Trichechus manatus latirostris (Florida manatee): 101347918
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Entry
101347918 CDS
T05135
Name
(RefSeq) histone deacetylase 6
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04613
Neutrophil extracellular trap formation
tmu05014
Amyotrophic lateral sclerosis
tmu05034
Alcoholism
tmu05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
101347918
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
101347918
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101347918
09165 Substance dependence
05034 Alcoholism
101347918
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tmu01009
]
101347918
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101347918
04131 Membrane trafficking [BR:
tmu04131
]
101347918
03036 Chromosome and associated proteins [BR:
tmu03036
]
101347918
Enzymes [BR:
tmu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
101347918
Protein phosphatases and associated proteins [BR:
tmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101347918
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
101347918
Membrane trafficking [BR:
tmu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
101347918
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
101347918
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
101347918
NCBI-ProteinID:
XP_023587640
UniProt:
A0A2Y9QWA2
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MTSTGQDSTTTGQGRSRHTPHSPPHNSSVILTSKRGVKKGAVPCSSPSLAEVKKKGRMKK
LSQAAEQDLIMGLQELDLNLEPKVLSGTGLVFDEQLNEFHCLWDDSFPEGPERLHAIKQQ
LTQEGLLDRCISFQARSAKKEELMMVHSLEYIDLMETTQYMNEVELHILANNYDSVYLHP
NSYTCACLASGSVLRLVDAVLGAEVQNGMAIIRPPGHHARHSLMDGYCMFNHVAVAARYA
QQRHDIQRVLIVDWDVHHGQGRQFIFDQDPSILYFSILHYVHGQFWPHLKASNWSATGFS
QSQGYNINVPWNEVGMRDADYIAAFLHILLPVALEFQPQLVLVAAGYDALQGDPKGNMAA
TPAGFAQLTHLLMGLAGGKLILSLEGGYNCRSLAEGVSASLHTLLGDPCPMLESPGAPCL
SARTSISCTLVALEPFWEVLMQSAETLEEDYVENDKEEGPWEPPVPQILAWPVLRARTGL
VYDQRMMSHYNLWDNHHPEMPQRISRIMYHLEELGLAERCLTLPARPATDAELLTCHSAE
YMARLRATENMKTRELHREGASFDSIYICPSTFTCAQLATGAVCRLVEAVLAGEVLNGTA
VVRPPGHHAEWDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFEDD
PSVLYMSLHRYDHGTFFPMGNEGASSQIGQAPGMGFTVNVAWNGPRMGDPEYLAAWHRLV
LPVAYEFNPELVLVSAGFDAAQGDPLGGCQVSPEGYAHLTHLLMGLANGRIILILEGGYN
LTSISESMAACTRTLLGDPPPLLAPLRPPLSGALASISETIHIHHRYWRSLRIKKVEDKE
EETSNSELVTKEPQPANPGSAEGMATPEENILEAGTRKATSASPVEGSTLGQAKSETAVM
ELTQDKSLEAATGGAVLDQTTSEGPVGDTKLASRTDNQTTPSSPVQETTPHISPSNLIES
LRTLELSNKAQKAPDSQTPEEEKLLGEAAGGRRDLDDSMLMGFGDTDKATFYAVTPLPWC
PHLMAVCPIPATGLDVTQPCRDCGSLQENWVCLSCYQVCCGRYINAHMIQHHEDSGHPLV
LSFVDLSTWCYHCQAYVHHQALLDVKNFAHQNKFGEDMPQPH
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccggccaagattccaccacaaccggacagggaaggagtagacacaccccc
cactcaccaccccacaactccagcgtcatcctcacctcgaagcgaggtgttaagaagggt
gccgtaccctgctccagccccagtctagcagaggtaaagaagaaaggcagaatgaagaag
ctcagccaagcagcagagcaagacctaatcatggggcttcaagagctggatctgaacctt
gagcccaaggtactgtctggcacaggcttggtatttgatgagcagctaaatgaattccac
tgcctctgggatgacagcttccctgaaggccccgagcggctccatgccatcaagcagcag
ctgacccaggagggcctcctggatcgctgtatctccttccaggctcgatctgccaaaaag
