tacagccagattcaggagcagcgcatcatgaaagaagctcgtcgacgaaaggaagtgaat
cgccgtaaacatagcaagcctggatctgtaccaattgtatcagagaagaagaaacacata
gtggcagttgtgaaataa
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