Trichechus manatus latirostris (Florida manatee): 101350128
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Entry
101350128 CDS
T05135
Name
(RefSeq) ran GTPase-activating protein 1 isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
101350128
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101350128
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
101350128
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
LRR_4
SDA1_dom
CPSF100_C
IFN-gamma
Nop14
BUD22
RNA_pol_Rpc4
THOC2_N
PI3K_1B_p101
Sigma70_ner
NOA36
Nse4-Nse3_bdg
Motif
Other DBs
NCBI-GeneID:
101350128
NCBI-ProteinID:
XP_004373953
UniProt:
A0A2Y9QTY3
LinkDB
All DBs
Position
Unknown
AA seq
583 aa
AA seq
DB search
MASEDIAKLAETLAKTQVAGGQLSFKGKSLKLNTAEDAKDVIKEIEDFDGLEALRLEGNT
VGVEAAKVIAKALEKKSELKRCHWSDMFTGRLRSEIPPALISLGEGLITAGAQLVELDLS
DNAFGPDGVRGFEALLKSSACFTLHELKLNNCGMGIGGGKILAAALTECHRKSSAQGKPL
ALKVFVAGRNRLENDGATALAEAFGIIGTLEEVHMPQNGINHPGVMALAQAFAINPLLRV
INLNDNTFTEKGAVAMAETLKTLRQVEVINFGDCLVRSKGAVAIADAVRGGLPKLKELNL
SFCEIKRDAALAIAEAVGDKAELEKLDLNGNTLGEEGCEQLQEVLDGFNMAKVLASLSDD
EGEDDEDEEEEEGEEEEEEDEEEEEEEEEEEEEPQQQGQGEELTTPSRKILDPNSGEPAP
VLSSPPPVDVSTFLAFPSPEKLLRLGPKSSLLIAQQTDTSDPEKVVSAFLKVSSVFKDEA
TVRMAVQDAVDALMKKAFSSSSFNSNAFLTRLLIHMGLLKSEDKVKAIANLYGPLMALNH
MVQQDYFPKALAPLLLAFVTKPNGALEACSFARHNLLQTLYKV
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgaagacattgccaaactggcggagacgctggccaaaacccaggtggccggg
ggacagctgagtttcaagggcaagagcctcaaactcaacactgcagaagatgctaaagat
gtgattaaagagattgaagactttgatggcttagaggctctgcgcctggagggcaacacg
gtgggtgtggaagctgccaaggtcatcgccaaggccttggagaagaaatcggagttgaag
cgatgccactggagtgacatgttcacagggagactgaggtccgagatccccccagccctg
atctcacttggggagggacttatcactgccggggcccagctggtggagctggacttgagc
gacaatgccttcgggcctgatggcgtgcgcggcttcgaggccctcctcaagagctctgcc
tgcttcaccctgcatgagctcaagctcaacaactgcggcatgggcatcggcggaggcaag
atcctggcagcagctctgactgagtgtcaccgcaagtccagtgcccaaggcaagcctctg
gccctaaaggtctttgtggctggcaggaaccgtctggagaatgatggagccactgccttg
gcagaagcttttgggatcatcgggactctggaggaggtccatatgccccagaatgggatc
aatcaccccggtgtcatggccctggcccaggccttcgccatcaaccccctgctgcgggtc
atcaacctcaatgacaacaccttcactgagaagggggctgtggccatggccgagaccctg
aagaccttgcgacaagtggaggtgatcaacttcggggactgcctggtgcgctccaaaggt
gctgttgccattgcagatgccgtccgtgggggcctgcccaaactgaaggagctgaacttg
tcattctgtgaaatcaagagagatgctgctctggccattgctgaggccgtgggggacaag
gctgagctggagaagctggacctcaacggcaacaccctaggagaagaaggctgtgagcag
cttcaggaagttctggatggcttcaacatggccaaagtgctggcatccctcagtgatgat
gaaggtgaggatgatgaggacgaggaggaggaggaaggagaggaggaggaagaagaagat
gaagaggaggaggaggaagaggaagaggaggaagaagagccacagcagcaagggcaagga
gaggagttgaccacaccctcaaggaagattctggaccctaacagtggcgaaccagctcct
gtgctgtcctccccgccccccgtggacgtctccaccttcctcgctttcccctctccagag
aagctcctgcgcctgggccccaagagttccctgttgatagcccagcagaccgacacatct
gatccagagaaggtggtctctgccttcctgaaggtgtcttctgtgttcaaggacgaagcc
acagtgaggatggctgtgcaggacgcagtagatgccttgatgaagaaggccttcagctca
tcctccttcaactccaatgccttcctcaccaggctcctcatccacatgggtctgctaaag
agtgaagacaaggtcaaggccattgccaacttgtacggccccctgatggctctgaaccac
atggtgcagcaggactacttccccaaggcccttgctcccctgctgctggcgttcgtgacc
aagcccaatggtgccctggaagcctgctcctttgcccgtcacaacctgctgcagacgctg
tacaaggtctag
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