KEGG   Trichechus manatus latirostris (Florida manatee): 101349083
Entry
101349083         CDS       T05135                                 
Name
(RefSeq) retinoic acid receptor RXR-beta isoform X2
  KO
K08525  retinoid X receptor beta
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03320  PPAR signaling pathway
tmu04659  Th17 cell differentiation
tmu04919  Thyroid hormone signaling pathway
tmu04920  Adipocytokine signaling pathway
tmu04928  Parathyroid hormone synthesis, secretion and action
tmu05200  Pathways in cancer
tmu05202  Transcriptional misregulation in cancer
tmu05207  Chemical carcinogenesis - receptor activation
tmu05216  Thyroid cancer
tmu05222  Small cell lung cancer
tmu05223  Non-small cell lung cancer
tmu05226  Gastric cancer
tmu05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    101349083
  09152 Endocrine system
   04920 Adipocytokine signaling pathway
    101349083
   03320 PPAR signaling pathway
    101349083
   04919 Thyroid hormone signaling pathway
    101349083
   04928 Parathyroid hormone synthesis, secretion and action
    101349083
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101349083
   05202 Transcriptional misregulation in cancer
    101349083
   05207 Chemical carcinogenesis - receptor activation
    101349083
  09162 Cancer: specific types
   05226 Gastric cancer
    101349083
   05216 Thyroid cancer
    101349083
   05222 Small cell lung cancer
    101349083
   05223 Non-small cell lung cancer
    101349083
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    101349083
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:tmu03000]
    101349083
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:tmu03310]
    101349083
Transcription factors [BR:tmu03000]
 Eukaryotic type
  Zinc finger
   Cys4 hepatocyte nuclear factor 4-like
    101349083
Nuclear receptors [BR:tmu03310]
 2. Hepatocyte nuclear factor 4 like
  2B. Retinoid X receptor (RXR)
   101349083
SSDB
Motif
Pfam: Hormone_recep zf-C4 Nuc_recep-AF1
Other DBs
NCBI-GeneID: 101349083
NCBI-ProteinID: XP_004389852
UniProt: A0A2Y9E9W8
LinkDB
Position
Unknown
AA seq 532 aa
MSWAARPPFLPQRHAAGQCGPVGVRKEMHCGVASRWRRRRPWLDPAAAAAAAAAGEQQTP
EPEPGEAGRDGMGDSGRDSRSPDSSSPNPLSHGAPPPSPPGPPLPPSAAASLGGTGAPPP
PPLPPPPLGSPFPVISSSMGSPGLPPPAPPGFSGPVSSPQINSTVSLPGGGSGPPEDVKP
PVLGVRGLHCPPPPGGPGAGKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYSC
RDNKDCTVDKRQRNRCQYCRYQKCLATGMKREAVQEERQRGKDKDGDGEGAGGAPEEMPV
DRILEAELAVEQKSDQGVEGPGGTGGSGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFS
SLPLDDQVILLRAGWNELLIASFSHRSIDVRDGILLATGLHVHRNSAHSAGVGAIFDRVL
TELVSKMRDMRMDKTELGCLRAIILFNPDAKGLSNPSEVEVLREKVYASLETYCKQKYPE
QQGRFAKLLLRLPALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLA
NT seq 1599 nt   +upstreamnt  +downstreamnt
atgtcttgggctgctcgcccgcccttcctcccccagcggcatgccgcagggcagtgtggg
ccggtgggggtgcgaaaagagatgcattgtggggtcgcgtcccggtggcggcggcgacgg
ccctggctggatcccgcggcggcggcggcggcggcggcagccggagaacaacaaaccccg
gagccggaaccgggggaggctggacgggacgggatgggcgacagcgggcgggactctcga
agcccagacagctcctccccaaatcccctttcccacggagcccctcccccttctcctcct
gggccacccctgcccccttcagcagccgcatcccttggaggcactggggctccgccccca
cccccactgccaccacctccactgggctcccccttcccggtcatcagctcttccatgggg
tcccctggtctgccccctccagctcccccaggattctccgggcctgtcagcagcccccag
attaactcaacagtgtcgctccctgggggtgggtctggcccccctgaagatgtgaagcca
ccagtcttaggggttcggggcctgcactgtccaccccctccaggtggccctggggctggc
aaacgtctgtgtgcaatctgcggggacagaagctcaggcaaacactatggggtgtacagc
tgtgagggttgcaagggcttcttcaagcgcaccatccgtaaggacctgacctactcgtgc
cgggacaacaaggactgcacagtggacaagcgccagcggaaccgctgtcagtactgccgc
tatcagaagtgcctggccacaggcatgaagagggaggcggtacaggaggagcgtcagcgg
gggaaagacaaggatggggatggggagggggctgggggagcccctgaggagatgcctgtg
gacaggatcctggaagcagagcttgccgtggaacagaagagtgaccagggcgtcgagggt
cctgggggaaccgggggtagcggcagcagcccgaatgaccctgtgactaacatctgtcag
gcagctgacaaacagctcttcacgctcgttgagtgggcgaagaggattccccacttttcc
tccttgcctctggatgaccaggtcattttgctacgggcagggtggaatgagctcctcatt
gcctccttctcgcaccgatccattgatgtccgagatggcatcctcctcgccacaggtctt
cacgtgcatcgcaactcggcccattccgcaggcgtaggagccatctttgatcgggtgctg
acagagctagtgtccaaaatgcgtgacatgaggatggacaagacagagcttggctgcctg
agggcaatcattctgttcaatccagatgccaagggcctctccaaccccagcgaggtggag
gtcctgcgggagaaagtgtatgcatcactggagacgtactgcaaacagaagtaccctgag
cagcagggacggtttgccaagctgctgctacgtcttcctgctctacggtccatcggcctc
aagtgtctagagcatctgtttttcttcaagctcattggtgatacccccattgacaccttc
ctcatggagatgcttgaggctccgcaccaactggcctga

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