KEGG   Trichechus manatus latirostris (Florida manatee): 101350165
Entry
101350165         CDS       T05135                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    101350165
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tmu03400]
    101350165
DNA repair and recombination proteins [BR:tmu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     101350165
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 101350165
NCBI-ProteinID: XP_004388828
UniProt: A0A2Y9E801
LinkDB
Position
Unknown
AA seq 630 aa
MPEIRLRHVVSCSSQDSTHCAENLLKADTYRKWRAAKAGEKTISVVLQLEKEEQIHSVDI
GNDGSAFVEVLVGSSAGGGGEQDYEVLLVTSSFMSPSESRSGSNPNRVRIFGPDKLVRAA
AEKRWDRVKIVCSQPYSKDSPYGLSFVRFHSPPDKDEAEASSQKVTKLGQFRVKEEDEGG
SSLRPGALFFSRVNKTSPGKWGRPLAWVXERRELGAWTPGSEGALASRAVGSTSKPQESS
KGKRKLDLNQEEQKTPSKPSAQLSPPVLKRPKLPTPAHTPAMAPVPAPACGTEPGKPQRE
GTKPKGPRTSPQELGKILQGVVVVLSGFQNPFRSELRDKALELGAKYRPDWTPDSTHLIC
AFANTPKYSQVLGLGGRIVRKEWVLDCHRMRRRLPSRRYLMAGPGSSSEDEGDSHSGSSG
DEAPRLPHKPPQTTTKPPQAAGPSSPKRSPAPEETKPATPGAQEDSDAEGEPSEGQDNGA
EDSGDTEDELRRVAKQRQQRQPPGQENEEDPYAGSTDENTDTEERPGSPTLPVPELPDFF
QGKHFFLYGEFHGDERRKLIRYVTAFNGELEDYMSDRVQFVITAQEWDPSFEEALMDNPS
LAFVRPRWIYSCNEKQKLLPHQLYGVVPQA
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgccggagatccgcctccgtcatgtcgtgtcatgcagcagccaggactcgacccactgt
gcagaaaaccttctcaaggcggacacataccggaaatggcgggcagccaaagcaggcgag
aagaccatctctgtggtcctccagctggagaaggaggaacagatacacagcgtggacatc
gggaacgacggctccgccttcgtggaggtgctggtgggcagctctgccggcgggggtgga
gagcaagactacgaggtccttctggtcacctcatctttcatgtccccttctgagagccgc
agtggctcaaaccccaaccgtgttcgcatttttgggcctgacaagttggtccgggcagcc
gctgagaagcgctgggaccgtgtcaaaattgtttgcagccagccctacagcaaggactcc
ccctatggcctgagttttgttcgatttcacagcccccccgacaaagatgaggcagaggct
tcatcccagaaggtaaccaagcttggccagttccgagtgaaggaggaggacgagggtggc
agctccctgagaccgggggctctcttcttcagccgggtcaacaagacatccccaggtaaa
tggggaagaccactagcctgggtctgagagaggagggagctgggggcctggactcctggg
tctgagggtgccctggcctccagggctgtaggtagtacctccaagcctcaggagtcctcc
aaggggaagaggaagttggatttgaaccaagaagaacagaagacccctagcaaaccgtca
gcccagctctctccacctgtgctcaagagacccaaattgccaactcccgcccatacccca
gccatggccccagtccctgccccagcatgtgggacagagccagggaagccccagagagaa
ggcaccaagcccaagggaccccgaactagcccccaggagctgggcaagatcctgcagggc
gtggtggtggtgctgagcggcttccagaaccccttccgctcagagctccgggacaaagcc
ttagagctgggggccaagtatcggccagactggaccccagatagcacccacctcatctgt
gcttttgccaacacccccaagtacagccaggtcctaggccttggcggccggatcgtgcgt
aaggagtgggtgctggactgtcaccgcatgcgtcggcggctaccctcccggaggtacctc
atggcgggaccaggctcgagcagtgaggatgagggggactctcacagtggcagcagcggg
gatgaagcccccaggcttcctcacaagcccccacagaccacaaccaagccccctcaggca
gcaggacccagctcacccaagaggtcccccgcccctgaagagaccaaaccagccacacca
ggggcccaggaggattctgacgctgaaggggaaccgtcagaaggacaggacaatggggcg
gaagattctggggacaccgaggatgagctgagaagggtggccaagcagaggcagcagagg
cagcccccaggccaggagaatgaggaggacccgtatgcaggctccacagatgagaacacg
gacaccgaggagcgcccagggtctcccaccctgccggttcccgagctcccagacttcttc
cagggcaaacacttcttcctgtacggggagttccatggggatgagcggcggaagctcatt
cgatacgtcacagccttcaatggggagctcgaggactatatgagtgacagggtccagttt
gtgattactgcacaggagtgggaccccagctttgaggaggccctgatggacaacccctcc
ctggccttcgtccgcccccgatggatctacagttgcaacgagaagcagaagttacttccc
caccagctgtatggcgtggtgccccaggcctga

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