gaggagctgatgatggttcacagcctagaatacattgatctgatggagacgacccagtac
atgaatgaggtggaactccacatcctggcaaacaattatgactcagtctacctgcatcca
aactcatacacatgtgcctgcctggcctcaggctctgtcctcaggctggtggatgcggtt
ctgggggccgaagtacagaatggcatggccatcatcaggcctcctggacaccatgcccgg
cacagtcttatggatgggtattgcatgttcaaccatgtggccgtggctgcccgctatgct
cagcagaggcatgatattcagagggtccttattgtggattgggatgtgcaccatggtcaa
ggaagacagttcatctttgaccaggaccccagcatcctctatttctccatcctccactat
gtgcacggccagttctggccccaccttaaggcctctaactggtccgccacaggcttcagc
caaagccagggatacaacatcaatgtgccttggaacgaggtggggatgcgagatgctgac
tacattgctgcgttcctgcatatcctgctgccagtcgcccttgagttccagccccagctg
gtcctggtggctgctggatacgatgccctccaaggggaccccaagggcaacatggctgcc
actccagcagggttcgcccagctgacccacctgctcatgggtctggcaggaggcaagctg
atcctgtctctggagggtggctacaactgccgctccctggctgagggcgtcagtgcctcg
ctccacacccttctgggagacccttgtcccatgctggagtcccctggcgccccctgcttg
agtgcccgaacttcgatctcctgcactttggtagccctcgagcccttctgggaggtcctt
atgcaatctgctgagaccctcgaggaggactacgtggagaacgacaaggaggaggggccg
tgggagccccctgtgccccaaatcctggcctggccagtgctgcgcgctcgcacggggctg
gtctatgaccagcgtatgatgagtcactacaacttatgggacaaccaccaccccgagatg
ccccagcgcatctcgcgaattatgtaccatctggaggagctgggcctcgctgagcgctgc
ctcaccctgcctgcacgccctgccacagatgctgagctgctcacctgccacagtgctgag
tacatggctcgtctgcgagccacggagaacatgaaaacccgggagctgcaccgtgagggc
gccagctttgactccatctacatctgccccagcaccttcacctgtgcgcagctcgccact
ggtgctgtatgccgcctagtggaggctgtgcttgctggagaggtactgaatggtactgcc
gtggtgcgccccccaggacatcatgcagagtgggatgctgcgtgcggtttctgctttttc
aactctgtggcggtggctgctcgccatgcccaggccatcagtgggcatgccctgcggatc
ctgattgtggattgggacgtccatcatggtaatggaactcagcacatatttgaggatgac
cccagtgtgctctacatgtcccttcaccgctatgatcatggcaccttcttccccatgggg
aatgagggtgccagcagccagattggccaggcccccggcatgggcttcactgtcaacgtg
gcctggaatgggccccgcatgggtgaccccgagtacctggctgcctggcatcgtctggtg
cttcccgttgcctatgagtttaacccagaactggtgctggtctcagctggctttgacgcc
gcacagggagaccccttggggggttgccaggtgtcacctgaaggctatgcccacctcacc
cacctgctgatgggccttgccaacggccgcattatcctaatcttagagggtggctataac
ctgacatccatctcagagtccatggctgcctgcactcgcaccctccttggggacccacca
cccctgctggcccctctgcggcccccactatcaggggccctggcctccatctctgagact
atccacatccatcacagatactggcgtagcttgcggatcaaaaaggtagaggacaaggag
gaggaaacctccaattctgagctggtcaccaaggagcctcaaccagccaatcctgggtca
gccgaggggatggccacgccagaagaaaacattctggaagcaggcacgaggaaggctacc
tcagcatcacccgtggaagggtccactctaggccaggctaagtcggagacagccgtgatg
gagctcactcaagacaagtccttggaggcagccaccggcggggctgtgctggaccagacc
acctcagaggggcctgtgggggacaccaagctagcttcacgcactgacaaccagaccacc
ccgtcctcacctgtgcaggaaaccacccctcacatatcacccagtaacctgattgagagt
ctcaggaccttggaactaagcaacaaggctcagaaggccccagattctcagaccccagaa
gaggagaagctactaggagaggcagctggcggtcgtcgggacctggatgattccatgctg
atgggctttggggacactgacaaggccaccttttatgctgtgacaccactgccctggtgt
ccccatttgatggcagtctgccccatacctgcaacaggcctggacgtgacccaaccctgt
cgggactgtggatccctccaggagaattgggtgtgtctgtcttgctatcaggtctgctgc
ggtcgttacatcaatgcccatatgatccaacaccatgaagactcaggacacccgctagtt
ctcagcttcgttgacctgtctacctggtgttaccactgtcaggcctatgtccaccaccag
gctctcctagatgtgaagaatttcgcccatcagaacaagtttggggaagacatgcctcaa
ccacactaa
DBGET
integrated database retrieval system
