Trichechus manatus latirostris (Florida manatee): 101349035
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Entry
101349035 CDS
T05135
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101349035
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101349035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
101349035
NCBI-ProteinID:
XP_023591279
UniProt:
A0A2Y9RH45
LinkDB
All DBs
Position
Unknown
AA seq
1185 aa
AA seq
DB search
MMQLLQFLLGLWGPGGYLFLSGDCQEVATLTVKYQVLEEVPSGTVIGKLSRELGREERRQ
PEGAVFQVLQLPQVLPIQVDAEDGLLSTGRRLDREQLCRQQDPCLVSFDVLATGDFALIH
VEIQVLDINDHQPQFPKGEQELEISESASLHTRIPLDRAVDPDTGPNTLHTYTLSPSEHF
ALDVIVGPDETKYAELVVVKELDREIHSFFDLVLTAYDSGDPPKSGTSLVKVNVLDSNDN
SPVFAESSLALEIQEDAALGTLLINLTATDPDQGPNGEVEFFLSKHAPPEVLDTFSIDAK
TGQFILRQPLDYEKNPAYEVDVQARDLGPNPIPAHCKVLIKVLDVNDNAPSIHVTWASQS
PLVSEAVPKDSFIALVMANDLDSGNNGLVHCWLSQELGHFRLKRTNGNTYMLLTNATLDR
EQWPEYTLTLLAQDQGLQPLSAKKQLSIQITDANDNAPVFEKSRYEISTRENNLPSLHLI
TVKAHDADLGINGKISYRIQDSPVSHLVAIDSDTGEVTAQRTLDYEQMASFEFRVIAEDR
GQPQLASSVSMWVSLLDANDNSPEVVQPVLNNGKASLSVLVNASTGHLLVPIETFNGLGP
ADVDIPPLATHSSPPFLLTTIVARDADSGANGELLYSIRRGNKACLFVLSPHLGQLFINV
TNASSLIGSEWELEIVVEDRGSPSLQTQALLKVMFVTSVDHLRDLAHEPGALSTPVLTVI
CLVVLLAIFGLILALVMSICRTEKKDNRAYNCREAESTYRHQPKRPQKHIQKADIHLVPV
LRGQVDEPGEVGQPHKDTGKEANTSEGWDPCLQAPFHLTPTLYRTLRNQGNLGALTESQE
VLQDTVNLLFNHPRQRNASRENLNFPEPQPALGQPRSKPLKAAGSPTGRLLGDQGIGEAP
LSPPASSATLRRKRNLNGKMVPEKESGPRQILRSLVRLSVAAFAERNPVEELTMDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYSAKPGSGGRSTVLDTEGTGARVGGQAELDQEEGLL
DPEEDLSVKQLLEEELSSLLDPHTGLALDRLSAPDPAWMARLSLPLTTNYRDNVCSPDAA
AAEEPRTFQTFGKAAGPELSPTGTRLASTFVSEMSSLLEMLLAQSSSVVPVEAASEVLRR
LSVCGRTLSLDLATSGTSGTEAQGAPGGKTGAKGRTCSSSSSRGL
NT seq
3558 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaacttctgcagtttctgctggggctttgggggccaggtggctacttgttcctt
tcaggggattgtcaggaggtggccactctcactgtgaaataccaagtattagaggaagtg
ccgtctggcacagtaatagggaagctgtcccgggaactgggccgggaggagaggcgtcag
ccagagggggctgtcttccaggtcttgcagctccctcaagtgctccccattcaggtggac
gctgaagacggcttgctcagcacggggaggcggctggaccgagagcagctctgccggcag
caggatccctgcctggtttcctttgacgtgcttgccacaggggatttcgctctgatccac
gtcgagatccaggtgctggacatcaatgaccaccagcctcagtttcccaaaggtgagcag
gagctggaaatctctgagagtgcctctctacatacccggatcccgctggacagggctgtt
gacccagatactggccccaacacactgcacacatacactctgtctcccagtgagcacttt
gccctcgatgtcatcgtggggcctgatgagaccaaatatgcagaactcgtggtggtgaag
gagctggaccgggaaatccactcattttttgatctggtgttaaccgcctatgacagtggg
gacccacccaagtcaggcaccagcttggttaaggtcaatgtcctggactccaatgacaat
agcccagtgtttgccgagagctcgctggcactagaaatccaagaagatgctgcccttggt
actctcctcataaacctgactgccaccgaccctgaccaaggccccaacggggaggtggag
tttttcctcagcaagcacgcgcctccggaagtgctagacaccttcagtatcgatgctaag
acaggccagttcattctgcgtcaaccactagactatgagaagaatcctgcctatgaggtg
