Trichechus manatus latirostris (Florida manatee): 101348698
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Entry
101348698 CDS
T05135
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X3
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013
Nucleocytoplasmic transport
tmu05014
Amyotrophic lateral sclerosis
tmu05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101348698
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
101348698
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101348698
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101348698
03036 Chromosome and associated proteins [BR:
tmu03036
]
101348698
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
101348698
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
101348698
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
101348698
NCBI-ProteinID:
XP_004381985
UniProt:
A0A2Y9DWW1
LinkDB
All DBs
Position
Unknown
AA seq
1799 aa
AA seq
DB search
MFNKSFGTPFGGGTGGFGTTSTFGQNTGFGTTTGGAFGTSAFGSSNNTGGLFGNSQTKPG
GLFGTNSFSQPATSTSTGFGFGTSTGTSNSLFGTASTGTGLFSSQNNAFAQNKPSGFGNF
GTSTSSGGLFGTTNTTSNPFGSTSGSLFGPSSFTAAPTGTTIKFNPPTGTDTMVKAGVST
NISTKHQCITAMKEYECKSLEELRLEDYQANRKGPQNQVGAGTTTGLFGSSSATSSATGL
FSSSTTNSGFAYQNKTAFGTSTTGFGTNPGGLFGQQNQQTTSLFSKPFAQPTTTQNTGFS
FGNTSTLGQPSTNTMGLFGVTQASQPGGLFGTATNTSTGTAFGTGTGLFGQPNTGFGAVG
STLFGNNKLTTFGTSTTSAPSFGTTSGGLFGFGTNTSGSSIFGNKPATGTLGTGLGAGFG
TALGAGQASLFGNNQPKIGGPLGTGAFGGPGFNTTTATLGFGAPQVPVALTDPNASAAQQ
AVLQQHINNLTYSPFGDSPLFRNPMSDPKKKEERLKPTNPAAQKALTTPTHYKLTPRPAT
RVRPKALQSTGTAKSHLFDGLDDDEPSLANGAFMPKKSIKKLVLKNLNNSSLFSPVNRDA
EDLASPSDYPENGERFSFLSKRVDENHQQDGDDDSLVSRFYTNPIAKPIPQTPESAGNKH
NSSSSVDDTIVALNMRVALRNGLEGSSEETSFHDESLQDDREEVENNTYHMHPAGIVLTK
VGYYTIPSMDDLAKITNEKGECIVSDFTIGRKGYGSIYFEGDVNLTNLNLDDIVHIRRKE
VIVYLDDSQKPPVGEGLNRKAEVTLDGVWPTDKTSRCLIKSPDRLADINYEGRLEEVSRK
QGARFKEYRPETGSWVFKVSHFSKYGLQDSDEEEEERPSKTSTKKLKTAPVPPAGQTTPF
QMALNGKPAPPPQSQSPEVEQLGRVVELDSDMVDITQEPVLDSMLEESMPEDQEPVSASI
HIASSLGINPHVLQIMKASLLTDEEDVDMALDQHFSHLPSKADTSQEICSPRLPISASHS
SKPRSLVGGLLQSKFTSGAFLSPSASVQECRTPRASSLMNIPSTSPWSVPPPLTSVFTVP
SPAPEVLLKTVGTRRQPGLVPLEKSVTYGKGKLLMDMALFMGRSFRVGWGPNWTLANSGE
QLSGSHELENHQIADSMEYGFLPNPVAVKSLTESPFKVHLEKLSLRQRKLDEDLQLYQTP
LELKLKHSTIHVDELCPLIVPNPGVAVIHDYADWSKEASGDLMEAQIVKHWSLTWTLCEA
LWGHLKELESQLDEPSEYIQILERRRAFSRWLSHTAAPQIEEEVSLTRKDSPVEAVFSFL
TGKRISEACCLAQQSGDHRLALLLSQLVGSQSVRELLTMQLADWHQLQADCFIQDERLRI
FALLAGKPVWQLSEQKQINVCSQLDWKRSLAVHLWYLLPPTASISKALSMYEEAFQNTSE
GDRYACSPLPSYLEGSGCIAEEEQDSRRPLRDVCFHLLKLYSDRHYDLNQLLEPRSITAD
PLDYRLSWHLWEVLRALNYTHLSEQCEGVLQASYAGQLESKGLWEWAIFVLLHIANSSMR
EKAVRELLTRHCQLSETPESWAKETFLTQKLCVPAEWIHEAKAVRAHMESDKHLEALYLF
KAGHWNCCHKLVIRHLASDAIINENYDYLKGFLEDLAPPERSSLIQDWDTSGLVYLDYIR
VIEMLHRIQQVDCSGYELEQLHTKVTSLCNRIEQIQCYNAKDRLAQSDMAKRIANLLRVV
LSLQHAPDATSDSTPDPQRVPLRLLAPHIGRLPMPEDYALEELRSLTQSYLRELTVGSQ
NT seq
