Trichechus manatus latirostris (Florida manatee): 101348078
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Entry
101348078 CDS
T05135
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3 isoform X1
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101348078
Enzymes [BR:
tmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
101348078
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
101348078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
AAA_19
T2SSE
Pua-like
UvrD-helicase
YxiG
Motif
Other DBs
NCBI-GeneID:
101348078
NCBI-ProteinID:
XP_004372477
UniProt:
A0A2Y9DD95
LinkDB
All DBs
Position
Unknown
AA seq
2196 aa
AA seq
DB search
MALPRLTGALRSFSNVTKQDNYNEEVADLKTKRSKLYEKNLDLGLTWKKIVKFLNENLDK
NEVQTVNEDLKDILQAAKQIVGMENGREAVESGAAFLFKTFYLKNFVGHKETKAIKQMFG
PFPSSSATAACNATSRITSHFSEVNLTALVRMTEEENREGVLFGKNIAFSFDMHDLDHFD
ELPINGDAQKIISLDYQKFLNERFQERCTPEVKPVEKANGSFLWCEVEKYLNATLKGMTE
APRIEDLCCTLYDMLASVKSGDELQNELFELLGPEGLELIEKLLQNRIMIVDRFLNSSND
HKLQALQENCKKILGENAKHNYGCQVTIQSEQEKQLMKQYRREEKRVARREKKAGEDGEV
SGEGLMCFDPKELRMQREQALLNARSFPVLSRPREMGIEKIRYPHVYDSQAEAMKTSAFI
AGSKMILPEGIQRDNNKIYEEVKIPYSQPMPVGFEEKPVYIQDLDEIGQLAFKGMKKLNR
IQSIVFETAYNTNENMLICAPTGAGKTNIAMLTILHEIRQHLQQGVIKKNEFKIVYVAPM
KALAAEMTKYFSRRLEALGIVVKELTGDMQLSKSEILRTQMLVTTPEKWDVVTRKSVGDV
ALSQIVRLLILDEVHLLHEDRGPVLESIVARTLRQVESTQSMIRILGLSATLPNYLDVAM
FLHVNPYIGLFYFDGRFRPVPLGQTFLGIKSANKVQQLNNMDEVCYESVLKQVKAGHQVM
VFVHARNATVRTAMSLLERAKNNGHIPFFLPTQGPDYGHAEKQVQKSRNKQVRELFPDGF
SIHHAGMLRQDRNLVENLFSNGHIKVLVCTATLAWGVNLPAHAVIIKGTQIYAAKRGSFV
DLGILDVMQIFGRAGRPQFDKFGEGIIITTHDKLSHYLTLLTQQNPIESQFLESLADNLN
AEIALGTVTNVEEAVKWISYTYLYVRMRANPLVYGISHKAYQMDATLEKHREQLVIEVGR
KLDKARMIRFEERTGYFSATDLGRTASHYYIKYSTIETFNELFDAHKTESDIFAIVAKAE
EFDQIKVREEELEELDTLLNNFCELSAPGGVENSYGKINILLQTYISRGEMDSFSLISDS
AYVAQNAGRIVRALFEIALRKRWPAMTYRLLNLSKVIDKRLWGWASPLRQFSVLPPHILT
RLEEKKLSVDKLKDMRKDEIGHILHHVNIGLKVKQCVHQIPSVMMEASIQPITRTVLRVT
LSICPDFTWNDQVHGTVGEPWWIWVEDPTNDHIYHSEYFLILKKQVISKEAQLLVFTIPI
FEPLPSQYYIRAVSDRWLGAEAVCIINFQHLILPERHPPHTELLDLQPLPVTALGCEEYE
ALYNFTHFNPVQTQIFHTLYHTDCNVLLGAPTGSGKTVAAELAIFRVFNKYPTSKAVYIA
PLKALVRERMDDWKVRIEEKLGKKVIELTGDVTPDMKSIAKADLIVTTPEKWDGVSRSWQ
NRSYVQQVTILIIDEIHLLGEERGPVLEVIVSRTNFISSHTEKPVRIVGLSTALANARDL
ADWLNIKQMGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPTFQAIRSHSPAKPVL
IFVSSRRQTRLTALELIAFLATEEDPKQWLNMDEREMDNIIGTLRDSNLKLTLAFGIGMH
HAGLHERDRKTVEELFVNCKVQVLIATSTLAWGVNFPAHLVIIKGTEYYDGKTRRYVDFP
ITDVLQMMGRAGRPQFDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSDHLNAEI
AGGTITSKQDAMDYITWTYFFRRLIMNPSYYNLGDVSHDSVNKFLSNLVEKSLVELEHSY
CIEIGEDNRSIETLTYGRIASYYYLKHQTVKMFKEHLKPECSVEELLSILSDAEEYTDLP
VRHNEDHMNSELAKCLPIEVNPHSFDSPHTKAHLLLQAHLSRAMLPCPDYDTDTKTVLDQ
ALRVCQAMLDVAANQGWLVTALNITSLVQMVVQGRWLKDSSLLTVPNIEQHHLHLFRKWK
PVIKGPCAGYHGPIECLPELIHACEGKDHVFGSIVQSELQPAKVKQAWNFLSRLPVIDVS
LSIKGWWNDSGEGQNELSIPTLVSDKRDDNKWIKLHADQEYVLQVSLQKVHIGFQKGKQD
SSAVTPRFPKLKDEGWFLILGEVDKRELIALKRVGYVRNHHVTSISFYTPELPGRYIYTL
YLMSDCYLGLDQQYDIYLNVAPASISAEVNMEVSDA
NT seq
6591 nt
NT seq
+upstream
nt +downstream
nt
atggctttacctcgtcttacaggagccttgcgctccttttcaaatgtcaccaaacaagat
aattataatgaagaagtggctgacttaaagacgaagcgatccaaactttatgaaaaaaat
ttagatttgggcctgacatggaagaagatagtaaaatttttgaatgaaaatctggataag
aatgaagtacaaactgtaaatgaagacttaaaagatatattacaggctgcaaaacaaata
gttggaatggaaaatggaagagaagcagttgaaagtggggccgcatttctcttcaagaca
ttttacttgaagaactttgttggtcacaaggagacaaaggcaatcaaacagatgtttggt
ccttttccatcatcatctgccactgcagcttgtaatgccactagtcgaattacttctcat
tttagtgaagtcaatcttactgctcttgtccggatgacagaagaggaaaacagggaagga
gttttatttggtaaaaatatagcattttcatttgatatgcatgatttggaccactttgat
gaactgccaataaatggtgatgcccagaaaataataagcctagattaccagaagtttctg
aatgaacgttttcaagagcgttgtactccagaggtaaagcccgtggaaaaagcaaatggt
tcctttttgtggtgtgaagttgagaagtacttgaatgcaactttaaaggggatgactgaa
gcaccaagaatagaagatctttgctgcactttatatgatatgcttgcttctgttaaaagt
ggtgatgaacttcagaatgagctatttgaacttttgggacctgaaggacttgaacttatt
gagaagctcctccagaacagaattatgattgtggatagatttcttaattcttcaaatgat
cataaattgcaggctcttcaagaaaattgcaagaaaattttaggagaaaatgctaagcat
aattatggttgtcaagtcactattcagtctgaacaagaaaagcagttaatgaaacagtat
cgccgtgaagaaaaaagagttgccagacgtgaaaaaaaggctggagaagacggagaggtt
tcaggagaaggactgatgtgctttgatcctaaggaattgcggatgcaaagagaacaggca
cttctgaatgctaggagctttccagttctgagcaggccgagagagatgggtattgagaaa
atacgttatccccatgtttatgattcccaggctgaagccatgaaaacatcggctttcatt
gctggttcaaagatgattttaccagaaggaatccagagagataataacaagatctatgaa
gaagtaaagattccctacagtcaaccaatgccagttggctttgaggaaaagccagtttat
atccaagacttagatgagattgggcagctggcttttaaaggaatgaagaaactcaataga
atccagtcaatagtgtttgagactgcttacaacaccaatgagaacatgctgatttgtgcc
cctactggagctgggaagaccaacattgcaatgcttacaatattgcatgaaattcgccaa
catcttcaacaaggtgttatcaaaaagaatgaatttaagattgtatatgttgctccaatg
aaagccttggcagctgaaatgacaaaatacttcagcagacgtctagaggcactgggcatt
gttgtgaaagaattgactggtgatatgcagttgtcaaaatctgaaattttacgtactcag
atgcttgtgaccacaccagaaaaatgggatgtagttacaagaaagagtgttggggatgta
gctctttcccagattgtcaggcttcttattcttgatgaagtccatttgctgcatgaagat
