Trichechus manatus latirostris (Florida manatee): 101349410
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Entry
101349410 CDS
T05135
Name
(RefSeq) desmocollin-1 isoform X1
KO
K07600
desmocollin 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101349410
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Major cadherins
101349410
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_pro
RET_CLD1
Cadherin_CELSR2_9th
CADH_Y-type_LIR
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
101349410
NCBI-ProteinID:
XP_004386952
UniProt:
A0A2Y9E4T5
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MAVASAASGSTFCKQLLFSLLVLILFSDACKKISLQVPSHLQAETLVGKVNLEECLKSAS
HILSSDPDFRILEDGSIYTTNDLMLSSKRKSFFILLSDSQRQEQIKIELVLAARENKAGR
KRHTKDTSLKRSKRRWAPIPCSIMENSLGPFPQRIQQIESDTAQNYTIFYSISGPGVDKE
PVNFFYIERDTGYIFCTRSIDREQYQQFSLYGYATTPDGYVPEYPLPIVIVIEDDNDNAP
YFESKLTTFTVLENCKSGTSVGQVTAIDNDEPDTLHTRLRYKILRQIPDHPQHFSVHPNT
GVITTVTSLLDRESCDTYTLIMEVRDMGGQHFGLFNTGTITISLLDENDNLPVFTETSYF
AEVEENRIDVEILRMKVYDNDLPNTPHSKAVYRILRGNENGAFKISTDPNTNEAVLCVVK
PLNYEVHHQIILQVCALNEAQLSKKTNSQTPTTCTTTVTVKVKDRDEGPECRPPVKVIES
KDGLKAGTELIGYKAVDPETGSSEGLRYTKIGDEDNWFEINEITGNLKTVKTLDRESKFV
KNDQYNFSVIARDADGRSCTGTLVVLLEDDNDHAPQITEELTICHTDKDFAVLKPVDPDG
PDNGSPFQFHLDNFASKFWTLESKDGKTAILREKEPLDYGYYSLPIVIKDRHGLSAEHLL
SVRVCDCTTPSDCTMPAKKQRDIKTSNIILGKWAILAMVLGSTLLLCVLFTCFWVTAKRA
EKQCFPEDRAQQNLIVSNTEGPGEEVMEANIRLPTQTSNVCDTSVSVGTLGGQGVKTQQS
FEMVKGGYTLESNKGGGHQTLESNKGVGQGVTDSGRYAYTDWHSFTQPRLGEKVYLCGQA
EEHKHSEDYVRSFNYEGKGSVAGSVGCCSDRQEEEGLAFLDHLEPKFRTLAKTCVKQ
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggctgtggcctctgctgcctcagggagcaccttctgtaagcagctccttttctctctc
ctggttctaatattatttagtgatgcttgtaagaaaatttctcttcaagttccttctcat
cttcaggctgaaacacttgtaggcaaagtgaatctggaagagtgtctcaagtccgccagc
catatcctgtcaagtgatcctgacttcagaattctagaagatggctctatttacacaaca
aatgacctcatgttgtcttctaaaaggaagagctttttcattttactctcagacagtcag
aggcaggaacagataaagatcgaacttgtgctggcagcaagagaaaataaggctggtagg
aagagacataccaaggacaccagccttaagcgcagcaagagacgatgggctcctattcca
tgttcaataatggagaactcattaggtccatttccacaacgcattcaacagatcgagtct
gatactgcacagaattataccatcttttactccataagtggaccaggagtggacaaagaa
cccgtcaatttcttctacatagagagagacactgggtatatattttgtacacgaagcata
gatcgtgagcaatatcaacagttttcgctatatggctatgcaacaaccccagatggttat
gtgcccgagtatccactccccatcgtaatcgtaattgaagacgataacgataatgcaccg
tattttgaaagcaagttgactacgtttactgtgttggaaaattgcaaatctggaacttca
gtgggacaagtgactgccatagacaatgatgaacccgacacattacatactcgtctgaga
tataaaatcttacgacaaatcccagatcatccacagcacttctctgtacatccaaacaca
ggtgtcatcacaacagttacatctttactggatagagaatcctgtgacacgtatacgtta
ataatggaagtgcgagacatggggggccaacattttggtttatttaatacaggaacaatt
actatttcacttttggatgaaaatgacaatttaccagtgttcacagaaacttcctacttt
gcagaggtagaagaaaacagaattgatgttgagattttgcgaatgaaggtgtatgacaac
gatctgcccaacactcctcattcaaaggctgtatacaggatcctacggggaaatgaaaac
ggagccttcaaaatttccacagatccaaatacaaatgaagcagtcttatgtgttgtcaag
ccattgaactacgaagtccatcaccaaattattttgcaagtttgtgcacttaatgaagca
caattgtctaaaaaaacgaactcacagactcctactacgtgcactacaactgtcactgtt
aaagttaaagaccgtgatgagggccctgaatgtcggccacctgtaaaagttattgagagt
aaagatggcctcaaagctggtacagagctcattggatacaaagcagtggatccggaaacg
ggcagtagtgaaggcttaagatatacgaagataggagatgaagataactggtttgaaatt
aatgaaataactggtaacttgaaaactgtaaaaacactggatagagaatcaaaatttgtc
aaaaatgaccaatataatttttcggtgattgcaagggatgcagatggtagatcttgcact
ggaacgttagtagttcttttggaagatgataatgatcacgcaccacaaattactgaagag
ttgacaatttgtcatacggataaagactttgctgttttgaaacctgtagatccagatggg
cctgataatggttcaccatttcaattccatttagataattttgccagcaaattctggact
ttagaatcaaaggatggtaaaactgccattcttcgtgaaaaggagcctcttgattatggc
tattattctctgcctatcgtaataaaagatagacatggtttgtctgcagaacacttatta
tcagtgagagtatgtgactgcacaactccatctgattgtacaatgcctgcgaaaaagcag
agagatattaagacgtcaaatatcatacttggaaaatgggctattcttgccatggtgttg
ggttctacgttgttgttatgtgttctctttacatgtttctgggtcactgctaagagggca
gaaaaacaatgttttcctgaagatagggcccagcaaaatttaattgtatcaaatactgaa
ggacctggagaagaagtgatggaggcaaatattcgacttcccacacagacttccaatgtt
tgtgacacaagcgtgtctgttggcacccttggtggccagggagtcaaaacacagcaaagt
tttgagatggttaaaggaggctacactttggagtccaacaaaggaggtggacaccaaacc
ttggagtccaacaagggagtaggtcagggcgtaacggactctggcagatacgcatacaca
gactggcatagttttacccaacctcgtcttggtgaaaaggtgtatctgtgtggacaggct
gaggagcataagcattctgaagactacgttcgttcatttaattatgaaggaaaagggtcc
gtggctggttcggttggctgctgcagtgatcggcaagaagaagaggggcttgcatttcta
gatcatctggaacccaaatttaggacattagcaaagacatgtgtaaaacagtaa
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