5400 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaatcgtttggaacaccctttgggggtggcacaggaggctttggcaccact
tcaacatttgggcagaatactggctttggcactactactggaggggcatttggaacatct
gcatttggttctagcaacaatactggaggcctgtttggaaattcacagaccaaaccagga
ggattatttggtaccaattcatttagccagccagctacttccacaagcactggttttggg
tttggcacatcaacaggaacatcaaatagcttgtttgggactgcaagcacgggaaccggt
ctcttctcatcccagaataatgcctttgcacaaaataaaccaagtggctttgggaatttt
ggaacaagtactagcagtggagggctctttggaactacaaataccacctctaaccctttt
ggtagcacatctggctccctttttgggccaagtagttttacagctgcgcctactgggact
accattaaattcaaccctccaactggtacagatactatggtcaaagctggagttagcact
aacatcagcaccaagcaccagtgtattactgctatgaaagaatatgaatgcaagtcacta
gaggaacttcgtttagaggattatcaggctaaccggaaaggtcctcagaaccaggtggga
gcaggtaccacgactggcttgtttgggtcttcttcggccacctccagcgctacaggactc
tttagctcctctaccactaattcaggttttgcatatcagaacaaaactgcctttggaact
agtacaactggatttggaacaaacccaggtggtctctttggccaacagaatcagcagacc
accagcctctttagcaaaccatttgcccagcccacaaccacccagaacactggcttttcc
tttggtaataccagcactctgggacagccaagcactaacaccatgggtttatttggagta
acccaagcctcacagcctggaggtctttttgggacagctacaaacaccagcactgggaca
gcatttggaacgggaacaggtctctttgggcagcccaatactggatttggtgctgttggt
tcgaccctgtttggcaataacaagcttactacatttggaaccagcacaaccagtgctcct
tcatttggtacaaccagtggcgggctctttggttttggcacgaatactagtggaagtagc
atttttggaaataaaccagcaactgggactctgggaactggacttggagcaggatttgga
acagctcttggtgctggacaggcatctttgtttgggaacaaccaacctaagatcggaggg
cctctgggtacaggagcctttgggggccctggatttaatactacaacagccactttgggt
tttggagcccctcaggtcccagtagctttgacagatccaaatgcttctgctgcccagcag
gctgtcctccaacagcacatcaataatctaacatactcaccttttggagactcccctctt
ttccggaatcccatgtcagaccctaagaagaaagaagagagattgaagccaacaaatcca
gcagcccagaaggctctcactacacctactcattataaacttacaccccgccctgccacc
agagtccggccaaaggctttacagtcaacaggcacagccaagtcacatctctttgatggg
cttgatgatgatgaaccttccctagccaatggagctttcatgcccaagaagagcattaag
aagttggttttgaagaaccttaataatagcagtctcttttctcctgttaatcgtgatgcc
gaagatctagcttcaccatctgattatccagaaaatggagagagattcagtttcctgagc
aaacgtgttgatgagaaccatcagcaggatggagatgatgattctcttgtgtcacgtttt
tatactaaccctattgccaaacccatccctcaaaccccagagagtgctggaaataaacac
aacagcagtagcagtgtggatgataccattgttgcattaaacatgcgtgttgccttgcga
aatggtctagaaggaagcagtgaagagacctctttccatgatgagtcactgcaagatgat
cgagaagaagtagaaaataatacttaccacatgcatccggcaggtattgttcttactaag
gttggttactatactattccatctatggatgatcttgctaaaattaccaatgagaaaggg
gagtgcattgtatctgacttcactattggtcgtaaaggttatggttcaatatattttgaa
ggagatgtgaatttgacaaatctgaatttggatgatattgtacatattcgaaggaaagaa
gtgattgtctacttagatgatagccaaaaaccacctgtgggtgaaggactaaataggaaa
gctgaagttacattggatggagtttggccaacagataaaacatctcgttgtttaataaag
agtccagatcgacttgctgatatcaactatgaggggagactggaagaggtttcaaggaaa
cagggagctcggttcaaagaatatcggcctgaaactggttcttgggtgtttaaggtctcc
catttttctaagtatggtcttcaggattctgatgaagaggaggaggagcgcccatccaaa
actagtacaaagaagttgaagactgcccctgtgcctcctgcaggccagactaccccattc