agaggaccggtattagaaagcatagttgcacgtactttacgacaggttgaatccacacag
agtatgataaggatacttggactctctgcaactttacccaactacctcgatgttgctatg
tttttacatgttaatccctacattggacttttctactttgatggccgttttcgaccagta
cctcttggacagacatttttggggattaagagcgcaaataaggtgcagcagttgaataac
atggatgaagtatgttatgaaagtgttttgaaacaagtaaaggctggacatcaggtgatg
gtgtttgtacatgctcgaaatgccactgtaagaacagcaatgtctctactagaaagagca
aaaaataatggccacattcccttctttttgcctacccaaggacctgactatggacatgca
gaaaaacaagtgcaaaagtcaagaaataagcaagtacgagaattattcccagatggtttt
agtattcatcatgcaggaatgcttcggcaggacagaaatttggttgaaaatttgttttct
aatgggcatatcaaagtcctagtctgtaccgctaccttagcctggggtgtcaatcttcct
gctcatgctgttattattaagggaacacaaatatatgctgcaaaaagaggctcctttgtt
gatcttggaattttagatgtcatgcagatatttggtcgagctggaagaccacaatttgac
aaatttggggaaggaatcatcataacaacgcatgataaactcagccattatctcactttg
ctcactcaacaaaacccaattgagagtcagtttctagaaagccttgcagacaacctaaat
gcagagattgctctgggaacagttactaatgtggaagaagcagtgaagtggataagttac
acttatctttatgtacggatgagagcaaatccattagtatatggcatcagtcacaaggct
tatcagatggatgcaacattagaaaaacatcgagaacagctggtcattgaagttggacga
aaactagacaaagctcggatgattcgttttgaggagcgaactggatatttttccgccacc
gatttgggtagaaccgccagtcactactatattaaatacagcaccattgagacttttaat
gaactctttgatgctcacaaaacagaaagtgatatctttgctatagtcgccaaagctgaa
gaatttgatcaaatcaaggtcagagaagaagaactagaggagttagatactttattgaac
aatttctgtgaactctcagctcctgggggtgtagagaacagttacgggaaaataaacatc
ctacttcaaacttatatcagccgaggagaaatggacagtttctctcttatatcagattct
gcatatgttgcacagaacgcaggtagaattgtccgtgctctttttgaaattgctctgagg
aaacgatggcctgccatgacctacaggctcctgaatcttagtaaagtcatcgacaagagg
ctttggggttgggctagccctttgagacaattttcagtcttaccaccacacattctcaca
agattagaagaaaaaaaacttagtgtggataagctgaaagacatgaggaaagatgaaata
ggtcacatactgcatcatgtgaatattggacttaaggtcaaacagtgtgttcatcagatt
ccttctgttatgatggaagcgtccattcagcccatcacacggactgtcctccgggtgaca
ctcagcatctgtcctgatttcacatggaatgatcaggtccatgggacagtaggagaaccc
tggtggatttgggtagaagatcctacaaatgatcatatttatcattcagagtatttttta
attctaaaaaaacaggtcattagtaaagaagctcaactactggtatttacaatccctatt
tttgagcctcttccttcccaatactacatccgagcagtgtctgataggtggttaggagct
gaggccgtatgtattatcaactttcaacatctgattctaccagagagacatcctcctcat
acagaattactggatcttcaacctttaccagtcacagctttgggatgtgaagaatatgaa
gccctgtataacttcacccactttaaccctgtgcagacacaaatatttcatacactgtat
cacacagactgtaatgtcctacttggagcacccacgggatcagggaagactgttgcagct
gagttagccattttcagagtcttcaacaagtaccccacttcaaaggctgtatatattgca
cccctaaaggcccttgtacgtgaaagaatggatgactggaaagttagaatagaagaaaaa
cttggtaaaaaagttattgaactaacaggagatgtgactcctgatatgaaatccattgcc
