Trichechus manatus latirostris (Florida manatee): 101348913
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Entry
101348913 CDS
T05135
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmu03041
]
101348913
Spliceosome [BR:
tmu03041
]
Common components
Common spliceosomal components
General mRNP proteins
101348913
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
101348913
NCBI-ProteinID:
XP_004370446
UniProt:
A0A2Y9D9K4
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaaaagc
agaagtcgtagtcacgaacgaaagagaagcaaaagtaaggaacggaaacgaagtagagat
agagaacggaaaaagagcaaaagccgtgaaaggaagcgaagtagaagcaaagaaaggaga
cggagccgctcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatttaactcctgaggaaagagatgcaaggacggttttctgcatgcagctg
gcagcaaggattcggccaagggatttggaagagtttttctctacagtaggaaaggttcgt
gatgtgaggatgatttctgatagaaattcaagacgttccaaaggaattgcttatgtggag
tttgttgatgttagctcagtgcctctagctataggattaactggccagcgcgtcttagga
gtgccaatcatagtacaggcatcacaggcagaaaaaaacagagctgcagcaatggcaaac
aatcttcaaaagggaagcgctggacctatgaggctttatgtgggctcattacactttaac
ataactgaagatatgcttcgggggatctttgagccttttggaagaatcgaaagtatccaa
ctcatgatggatagtgaaacaggtcgatccaagggatacggatttattacgttttctgat
tcagaatgtgccaaaaaggcattggaacaacttaatggatttgaactagctggaaggcca
atgaaagttggtcatgttactgaacgcactgatgcttctagtgctagttcatttttggac
agtgatgaactggaaaggactggaattgatttgggaacaactggtcgtctccaattgatg
gcaagacttgcagagggtacaggtttgcagattccaccagcagcacaacaggctctgcag
atgagtggctctttggcttttggtgctgtggcagaattctcttttgttatagatttgcaa
accagactttcccagcagactgaagcttcagctttagctgcagctgcctctgttcaacca
cttgcaacacagtgtttccaactctctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggacacagaaattaaggatgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaatgtgtatgtgaagtgcccatca
attgctgcagctattgctgctgtcaatgcgttgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttaccacaacctctttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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