Trichechus manatus latirostris (Florida manatee): 101348709
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Entry
101348709 CDS
T05135
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog isoform X1
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tmu03016
]
101348709
Enzymes [BR:
tmu01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
101348709
Transfer RNA biogenesis [BR:
tmu03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
101348709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
Motif
Other DBs
NCBI-GeneID:
101348709
NCBI-ProteinID:
XP_004385792
UniProt:
A0A2Y9E293
LinkDB
All DBs
Position
Unknown
AA seq
481 aa
AA seq
DB search
MAAFAPTPQATSFPAEGRCGYYVEKKKRFCRMVVAAGKRFCGEHAGAAEEENARKRILCP
LDPKHTVYEDQLAKHLKKCNSREKPKPDFFIQDINAGLKDETEIPEQLVPISFLSEEQLE
NLIKKLRKASVGLNSTLKDQIMSHPVLHDALNDPKNGDSATKHLKQQASILGNIEKLKLL
GPRRCFVEFGAGKGKLSHWVDIALKDAEKVHFILVEKVTTRFKVDGKHRKKNSVFERLQI
DIQHLCLNKVPLLIEEKLPVVGIGKHLCGVATDLALRCLLETYAASCEERNEEPLAKRIK
NDKTETEINTLAKEGSEKNVPEKWTPVAGIVIALCCHHRCDWRHYVGKEYFRALGLGAVE
FHYFQRMSSWATCGMRKTSLEASNITTKKKDNQNDEHEVHDDDGYRIADDSADSLPGFLT
IGEKKKIGHLCKLLIDQGRVQYLQQKGFSPALQYYTDPLVSLENVLLTALPSHSSSPEAV
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttttgcgccgaccccgcaagcgactagttttccagctgagggtagatgcggt
tattatgtggaaaagaagaagcggttctgcagaatggtggtggcagcagggaaacggttc
tgtggtgaacacgctggagccgcggaggaagaaaatgctcgaaaaagaatcctgtgtcct
ttagatccaaaacatacagtatatgaagatcaactagcaaagcatttgaaaaaatgtaac
tcaagagagaagccaaaacccgacttctttattcaagatattaatgcgggcttaaaggat
gaaacagaaatacctgagcaattagtgccaatttcttttctatctgaagaacagttggaa
aacttaattaagaaattgagaaaagcaagtgtaggtttgaactccacccttaaagatcaa
attatgtcccatccagtattgcatgatgcccttaatgaccctaaaaatggtgattctgct
accaagcacctgaaacagcaggcttctattttaggtaacattgaaaaattaaagttactt
ggtccaagaagatgctttgttgagtttggagcaggaaagggaaaattatctcactgggtt
gatattgccttaaaagatgctgaaaaagtgcacttcatcctagtagaaaaggttaccaca
agatttaaggtagatggtaaacacagaaagaaaaattcagtatttgaaagacttcaaatt
gatattcaacacttgtgtttgaacaaggttcctttgctaatagaagaaaaactacctgtg
gtaggaattggaaagcatctgtgtggtgtggcaacagatcttgcattacgatgtttgctt
gaaacctatgctgccagttgtgaggaaaggaatgaagaacctttagccaaacgcataaag
aatgataaaacagaaacagaaattaacactttggccaaggaaggaagtgaaaaaaatgtc
ccagagaagtggacccctgtggctggcattgttattgcactctgttgtcaccacaggtgt
gattggagacattatgtgggcaaagaatatttcagggctctaggccttggagcagtggaa
ttccactatttccagcgaatgagtagttgggccacttgtgggatgcggaaaacatctttg
gaagcctcaaatattaccacaaagaaaaaagataatcagaatgatgagcatgaagtgcat
gatgacgacggatacagaatcgcagatgatagtgctgatagtttacctgggtttcttact
attggagaaaagaagaaaataggacatctttgtaaattactgattgaccaaggccgggta
cagtatttacagcagaagggattcagtcctgctttacagtactatacagaccctctggtg
tctttggaaaatgtactgttaacagctctaccaagtcattcttcatcaccagaagcagtt
gcttag
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