Trichechus manatus latirostris (Florida manatee): 101348396
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Entry
101348396 CDS
T05135
Name
(RefSeq) syntaxin-16 isoform X1
KO
K08489
syntaxin 16
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
101348396
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101348396
Membrane trafficking [BR:
tmu04131
]
SNARE
Syntaxin (Qa)
Stx-TGN / EE
101348396
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNARE
Syntaxin_2
ATG17_like
Syntaxin
MCPsignal
DUF5345
DUF2116
TRP
DUF6548
Prominin
Motif
Other DBs
NCBI-GeneID:
101348396
NCBI-ProteinID:
XP_004370262
UniProt:
A0A2Y9D906
LinkDB
All DBs
Position
Unknown
AA seq
322 aa
AA seq
DB search
MATRRLTDAFLLLRNNSIQTRQLLAEQVSSHTACSPLHSRSAAALADDRMALVSGLSLDP
EAAVGVTKRLPPKWVDGVDEIQYDVSRIKQKMKELASLHDKHLNRPTLDDSSEDEHAIEI
TAQEITQLFHRCQRAVQALPSRARRGCSEQEGQLLRNVVASLAQALQELSTSFRHAQSGY
LKRMKNREERAQHFFDTSVPLMDDGDDNTLYDRVFTDDQLVLVEQNTLMVEEREREIRQI
VQSISDLNEIFRDLGAMIVEQGTVLDRIDYNVEQSCIKTEDGLKQLHKAEQYQKKNRKML
VILILFVIIIVLTVILVGVKSR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaggcgtttaaccgacgctttcttgttgttgcggaataattccatccaaacc
cggcagctgttagccgagcaagtgagtagtcacaccgcctgcagccctctgcattcacgt
agcgccgctgcgcttgccgatgaccgcatggcactggtgtcaggccttagcttagaccca
gaagcagccgttggcgtgacaaaacggctgccccccaagtgggtggatggagtggacgaa
atacagtacgatgtcagccggattaaacagaagatgaaagaattagccagccttcacgac
aagcacttaaacagacccaccctggatgacagcagcgaggatgagcacgccattgaaata
acggcccaggagatcacgcagctcttccacagatgccagcgggccgtgcaggccctgccg
agccgggcacgccggggctgctcggagcaggaggggcagctgcttcgcaacgtggtagcc
tccctagcacaggctctgcaggagctgtccaccagcttccggcacgcacagtcgggctac
ctcaaacgcatgaagaatcgagaggaaagagcccagcatttttttgatacgtcagtacct
ctgatggatgatggagacgataatactctttatgatcgggttttcacagacgaccagctg
gtgctggtggagcagaacacgctgatggtggaggagcgggagcgggagatccgccagata
gtccagtccatctcggacctcaacgagatttttagggacttaggggcgatgatcgtagaa
cagggtactgtccttgatagaatcgactataacgttgaacagtcctgtatcaaaaccgaa
gatggcttgaaacagcttcacaaggcagagcagtatcaaaagaagaaccgcaagatgctt
gtcatcctgatattatttgtcatcatcattgtcctcaccgtgatccttgtcggcgtgaag
tctcggtag
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