Trichechus manatus latirostris (Florida manatee): 101348355
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Entry
101348355 CDS
T05135
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03440
Homologous recombination
tmu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101348355
03460 Fanconi anemia pathway
101348355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101348355
Enzymes [BR:
tmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
101348355
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101348355
FA (Fanconi anemia) pathway
Downstream FA components
101348355
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
ARCH_RTEL1
CedA
HBB
Motif
Other DBs
NCBI-GeneID:
101348355
NCBI-ProteinID:
XP_023588455
UniProt:
A0A2Y9R212
LinkDB
All DBs
Position
Unknown
AA seq
1256 aa
AA seq
DB search
MMSSLCSEYTIGGVKINFPCKAYPSQLAMMNSIVRGLNSKQHCLLESPTGSGKSLALLCS
ALAWQQSLSGKPVDEGLSKKAEVPLSCCCTCHSKNFTNNDLMNQGTSRHFSSPSTLPSER
NMTSLASQDSPEKNTLAAKLSAKKQASVCRNENDDFQVDKKRIRLLETTQQIRKRHCFEK
EVHHLDAEVASGKPIKLNSPSGNINFFSPKTPPGHCSRCSCSTKEGNSQDSSNAIKKDHG
GKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEVVGNFNRKEKC
MEFLDGKNGKSCYFYHGVHKIRDQQTLQTFQGMHKAWDIEELVSLGKKLKACPYYTAREL
IEDAEIVFCPYNYLLDPQIRESMDINLKEQVVILDEAHNIEDCARESASYSITEVQLWFA
RDELDSMVNNNIRKKDHDPLRAVCYSLINWLEVNSKHLVERDYESSCKIWSGNEMIIHLH
KMGITSATFPILQGHFSAVLQKEEKVSSIHSKEEAREIPVISASTQIMLKGLFMVLDYLF
RQNSRFADDYKVAIQQTYSWINQTDISDRNGFFALPKNKKRSRQKTAVNVLNFWCLNPAV
AFSDIDDRVRTIVLTSGTLSPMKSFSSELGVTFSIQLEANHVINDSQVWVGTIGSGPTGR
NLCATFQHTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKLKERWLSTGLWHNLE
LVKTVIAEPQGGGKTDFDELLQVYYDAVKYKGEKDGALLVAVCRGKVSEGLDFSDDNARA
VITIGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQAYRALNQALGRCIRHKND
WGALILVDDRFRSNPGRYISGLSKWVRQQIQHHSTFESALESLTEFSKKHLKVIDVSIQD
RESIQDNECILEVACLKDNTPTSFLEVESHLSPENPRKDDAKMCVQELQCPKMITKNSSP
PNGIISRKEKNDPVFLEESVQAMKGENKVISRSTSPTFSKQANRVSWSSFHSFGQYFTGK
ILTATPELRTSEDCNFSTSTVKIEKMESKTVLPLTDKCESSSLTVNTSLEPCPQSEIIVS
PIKIDFALTEKNHPKQLLCCEKTLNPDIEMSLVSEETKLSTSNRSFETEAEDESIYFTPE
LYDPVDTDEEKNELVETDRGNRLANINYILAEDLFENKTMKGVDSVSEMKAEDCTHTKLN
RIIHTEESKIDSIDDNIKTTNINELDLGKTHETDIKNFKQSPSKNKGAFLVLGSGT
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcactatgttctgaatatacaattggtggggtgaagattaactttccttgt
aaagcttacccatcacagcttgctatgatgaattctattgtcagaggattaaacagtaag
cagcattgtttgttggagagccccacaggaagtggaaaaagcttagccttactttgttct
gctttagcatggcagcaatctcttagtgggaagccagtggatgagggcttaagtaaaaag
gccgaagtaccattgtcatgttgttgtacatgccattcgaagaattttactaacaatgac
cttatgaaccaaggaacgtcacgccatttcagtagtccaagtacactaccttctgaaaga
aatatgacttcattagcttctcaagattctcctgaaaaaaacacgttggctgcaaagtta
tcagccaaaaagcaggcatcggtatgcagaaatgaaaatgatgattttcaagtagacaag
aaaagaattcgcctcttagaaacgacacagcagattagaaaacgtcattgttttgaaaag
gaagtacaccatttggatgcagaagttgcttcaggaaagcccataaaactgaactctcca
tcaggaaatataaacttcttttccccaaaaactccccctggccactgttctaggtgctct
tgttccactaaagaaggcaacagtcaagattcttcaaatgccattaagaaggatcatgga
gggaaatcgaagatacccaaaatatattttggaacacgcacacacaagcagattgctcag
attactagagagctacggaggacagcgtactcaggggtcccaatgactattctttccagc