cagatggctcttaatggcaaaccagcacctccaccccagagccaaagcccagaagtggag
cagttagggagggttgtggagctggacagtgacatggtagatatcacccaggagccagtt
ttggattccatgttagaagagagcatgcctgaggatcaggaacctgtgtcagcctcaata
cacattgcatcttcgttgggaattaatccacacgttttacagatcatgaaagcatcattg
cttactgatgaagaagatgtagatatggccctggatcaacacttcagccaccttccttcc
aaagcagatacttctcaagaaatctgttctcccagactcccgatttcagcgtcccactca
tcgaaaccccgttcattagttggtggtttactacaatcaaaatttacaagtggagctttt
ctttcaccaagtgcctctgtgcaagaatgtcgtactcctagagcatcatctctaatgaat
attccatccacatccccttggtctgtccctccacccctgacctctgtgtttacagtgccc
agcccagcccctgaggttctgttgaaaacagtgggtacacgcaggcagccaggcctagtc
cctcttgaaaagtctgtcacgtatggcaaggggaaactcttgatggacatggccctattt
atgggacgctcgtttcgtgttggttggggccccaactggactcttgctaatagtggagaa
cagctgagtggctcccatgaactggaaaatcatcagattgctgattctatggaatatgga
ttcctgcccaatccagtagctgttaaatctctaactgagtccccattcaaggttcatttg
gaaaaactcagtttgagacaaaggaagctggatgaggacctgcaattataccagacacct
ctagagctcaaattaaaacatagcaccatccacgtggatgagctgtgtcctctcattgtc
cccaatccgggagttgctgtcattcatgactatgcagattggtctaaagaagcatcagga
gacttaatggaagcacagattgtgaagcactggagcctgacctggacattatgtgaagcc
ctttggggccacctgaaggagcttgaaagccagctggacgagcccagtgaatacattcag
attctggagcgtcgaagagctttctcccgctggctctcccacactgctgcacctcaaatt
gaggaggaagtctccttaacccggaaagacagtcctgtggaggctgtcttcagcttcctc
acgggcaagaggatcagtgaggcctgctgtctggcccagcagtcaggtgatcatcgtctt
gcccttcttttgtcgcagttggtgggtagccagtcagtccgggagctgcttactatgcag
ttggcggattggcatcaactccaggctgactgcttcatccaggatgagagactgcgcatc
tttgccctgttggctggaaaaccggtgtggcagctctcagagcaaaagcaaatcaatgtg
tgctctcagctggattggaaacggtccctggctgtccatctttggtatctgcttccaccc
acagcctccatttccaaagcactcagcatgtatgaagaagcatttcagaatacctctgag
ggtgacagatatgcctgctccccacttccttcatacctggagggctccggctgtatagca
gaagaggagcaagattcacggagaccacttcgagatgtctgctttcatcttctaaaactt
tacagtgacagacattatgacctcaaccagctgctggaacctcgaagcataacagcagac
cccttggactaccgcctaagctggcatttgtgggaagtgctacgtgctcttaactacacc
catctctcagagcagtgtgagggtgtgctgcaggccagctatgctggccaactggagagc
aagggcctctgggagtgggccatctttgtcctgctgcacattgccaactcaagcatgcgt
gagaaggctgtccgagagctgcttacccggcactgccagctatcagagacccctgaatct
tgggctaaggagactttcctgacccagaaactttgtgtgcctgctgagtggattcatgag
gccaaagcggtacgagcacacatggaatctgacaagcacttagaggccctctatttattt
aaagctgggcactggaactgctgccacaaactcgtcatccggcacttagcatctgatgcc
atcattaatgagaactatgactacctgaaggggtttttggaagacctggcacctccagag
cgcagcagcctaattcaggactgggatacatctgggcttgtttatctggactatattcgg
gtcattgaaatgctccaccgtatccagcaggtggattgctccggttatgagctagagcaa
ttacacaccaaagtgacctcactgtgcaaccggatagagcagatccagtgttacaatgcc
aaggaccgcctcgctcagtcagacatggccaaacgtatagcaaacctgctgcgggtggta
ctgagcctccaacatgcccctgatgcaacctccgactcaacgccagaccctcagcgagtt
cctttgcgtctgctggctccccacatcggcaggctccccatgcctgaggactatgccttg
gaagaactgcgcagtctcacacagtcctaccttcgggaactgactgttggaagccagtga
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