Trichechus manatus latirostris (Florida manatee): 101348346
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Entry
101348346 CDS
T05135
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit isoform X1
KO
K07466
replication factor A1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03030
DNA replication
tmu03420
Nucleotide excision repair
tmu03430
Mismatch repair
tmu03440
Homologous recombination
tmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
101348346
03420 Nucleotide excision repair
101348346
03430 Mismatch repair
101348346
03440 Homologous recombination
101348346
03460 Fanconi anemia pathway
101348346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101348346
03032 DNA replication proteins [BR:
tmu03032
]
101348346
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101348346
Transcription factors [BR:
tmu03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
101348346
DNA replication proteins [BR:
tmu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
101348346
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
101348346
MMR (mismatch excision repair)
101348346
DSBR (double strand breaks repair)
HR (homologous recombination)
101348346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
CATSPERD-E_C
Motif
Other DBs
NCBI-GeneID:
101348346
NCBI-ProteinID:
XP_023586931
UniProt:
A0A2Y9R0C7
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MVSQLSEGAIAAIMQQGDMSIKPVLQVINIRPITTGNSPPRYRLLMSDGVNTLSSFMLAT
QLNSLVEEEQLSSNCICQINRFIVNMLKDGRRVVILMELEVLKSAEAVGLKIGNPVPYNE
GHGQQQVVPTPASAASPPTSKPQQQNGSSGMGSTVSKAFGAPKTFGKAGGTSLVNTAGGT
QSKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSIELVDESGEIRATAFNE
QVDKFFPLIEVNKVYYFSKGTLKIANKQFTAVKNDYEMTFNNETSVIPCEDGHHLPTVQF
DFTGIDDLENKSKDSLVDIIGICKSYEDATKIIVKSNNREVSKRNIYLMDMSGKVVSATL
WGEDADKFDGTRQPVMAIKGARVSDFGGRSLSVLSSSTIIVNPDIPEAYKLRGWFDSEGQ
ALDGVSISDLKSGGIGGSNTNWKTLYEVKSENLGQGDKADYFSCVATVVYLRKENCMYQA
CPTQDCNKKVIDQQNGLYRCEKCDREFPNFKYRMILSANIADFLENQWVTCFQESAEAIL
GQSTAYLGELKEKNEQAFEEAFQNASFRSFTFRIRVKLETYNDESRIKASAVDVKPVDYR
EYGRRLIMNIRKNAMQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtcagccagctgagcgagggggccattgcggccataatgcaacagggagatatgtcc
ataaaacctgtcctccaagtcatcaacatccgtcccattactacagggaatagtccaccc
cgttatcgactgctgatgagtgatggagtgaacactctatcctctttcatgttggcaaca
caactgaactctcttgttgaggaagaacaattgtccagcaactgtatttgccagattaac
cgatttattgtgaacatgctgaaagatggaaggagagtagttattttgatggagttagaa
gttttgaaatcagcagaagcagttggattaaagattggcaatccagtgccctacaatgaa
ggccacgggcagcagcaggtagtccctactccagcctcagcagccagtccaccaaccagc
aaaccccagcaacagaatgggagttcaggaatgggttccactgtatctaaggcttttggt
gccccaaagacatttggaaaagctggaggcaccagcctggtgaacactgctgggggaaca
cagtccaaagtggtacccattgccagcctcaccccttaccagtccaagtggacgatttgt
gctcgtgttaccaacaaaagtcagatccgtacctggagcaattctcgaggggaaggaaag
cttttctctatagaactggttgatgaaagtggtgaaatccgagctactgctttcaacgag
caagtggacaagttctttccccttattgaggtgaacaaggtctattatttctcgaaaggc
accctgaagattgctaacaaacaattcacagctgttaaaaatgactatgagatgaccttc
aataatgagacttctgtgataccctgtgaagatggtcatcatttacctacagttcagttt
gatttcacagggattgatgacctagagaacaagtccaaagactcacttgtagacataatt
gggatctgcaagagctatgaagatgccacaaaaattatagtgaagtctaacaacagagaa
gtttctaagagaaatatctatttgatggacatgtcagggaaggtggtgtctgctactctg
tggggagaagatgctgataaatttgatggtactagacagccagtgatggctatcaaagga
gccagagtttctgattttggtggacggagcctttctgtactgtcttcaagcaccatcatt
gtgaatcctgatatcccagaggcctataagcttcgtggatggtttgactcagaaggacaa
gccttagatggtgtttccatctctgacctaaagagtggaggaataggagggagtaacacc
aactggaaaactttgtatgaggtcaaatcagagaacctgggtcagggtgacaaggcggac
tatttcagctgtgtggcgacagtggtgtatcttcgcaaggagaactgcatgtaccaggcc
tgcccaactcaggactgcaataagaaagtgattgatcaacagaatggattataccgctgt
gagaagtgtgacagagaatttcccaatttcaagtaccgcatgatcctgtcagcaaatatt
gcagattttctagagaatcagtgggtcacttgtttccaggagtctgcagaggccatcctc
ggacaaagcactgcttaccttggagaattaaaagagaagaatgaacaggcatttgaggag
gcttttcagaatgccagctttcgatcttttacattcaggatcagggtcaaactagagacc
tacaatgatgagtcccgaattaaggcgtctgcggtggatgtgaagcctgtggactacaga
gagtatggcagaaggttgattatgaacatcaggaagaacgccatgcagtaa
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