Trichechus manatus latirostris (Florida manatee): 101348222
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Entry
101348222 CDS
T05135
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03015
mRNA surveillance pathway
tmu05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
101348222
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
101348222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101348222
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
101348222
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
AAA_29
Motif
Other DBs
NCBI-GeneID:
101348222
NCBI-ProteinID:
XP_004368955
UniProt:
A0A2Y9D746
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKSSAVEPGEECDYE
DLKESSKSFSNHQLSGVDQACLYSCLDYMREVLGDAVPDEILIEAVLKNKFDVQKALAEV
LEQDKIQNLKVKSEGAVSSGKIAKGKSVDSQSSRSDSETVPKVTKMTVSGKKQTMGFEVP
GLTAEENGHSFHTPQKGPPSEDTSITSSDVLETVSKSALPSHTIQASEEQSSTPTPVKKS
SKLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQE
SKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKLITLMDAPGHKDFIPNMITG
AAQADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERF
QEITGKLGHFLKQAGFKETDVAFIPTSGLSGENLITRSQSNELIKWYKGLCLLEQIDSFK
PPQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHD
EPVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPRDPIKACTRFRARILIFNIEIPVTKGF
PVLLHYQTVSEPAVIKRLISVLSKSTGEVTKKKPKLLTKGQNALVELQTQRPIALELYKD
FKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaagatgattattgtatttctccatcaacagctgctcagttt
atttattcaagacgtgacaaatcttcagctgttgagccaggagaagaatgtgattatgaa
gatctgaaagaatcctccaaatccttttcaaaccatcagctaagtggagttgatcaagct
tgtctttattcatgccttgattacatgagagaggtacttggagatgctgtaccagatgaa
atattgattgaagcagttctaaaaaacaagtttgatgtgcagaaggctttggcagaggtt
ctggagcaagataaaatacagaacttgaaggtcaagagtgagggagcagtttcttcaggg
aagatagcaaaaggaaaatcagtggattcccagtcatctcgaagtgattctgaaactgtg
ccaaaagttactaaaatgactgtatctggaaagaagcaaactatgggctttgaagtacct
ggactaactgcggaagaaaatggtcatagtttccacacacctcaaaaaggacctcccagt
gaagataccagcattacttcttctgatgttcttgaaactgtttctaaatcagctcttcca
tcccacaccattcaggcatctgaagagcagagttcaacaccaacaccagtgaaaaagtct
agcaagctgaggcagcagatagatgtgaaagcagaactggagaagcgacaaggggggaag
cagctcctcaacttagtggtcattggtcatgttgatgctgggaagagtactctgatgggc
catatgctttatcttctgggtaatgtaaacaaaagaactatgcataagtatgaacaagaa
tctaaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggtgaa
gaaagggaaaggggagtaacaatggatgttggtatgacaaagtttgagaccaaaaccaaa
cttattacgttaatggatgctccaggccataaagatttcatcccaaatatgattacagga
gcggcccaggcggatgtagctgttttagttgtggatgctagcaggggggagtttgaagct
ggatttgagactggaggacaaacgcgagaacatggcctcttagtccgttctctgggagta
actcagcttgcagttgcagtcaataaaatggatcaggttaattggcaacaagaaagattt
caagaaattactggaaaacttgggcactttcttaagcaagcaggttttaaggagactgat
gtagcttttatacctacaagtggtctcagtggtgaaaatttaatcacaagatctcaatca
aatgaactcataaaatggtataaaggactatgcttattagaacaaattgattccttcaag
cctcctcaacgatctattgacaagccttttagattatgcgtatcagatgttttcaaagat
caaggatctggattttgtgtaactggcaaaattgaagctggttatatccagactggtgac
cgactactagcaatgcctcctaacgaaacttgtactgcaaaaggaatcaccctgcatgat
gaacctgtcgattgggcggcagctggagatcacgttagtcttacgttggttgggatggat
atcatcaaaatcaatgttggctgcatattttgtggccccagagatcccattaaagcttgc
actcgtttcagagcccgaatcctcatctttaatattgaaattcctgtcactaaaggattt
cctgtgctgttacactaccaaactgtcagtgagcctgccgttattaaaagactcatcagt
gtcttaagcaaaagcaccggtgaagtcacaaagaaaaagcctaagttgttgactaaaggc
cagaatgcattggtggagctacagacacaaagaccaatcgctcttgagctatacaaagat
tttaaagaactggggaggttcatgctgcgttacagtggttctacaatagctgctggtgta
gtcactgagataaaagaatga
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integrated database retrieval system