agggatcatacttgtgtccatcctgaagtagttggtaactttaacagaaaagaaaaatgc
atggaatttctagatggaaaaaatggaaaatcctgctatttttatcatggtgttcataaa
attagagatcaacaaacattacagactttccaagggatgcacaaggcctgggatatagaa
gaacttgtcagcctggggaaaaaactaaaggcatgtccatattacacggcacgagaactg
atagaagatgctgagatagtcttttgtccctataactatcttctagatccacaaataagg
gaaagtatggatatcaatctgaaagaacaggttgtcattttagatgaagctcataatatt
gaggactgtgctcgggaatcagcaagttacagtataacagaagttcaactttggtttgct
cgagatgaactagatagtatggtaaacaataatataagaaagaaagaccatgatcctctc
cgagctgtgtgctatagtctcattaattggttagaagttaactctaaacatcttgtagaa
agggattatgaatcatcctgtaaaatatggagtggaaatgaaatgatcattcatttacac
aaaatgggcatcacttctgctacttttcccattttgcagggacatttttctgctgtcctt
caaaaagaagaaaaagtctcatcaattcatagtaaggaggaagcaagagaaatacctgtt
attagtgcttcaactcaaataatgctcaaaggactttttatggtacttgattatcttttt
aggcaaaatagcagatttgcagatgattataaagttgctattcaacagacttactcttgg
ataaatcagactgatatttcagatagaaacgggttctttgctctaccaaaaaataagaaa
cgttctcgacagaaaactgcagttaatgtgctaaatttttggtgcttaaatccagctgtg
gccttttcagatattgatgacagagttcggacaattgttttgacatctggaacgttatca
ccaatgaaatcgttttcatcagaacttggtgttacattttctatccagctggaggctaat
catgtcattaatgactcacaggtttgggttggcaccattggatcaggccctacaggacgg
aatctctgtgctaccttccagcacactgaaacgtttgagttccaggatgaagtgggggca
cttttgttatctgtgtgccaaactgtgagccagggaattttgtgtttcttgccatcttac
aagttgttagaaaaattaaaagaacgttggctttccactggtttatggcataatctggag
ttggtaaagacagtcattgcagaaccacaaggaggaggcaaaactgattttgatgagtta
ctgcaggtatactatgatgcagtcaaatacaaaggagagaaagatggagcgctcctggta
gcagtttgtcgtggtaaagtgagtgagggtctggatttctcagatgacaatgcccgtgct
gtcataacaataggaattccttttccaaatgtgaaagatctacaggttgagctaaagcgt
cagtacaatgaccagcattcaaaattgagaggtcttttacctggtcgtcagtggtatgaa
attcaagcatacagggccttaaaccaggccctgggcaggtgtattcgacacaaaaatgat
tggggagcactcatactagtggatgatcgcttcagaagtaacccaggtcgctatatatct
ggactttctaaatgggtacggcaacagattcagcaccattcaacatttgaaagtgcactg
gagtccttgactgaattttccaaaaagcatctaaaggtcattgatgtatccatacaggac
agagagtctatacaggacaatgagtgtatacttgaagtggcctgtttgaaggacaacacc
ccaacttcttttttggaagtagaaagtcatctgtcaccagaaaatcctaggaaagatgat
gcaaaaatgtgtgttcaggagcttcagtgtcctaaaatgataactaaaaattcatctcca
ccaaatggcatcatctccagaaaggagaaaaatgatccagtatttttggaagaatctgtc
caggcaatgaaaggagaaaacaaggtgatttccagatccacaagcccaaccttcagcaaa
caagcaaacagagttagttggtctagctttcattcttttggacagtattttactggtaaa
atactgactgcaacacctgagctcaggacatcagaggactgtaactttagtacttctact
gtcaaaatagaaaagatggaaagtaaaactgttttgccactcactgataaatgtgagtcc
tcatctctgacagtaaacacatcacttgagccatgccctcaatcggaaatcatagtttca
ccaataaagattgattttgctcttactgaaaaaaatcatccaaaacagctgctctgctgt
gaaaaaacgctgaatccggacattgaaatgtctctagtaagtgaagaaactaaactttcc
acttcaaatagatcctttgaaacagaagcagaagatgaatctatctactttacacctgaa
ctttatgatcctgtagatacagatgaagagaaaaatgaactagttgaaactgatagaggc
aatagactggctaatataaattacattttagcagaggacctttttgaaaataaaactatg
aaaggagtggattcagtcagtgaaatgaaagctgaggattgcacacatacaaaattgaat
agaatcatacatactgaagaaagtaaaattgacagcattgatgataatataaaaacaact
aatataaatgagttggatcttggaaaaactcatgaaacagatataaagaactttaaacag
tctccttccaaaaataaaggtgcgttccttgtgttaggtagcggtacttaa
DBGET
integrated database retrieval system
