Trichechus manatus latirostris (Florida manatee): 101347829
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Entry
101347829 CDS
T05135
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD2 isoform X3
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04115
p53 signaling pathway
tmu04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101347829
09140 Cellular Processes
09143 Cell growth and death
04115 p53 signaling pathway
101347829
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmu04121
]
101347829
Enzymes [BR:
tmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101347829
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101347829
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
101347829
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_EML_2
zf-C3HC4_2
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
EIF3I
Beta-prop_WDR19_1st
Beta-prop_TEP1_C
zf-C3HC4
zf-RING_2
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4_3
Beta-prop_DCAF4
zf-RING_5
zf-C3HC4_4
Beta-prop_WDR90_POC16_2nd
RING_XB3-XBAT31
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_Vps41
WD40_like
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
zf-rbx1
zf-RING_10
zf_C2H2_10
Sina_RING
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
101347829
NCBI-ProteinID:
XP_004372902
UniProt:
A0A2Y9DE35
LinkDB
All DBs
Position
Unknown
AA seq
731 aa
AA seq
DB search
MSGSRPAGSGSAGTSPGSSAASSVTSASSSLSSSPSPPSVAASAAALVSGGAAQAAGSGG
LGGPVRPVLVAAAASGSSGGAVSVGLSRLSCAARPSPGIGGSSSSLGSGSRKRPLPTPLC
NGLINSYEDKSNDFVCPICFDMIEEAYMTKCGHSFCYKCIHQSLEDNNRCPKCNYVVDNI
DHLYPNFLVNELILKQKQRFEEKRFKLDHSVSSTNGHRWQIFQDFLGTDQDNLDLANVNF
MLELLVQKKKQLEAESHAAQLQILMEFLKVARRNKREQLEQIQKELSVLEEDIKRVEEMS
GLYSPVSEDSTVPQFEAPSPSHSSIIDSTEYSQPPGFSGSSQTKKQPWYNSTLASRRKRL
TAHFEDLEQCYFSTRMSRISDDSRTASQLDEFQECLSRFTRYNSVRPLATLSYASDLYNG
SSIVSSIEFDRDCDYFAIAGVTKKIKVYEYGTVIQDAVDIHYPENEMTCNSKISCISWSS
YHKNLLASSDYEGTVILWDGFTGQRSKVYQEHEKRCWSVDFNLMDPKLLASGSDDAKVKL
WSTNLDNSVASIEAKANVCCVKFSPSSRYHLAFGCADHCVHYYDLRNTKQPIMVFKGHRK
AVSYAKFVSGEEIVSASTDSQLKLWNVGKPYCLRSFKGHINEKNFVGLASNGDYIACGSE
NNSLYLYYKGLSKTLLTFKFDTVKSVLDKDRKEDDTNEFVSAVCWRALPDGESNVLIAAN
SQGTIKVLELV
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtagccgcccggccggatcgggctccgctgggacgagccctggctcctccgcg
gcctcctcggtgacttccgcctcctcgtccttgtcgtcttccccgtcgcccccttccgtg
gcggcttcggcggcggcgctggtgtccggcggagcggcccaggccgcaggctcgggcggc
ctcgggggcccggtgcggcctgtgttggtggcggccgcagcgtcgggcagcagcggcggg
gcggtgtcggttggcctgtcccggctcagctgcgcggccaggcccagccctggcataggt
gggagcagctctagcctcggcagcggcagcaggaaacgacctctgcccaccccgctctgc
aacgggcttatcaactcctatgaagacaaaagcaacgacttcgtatgccccatctgcttc
gatatgattgaagaagcatacatgacgaaatgtggccacagcttttgctacaagtgtatt
catcaaagtttggaggacaataatagatgtcccaagtgtaactatgttgtggacaatatt
gaccatctgtatcctaatttcttggtgaatgagctcattctcaaacagaagcaaagattt
gaggaaaagaggttcaaattggaccactcagtgagtagcaccaatggccacagatggcaa
atatttcaggatttcttgggaactgaccaagataatcttgatttggctaatgtcaacttc
atgctggagttactagtgcagaagaagaaacaactggaagcagaatcacatgcagcccaa
ctacagatccttatggaattcctcaaggttgcaagaagaaataagagagagcaactggaa
cagatccagaaggagttaagtgttctggaagaggatattaaaagagtggaagaaatgagc
ggtttatactctcctgtcagtgaggatagcacagtgcctcaatttgaagctccctctcca
tcacacagtagcattattgattccacagaatacagccaacctccaggcttcagtggcagt
tctcagacaaagaaacagccttggtataacagcacattagcatcaagacgaaaacgactc
actgctcattttgaagacttagagcagtgctacttttctacaaggatgtctcgtatctca
gatgatagtcgaactgcaagccagttggatgaatttcaggaatgcttgtccaggtttact
cgatataattcagtacgacctttggccacattgtcatatgctagtgatctttataatggt
tccagcattgtgtctagtattgaatttgaccgggattgtgactattttgccattgctggg
gttacaaagaagattaaagtgtatgaatatggcacagtcatccaggatgcagtggatatt
cattaccctgagaatgaaatgacctgcaattccaaaatcagctgtatcagttggagtagt
tatcataagaacttgttagctagcagtgattatgaaggcactgtcatcctatgggatgga
ttcacagggcagaggtcaaaggtctatcaggagcatgagaagagatgttggagtgttgac
tttaatttaatggatcctaaactcttggcttcaggttctgatgatgcaaaagtgaagctg
tggtctaccaacctagacaactcagttgcaagcattgaggccaaggctaatgtgtgctgt
gtcaaattcagcccctcttctagataccatttggctttcggctgtgcagatcactgtgtc
cactactatgatcttcgtaacactaaacagccaatcatggtcttcaaaggacaccgaaaa
gcagtctcctatgcaaagtttgtgagtggtgaggaaattgtctctgcatcaacagatagt
cagctaaagctatggaatgtagggaaaccatactgcctacgttccttcaagggtcatatc
aatgaaaaaaactttgtaggcctggcttctaatggagattatatagcttgtggaagtgag
aacaactctctctacctgtactataaaggactttctaagacattgctaacttttaagttt
gacacggtcaaaagtgttctggacaaagaccgaaaggaagacgatacaaatgaatttgtt
agtgctgtatgctggagggcactgccagatggggagtccaatgtgctgattgctgctaac
agtcagggtacaattaaggtgctggagttggtatga
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