gatgtccaggcgagagacctgggtcccaatcccatcccagcccattgcaaagttctcatc
aaggttctggacgtcaatgacaatgcccctagcatccatgttacgtgggcctcccagtca
ccactggtgtcagaagctgttcccaaggatagtttcattgctctcgtcatggcaaatgac
ttagactcaggaaacaatggtctggtccactgttggctgagccaagagctaggccacttc
aggctgaaaaggaccaatggcaatacatatatgctgcttaccaatgccacgctggacaga
gaacagtggcccgaatataccctcactctgttagcccaagaccaaggactccagccctta
tcagccaagaaacaactcagcattcaaatcactgatgccaatgataatgcacctgtgttt
gagaagagcaggtatgagatctccactcgggaaaacaatctaccctctcttcacctcatc
actgtcaaggctcatgatgcagacttgggcatcaatggaaaaatctcataccgcatccag
gactccccagtttctcacttggtagctattgactcagacacaggagaggtcactgctcag
aggacactggactatgaacagatggccagctttgagttccgggtgattgcagaggatagg
gggcagccccagcttgcatccagtgtctccatgtgggtcagcctcctagatgccaatgat
aactccccagaagtggttcagcctgtgctcaacaatggaaaagccagcctctcagtgctt
gtaaatgcctccacgggccaccttctggtgcccatcgagactttcaatggcttgggtcca
gctgatgttgacataccaccactggccacccacagctccccgccattccttttgactacc
attgtggcaagggacgcagactcaggggcaaatggagagctcctctacagcattcggagg
ggtaacaaagcttgcctctttgtcctcagcccccacctagggcagctgttcatcaatgtc
accaatgccagcagcctcattgggagcgagtgggagctggagatagtggtagaggaccgt
ggcagtccctccttgcagacccaagccctgttgaaggtcatgtttgtcaccagcgtggac
cacctgagggacttggcccatgagcccggggccctgagcacaccagtactgacggtgatt
tgcctggttgtactactggccatcttcgggttgatcttggctctggtcatgtccatctgc
cggacagagaagaaggacaaccgggcctacaactgtcgggaggctgagtccacgtaccgc
caccagcccaagaggccccagaaacacattcagaaggcagacatccaccttgttcctgtg
ctcaggggacaggtggatgagcctggtgaagttggacagccccacaaggacacaggcaag
gaagcgaatacgagtgaaggctgggacccctgcctgcaggccccctttcaccttactccg
accctgtacagaaccttgcgtaaccaaggcaacctgggagcactgactgagagccaggag
gtgctgcaggacacagttaacctccttttcaaccaccccaggcagaggaacgcctcccgt
gagaacctgaactttcctgagccccagcctgcgttgggccagccacgctcaaagcccctg
aaggctgcaggcagccccactgggagactgctcggagaccagggcattggggaggccccg
ctgagcccaccagcctcctctgcaaccctgaggcggaagcggaatctcaatggtaaaatg
gttcctgagaaagagtcaggcccccgtcagatcctgcggagcctggtccggctgtccgtg
gctgccttcgcagagcggaaccctgtggaggaactcaccatggattctcctcctgttcag
caaatttcccagctgctgtccttgctgcatcagggccaattccagcccaaaccaaaccac
cggggaaataagtactcggccaagcccggcagcggtggcaggagtacagtactagataca
gaaggcacaggtgccagggttggtggccaggcagaactggaccaggaggaggggctcttg
gaccctgaagaagacctctctgtgaagcagctgctagaagaagagctgtcaagcctactg
gatccccacacaggcctggccttggaccggctgagcgcccccgacccagcctggatggcg
aggctctctttgcccctcaccaccaactaccgcgacaacgtgtgctccccggacgctgcg
gccgcggaggagcctcggaccttccagacgtttgggaaggcggcggggcctgagctgagc
cctacgggcacgcggctggccagcaccttcgtttcagagatgagctcactgttggagatg
ctgctggcgcaaagctccagcgtggtacccgtggaagccgcctctgaggtgctgcggcgg
ctgtcggtctgcgggaggaccctcagtctggacctggccaccagcgggacctcaggcacg
gaagcccagggtgccccaggtggaaagacgggggccaagggcaggacctgcagcagtagc
agcagcagaggtctgtga
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integrated database retrieval system
