KEGG   Trichechus manatus latirostris (Florida manatee): 101349998
Entry
101349998         CDS       T05135                                 
Name
(RefSeq) DNA damage-binding protein 2
  KO
K10140  DNA damage-binding protein 2
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03420  Nucleotide excision repair
tmu04115  p53 signaling pathway
tmu04120  Ubiquitin mediated proteolysis
tmu05161  Hepatitis B
tmu05169  Epstein-Barr virus infection
tmu05200  Pathways in cancer
tmu05202  Transcriptional misregulation in cancer
tmu05210  Colorectal cancer
tmu05212  Pancreatic cancer
tmu05213  Endometrial cancer
tmu05214  Glioma
tmu05216  Thyroid cancer
tmu05217  Basal cell carcinoma
tmu05218  Melanoma
tmu05220  Chronic myeloid leukemia
tmu05222  Small cell lung cancer
tmu05223  Non-small cell lung cancer
tmu05224  Breast cancer
tmu05225  Hepatocellular carcinoma
tmu05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    101349998
  09124 Replication and repair
   03420 Nucleotide excision repair
    101349998
 09140 Cellular Processes
  09143 Cell growth and death
   04115 p53 signaling pathway
    101349998
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    101349998
   05202 Transcriptional misregulation in cancer
    101349998
  09162 Cancer: specific types
   05210 Colorectal cancer
    101349998
   05212 Pancreatic cancer
    101349998
   05225 Hepatocellular carcinoma
    101349998
   05226 Gastric cancer
    101349998
   05214 Glioma
    101349998
   05216 Thyroid cancer
    101349998
   05220 Chronic myeloid leukemia
    101349998
   05217 Basal cell carcinoma
    101349998
   05218 Melanoma
    101349998
   05213 Endometrial cancer
    101349998
   05224 Breast cancer
    101349998
   05222 Small cell lung cancer
    101349998
   05223 Non-small cell lung cancer
    101349998
  09172 Infectious disease: viral
   05161 Hepatitis B
    101349998
   05169 Epstein-Barr virus infection
    101349998
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tmu04121]
    101349998
   03400 DNA repair and recombination proteins [BR:tmu03400]
    101349998
Ubiquitin system [BR:tmu04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     101349998
DNA repair and recombination proteins [BR:tmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      101349998
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR75_1st Beta-prop_RIG_2nd WDR55 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR19_1st EIF3I Beta-prop_TEP1_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 WD40_RFWD3 Beta-prop_HPS5 Beta-prop_EML Beta-prop_TEP1_C PEP5_VPS11_N WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_Vps41 PQQ_2
Other DBs
NCBI-GeneID: 101349998
NCBI-ProteinID: XP_004387744
UniProt: A0A2Y9E611
LinkDB
Position
Unknown
AA seq 464 aa
MAPRKRPETQKTPEVPKCPKSKRSRSPQELEQEAKKLFVKGPGSSRRHDSGCLWAGLANL
QVLPPYSSLVRALHQHKLGKAAWPMLQQSLQQSFLHSLASYRIFQKAAPFDRRATSLTWH
PTHPSTVAVGSKGGDVLLWNFNTKDKPTFIKGIGAGGSITGLKFNPLNTNQFFTSSMEGT
TRLQDFKGNTLRVFTSSGTCNFWFCSLDVSAGSRVVVTGDNAGQVVLLNMDGKELWNLRL
HKKKVTHVALNPCCDWLLATASVDQTVKIWDLRQVRGKSSFLSSLPHRHPVNAACFSPDG
ARLLTTDQNSEIRVYSASQWDCPLGVIPHPHRHFQHLTPIKATWHPRYNLIFVGRYPDPN
FKSCTPHELRTIDVFDGSSGNMMCQLYDPEYSGIISLNEFNPMGDTLASVMGYHILIWSQ
EEAGIQKRETVTKVCAKQGLGATNGNKSCEKRQLSVKGLKVYKS
NT seq 1395 nt   +upstreamnt  +downstreamnt
atggctcccaggaaacgaccagaaacccagaagacccctgaagttcctaagtgccccaag
agcaagaggagcagaagtcctcaggagctggagcaagaggccaagaaactctttgtgaaa
ggccccggttctagcagaagacatgactcaggctgtctttgggcaggattggctaacctg
caggttctgccgccatacagtagccttgtcagggccctccaccagcataagctgggcaaa
gctgcctggccgatgctgcagcagagtctccagcagtcctttttgcactctctggcttct
taccggatattccaaaaggctgccccctttgacaggagggccacatccttgacatggcac
ccgactcaccccagcaccgtggctgtaggttccaaaggaggcgatgtcttgctctggaac
tttaacacaaaggacaaacccaccttcattaaagggattggagctggagggagcatcaca
gggctgaagtttaaccctctcaataccaaccagttttttacctcctcaatggagggaaca
actaggctgcaagactttaaaggcaacactctccgagtttttaccagctcaggcacctgc
aacttctggttctgcagcctggacgtgtctgccggaagccgggtggtggtcacaggagac
aatgcggggcaagtggtcctgctgaacatggacggcaaggagctttggaatctcagactg
cacaaaaagaaggtgacccatgtggccctgaacccatgctgtgattggctcctggccaca
gcctctgtagatcaaacagtgaaaatctgggacctgcgccaggttagagggaaatccagc
ttcctctcctcgctgccacacaggcatcctgtcaacgcagcttgtttcagtcctgatgga
gcccggctcctgaccactgaccagaacagcgagatccgggtttactctgcctcccagtgg
gactgccccctgggcgtgatcccacaccctcaccgccacttccagcacctcacgcccatc
aaggcaacctggcatcctcggtacaacctcattttcgtgggccggtacccagatcctaat
ttcaaaagctgtactccccatgaattaaggacgatcgatgtgtttgatggaagctcaggg
aatatgatgtgtcagctctatgacccagaatattctggtatcatttcgctcaatgaattc
aatcccatgggggacacgctggcctctgtgatgggttatcacattctcatttggagccag
gaggaagctgggatacagaagcgagagacagtcacaaaggtgtgtgccaagcaagggctt
ggagctacaaatgggaacaagtcctgtgagaagcggcagctatctgttaaagggctaaaa
gtatacaagtcttag

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