Trichechus manatus latirostris (Florida manatee): 101350017
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Entry
101350017 CDS
T05135
Name
(RefSeq) E3 ubiquitin-protein ligase RING1
KO
K10695
E3 ubiquitin-protein ligase RNF1/2 [EC:
2.3.2.27
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
101350017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmu04121
]
101350017
03036 Chromosome and associated proteins [BR:
tmu03036
]
101350017
Enzymes [BR:
tmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101350017
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
101350017
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
101350017
Noncanonical PRC1 (PRC1.1)
101350017
Noncanonical PRC1 (PRC1.3/1.5)
101350017
Noncanonical PRC1 (PRC1.6)
101350017
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAWUL
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_UBOX
zf-Nse
zf-C3HC4_4
zf-RING_6
zf-RING_4
zf-RING_5
RING_XB3-XBAT31
zf-rbx1
zf-UDP
TRAF3_RING
zf-C3HC4_5
Sina_RING
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
101350017
NCBI-ProteinID:
XP_004389856
UniProt:
A0A2Y9EB00
LinkDB
All DBs
Position
Unknown
AA seq
406 aa
AA seq
DB search
MTTPANAQNASKTWELSLYELHRTPQEAIMDGTEIAVSPRSLHSELMCPICLDMLKNTMT
TKECLHRFCSDCIVTALRSGNKECPTCRKKLVSKRSLRPDPNFDALISKIYPSREEYEAH
QDRVLIRLSRLHNQQALSSSIEEGLRMQAMHRAQRVRRPMPGSDQTTTMSGGEGEPGEGE
GDGEDVSSDSAPDSAPGPAPKRPRGGGAGGSSVGTGGGGTGGVGGGAGSEDSGDRGGTLG
GGTLGPPSPPGAPSPPEPGGEIELVFRPHPLLVEKGEYCQTRYVKTTGNATVDHLSKYLA
LRIALERRQQQEAGEPGGPGGGASDAGGPDGGGGEGGGAGGGDGPEEPALPSLEGVSEKQ
YTIYIAPGGGAFTTLNGSLTLELVNEKFWKVSRPLELCYAPTKDPK
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgacgacgccggcgaatgcccagaatgccagcaaaacgtgggaactgagcctatatgag
ctgcaccggaccccgcaggaagccatcatggatggcacagagattgcggtttctcctcgg
tcgctgcactcagaactcatgtgccccatctgcctggacatgctgaagaatacgatgacc
accaaggagtgcctccaccgcttctgctccgactgcatcgtcacagccctgaggagcggg
aacaaggagtgccccacctgtcgcaaaaagcttgtatccaagcggtccctgcggccagac
cccaactttgacgccctgatctctaagatctatcccagccgggaggaatacgaggcccac
caagaccgagtgctcatccgcctcagccgcctgcacaaccagcaggcactcagctccagc
atcgaggaggggctgcgcatgcaggccatgcaccgggcccagcgtgtgaggcggccgatg
cctgggtcagatcagaccacaacgatgagtgggggggaaggagagcctggggagggagag
ggggatggagaggacgtgagctcagactctgcccctgactcggccccaggccctgctccc
aagcgaccccgtggagggggcgcaggggggagcagtgtagggacagggggaggtggcact
ggtggggtgggtgggggtgctggttctgaagactctggtgaccggggaggaactctggga
gggggaaccctggggcccccaagccctcctggggccccaagtcccccggagccaggtgga
gaaatcgagcttgtgttccggccccacccactgctcgtggagaagggagaatactgccag
actaggtacgtgaagacaactgggaatgccacagtggaccatctctccaagtacttggcc
ctgcgcattgcccttgagcggaggcagcagcaagaggcaggggagccaggagggcctgga
gggggtgcctctgatgctggaggacctgatgggggtggtggggagggcgggggtgccgga
ggtggtgatggccctgaggagcctgccttgcccagtctggagggtgtcagcgagaagcag
tacacgatctacatcgcccccgggggcggagctttcacgacgctgaatggctcactgacc
ctggagctggtgaatgagaagttctggaaagtgtcccggccactggagctctgctatgcc
cccaccaaggatccaaagtga
DBGET
integrated database retrieval system
