Trichechus manatus latirostris (Florida manatee): 101350154
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Entry
101350154 CDS
T05135
Name
(RefSeq) nuclear receptor ROR-beta isoform X2
KO
K08533
RAR-related orphan receptor beta
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
101350154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101350154
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tmu03310
]
101350154
Transcription factors [BR:
tmu03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
101350154
Nuclear receptors [BR:
tmu03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
101350154
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
101350154
NCBI-ProteinID:
XP_004383347
UniProt:
A0A2Y9DY87
LinkDB
All DBs
Position
Unknown
AA seq
459 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYSSSISNGLSNLNNETSGTYANGHVIDLPKSEGYYSVDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAAGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCATVCK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcccaaatcgaagtgataccatgcaaaatttgtggcgataagtcctccgggatc
cactacggagtcatcacgtgtgaaggctgcaagggattctttaggaggagccagcagaac
aatgcctcttactcctgcccacggcagagaaactgtttgattgacagaaccaacagaaac
cgttgccaacactgccgactgcagaagtgtcttgccctgggaatgtcaagagatgctgtg
aagttcgggaggatgtccaagaagcaaagggacagcctgtacgcagaggtgcagaagcac
cagcagaggctgcaggaacagcgacagcagcagagtggggaggcggaagccctggccagg
gtgtatagcagcagcattagcaacggcctgagcaacctgaacaacgagaccagcggcact
tatgccaatgggcacgtcattgacctgcccaagtccgagggttattacagcgtggattca
ggccagccgtcccctgatcagtcaggacttgacatgactggaatcaaacagataaagcaa
gaacccatctatgacctcacatccgtccccaacttgtttacctatagctctttcaacaac
gggcagttagcagctggaataacaatgactgaaatcgatcgaattgcacagaacatcatt
aagtcccatctggagacatgtcaatacaccatggaggagctgcaccagctggcatggcag
acccacacctatgaagaaattaaagcgtatcaaagcaagtccagggaagcactgtggcag
caatgtgccattcagatcactcacgccatccaatacgtggtggagtttgctaagcggata
acaggcttcatggaactctgtcaaaatgatcagattctacttctgaagtcaggttgcttg
gaagtcgttttagtgagaatgtgccgtgccttcaacccactaaacaacactgttctgttt
gaagggaaatatggaggaatgcagatgttcaaagccttaggttctgatgacctagtgaat
gaagcatttgactttgcaaagaatttatgttccttgcagctgaccgaggaggagattgct
ttgttctcatctgctgttctgatatctccagaccgagcctggctgatagaaccaaggaag
gtccagaagcttcaggaaaaaatttattttgcacttcaacatgtgattcaaaagaatcac
ctggatgatgaaacgttggcaaagttaatagccaagataccaaccatcacggctgtttgc
aacttgcacggggagaaactgcaggtatttaagcaatctcatccagacatagtgaacaca
ctgttccctccattatacaaggagctctttaatcctgactgtgccaccgtctgcaaatga
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