Trichechus manatus latirostris (Florida manatee): 101349701
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Entry
101349701 CDS
T05135
Name
(RefSeq) pinin isoform X1
KO
K13114
pinin
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013
Nucleocytoplasmic transport
tmu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101349701
03015 mRNA surveillance pathway
101349701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101349701
03041 Spliceosome [BR:
tmu03041
]
101349701
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
101349701
Spliceosome [BR:
tmu03041
]
Complex C
Other components
EJC/TREX
101349701
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pinin_SDK_N
Pinin_SDK_memA
Motif
Other DBs
NCBI-GeneID:
101349701
NCBI-ProteinID:
XP_004376545
UniProt:
A0A2Y9DLR8
LinkDB
All DBs
Position
Unknown
AA seq
711 aa
AA seq
DB search
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNAIFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEVGIVHSDPEKEQEEEEQKQ
EIEVKMEEEIEVRESEKQQDSQPEEVMDVLEMVENVKNVIAEQEIMETNQVESVDPSENE
TSKEMEPEMEFEVEPDKERKYLSPGKENASAVEVEKESEENEVKESESQPEPMVQPQPQL
QSQPQPVLQPPPVSQPETLPLAVKQLPPQVIQEQGHLLLERKEFLVESVKLTEVPIEPVL
TVHPESKAKTKTRSRSRGRARNKTSKSRSRSSSSSTSSSSSTSSSSGSSSSSGSSSSRSS
SSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKS
SKGGSSRDTKGSKDKNSRSDRKRSISESSRSGKRSSRSERDRKSDRKDKRR
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcgcagtgagaactttgcaggagcaactggaaaaggccaaagagagcctaaag
aacgtggatgagaatattcgcaagctcaccgggcgggatccgaatgacgtaaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagacctcgaa
ggggcagtcagtaggctgggcggggagcgtcggacgaggagagaatcacgccaagaaagc
gacccagaggatgatgatgttaaaaagccagcgttgcagtcttcagttgtagctacctcc
aaagagcgtacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaatcgacgaatatttggcttgttgatgggcacccttcagaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagaggcgccaggaaattgaacagaaacttgaagtgcag
gcagaagaagagagaaagcaggttgaaaatgagaggagagaactgtttgaagagagacgt
gctaaacagacagaactgcggcttttggaacagaaagttgagcttgcacagctgcaagaa
gaatggaatgagcataatgctaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtccagctacccaaaaacttatagaagagtctcag
agaaaaatgaatgctatatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgtgaggaagagttggag
gagacaggtaatcagcacaatgatgtagaaatagaggaagcaggagaggaagaggaaaag
gaagtaggtatagttcatagtgatccagagaaagaacaggaggaggaggagcaaaaacag
gaaatagaggttaagatggaggaggaaattgaggtaagggaaagtgagaagcagcaggat
agtcagcctgaagaagttatggatgtgttagagatggttgaaaatgtcaaaaatgtaatt
gctgagcaggaaataatggaaactaatcaagttgaaagtgtagacccttcagaaaatgaa
actagcaaagaaatggaaccagagatggagtttgaagttgagccagataaagaacgtaaa
tatctttctcctgggaaagagaatgctagtgctgtagaagtagagaaggaatctgaggaa
aatgaagtaaaggaatctgagtcccagccagagcctatggttcaaccgcagccccaactc
caatctcagcctcaaccagtactccagcccccacctgtctctcagcctgagactttgcca
ttagctgtaaaacagctaccacctcaggttattcaggagcaagggcatttactacttgag
aggaaggagtttcttgtagaatctgtaaaactcactgaggtgccaatagaaccagtcttg
acagtgcatccagagagcaaagccaaaaccaaaactaggagcagaagcagaggtcgagct
agaaataaaactagcaagagtagaagtcgaagcagtagcagtagtacttctagtagcagt
tcaaccagtagcagcagtggaagcagttccagcagtggcagtagtagtagtcgaagtagt
tccagtagcagctccagtacaagtggcagcagcagcagagacagtagcagcagcactagt
agtagtagtgagagtagaagtcggagtaggggccggggacataatagagatagaaagcac
agaaggagcgtggatcggaagagaagggatacttcaggactagaaagaagtcacaaatct
tcaaaaggtggtagtagtagagatacaaaaggatcaaaggataagaattcccggtccgac
agaaagaggtctatatcagagagtagtcgatcaggcaaaagatcttcaagaagtgaaaga
gaccgaaaatcagacaggaaagacaaaaggcgttaa
DBGET
integrated database retrieval system