aaggctgaccttatcgtcactacaccagagaagtgggatggagtcagcagaagctggcaa
aataggagctatgttcagcaagtcactattctcatcatagatgagatccatctgctcggg
gaggaaagaggtcctgttctagaggtcatcgtatctcgaacaaatttcatctcatcgcac
acagaaaagcctgttagaatagttggtctttccactgccttagctaatgctagagacctt
gctgactggctcaatattaagcagatgggcttattcaacttccgaccatctgtacgccca
gttccactggaagttcacattcaaggcttcccaggtcaacattactgtcctcgtatggct
agtatgaataaacctacgtttcaagcaattagaagccattctccagccaaacctgttttg
atatttgtctcttcgaggcgtcagactcgccttactgctttagaattgatagcctttctg
gctactgaagaagatccaaagcaatggctgaatatggatgaaagagagatggacaacatc
attggaacattaagagattccaacctgaagctgacacttgcttttggaataggaatgcat
catgctggactacatgagagggaccgaaaaacagtagaggaactgtttgtgaactgtaaa
gttcaggttctaattgctacaagcacattagcctggggtgtaaactttccagctcattta
gtaattattaagggaacagaatattatgacggaaaaacaagacgttatgtggattttccc
attacagatgtactccagatgatggggcgtgctgggaggcctcagtttgatgaccaaggc
aaagctgtaattctggtccatgacataaagaaagacttttacaaaaaatttctttatgaa
cctttcccagtagaatcaagcttattaggagtgctctctgaccatttaaatgcagagatt
gctggtggcacaataacatctaagcaggatgcaatggattatatcacctggacttacttc
ttccgacgtcttatcatgaaccccagctactacaatttgggtgatgtgagccatgattct
gtgaacaaatttctgtctaatctggttgagaagtccctggttgaattggaacattcctat
tgtattgaaattggagaggacaatcggagcattgaaactctgacatatggccgaattgcc
tcctattactatttgaagcaccaaacagttaaaatgttcaaggagcatttgaaaccagaa
tgcagtgttgaagaattgctttccattctgagtgatgcagaagaatacacagatttgcca
gtaagacacaatgaagatcatatgaatagtgaactggcaaaatgtcttcccattgaagta
aatcctcattcatttgacagtccccacaccaaagcacatctcctgctacaggcacatctc
agccgagccatgctgccctgcccagattatgacactgataccaaaactgtcttggaccaa
gctctcagagtatgccaggcaatgctggatgtggctgccaaccagggctggctggtgact
gccctgaatatcaccagtctggttcagatggttgtccagggtcggtggttaaaagattct
tctcttcttacagtaccaaacatagagcagcatcatcttcaccttttcaggaaatggaag
ccagttattaagggcccatgtgctggttaccacggccccattgagtgccttcccgagctg
atccatgcctgtgaagggaaagaccatgtattcggctccatcgttcaaagtgagctgcag
ccagcaaaagtgaagcaggcatggaatttcttatctcgcttgccagtgatagatgtcagc
ttgagtattaaaggctggtggaatgactcaggtgaaggacagaatgaactatctatccca
actctggtttcagacaaacgagatgacaacaaatggatcaaattgcatgctgaccaagag
tatgtgcttcaagtcagtttgcagaaagtccacatcgggttccagaagggaaagcaagac
agctctgcagttacccctcgatttcccaaattaaaagatgaaggatggtttttgatatta
ggagaagtggataagagagaacttattgctttgaaaagagtaggatatgttcgcaatcat
catgttacttccatttctttttatacccccgaattacctggaaggtatatctacacactg
tatctcatgagtgactgctaccttggcctggaccagcagtatgacatttatctcaatgtc
gcaccagcaagcatttccgcagaggtcaacatggaggtctctgatgcctga
DBGET
integrated database retrieval system
