Trichechus manatus latirostris (Florida manatee): 101350213
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Entry
101350213 CDS
T05135
Name
(RefSeq) DNA topoisomerase 2-binding protein 1 isoform X1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
101350213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tmu03032
]
101350213
03400 DNA repair and recombination proteins [BR:
tmu03400
]
101350213
DNA replication proteins [BR:
tmu03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
101350213
DNA repair and recombination proteins [BR:
tmu03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
101350213
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
Motif
Other DBs
NCBI-GeneID:
101350213
NCBI-ProteinID:
XP_004381466
UniProt:
A0A2Y9DUX9
LinkDB
All DBs
Position
Unknown
AA seq
1520 aa
AA seq
DB search
MSGNDKEPFFVKFLKSPDNSECFFKALESMKEFQSEEYLHIITEEEALKIKENDRSLYIC
DPFSGIVFDHLKKLGCRIVGPQVVIYCMHHQRYVPRAEHPVYNMIMSDIIVSCTSLEREE
REEVHKYVQMMGGRVYKDLHVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKALWEKSQ
EKKIDRYTDINMEDFKCPVFLGCVICVTGLCSLDRKAVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTRWFFDSVEKGFCQDESIYKTEPNPETKPVPETSTPT
GQVNALDSRTLSDVSHISNINASCVNESICNSGLNSKLEPTLENLENLDVSAFQAPEDLL
DGCRIYLCGFSGRRLDKLRRLINSGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRP
HVVGTKWLLECFNKGYMLPEEPYIHANYQPVEIPVSDQPESRTAVLKKNSSSFSKQDFTP
DEKHEQADEDLLSQYINNNSAVVEAKKSEAEKSEIGSLNDSTHISLQEENQPSVSHCLPD
TSIITEEGLFSQKSFLILGFSNENETNIENIIRENAGKIVSLQSRTVADYAVVPLLGCEV
EATVGEVVTNTWLVTCIDYQILIDPKSNPLFMPVPVMTGTTPLEDCVISFSQCAGAEKDS
LTFLANRLGASVQEYFVRKSNAKKGMFASTHLVLKEPSGSKYEAAKKWNLPAVTIAWLLQ
TARTGKRADESYFLIENLPKEEQSLETEIMSGVNLNPNPAEHPDARLETHRRTAVTPLDM
NRFQSKAFQAVISQHTGQVSDALTTGQPLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDAL
AALETPRGLSQQKRKLSTPLSEVIVRNLKLALANSSRNAVTLSASPQLKDAQSKKEEVPK
PLHKVVICVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVKE
KGIHIVSEHWLLECAQEFKHLPESLYPHTYNPKMSLDISAVQDGRLCNSRLLSANSTTKD
DEPDHLPLEEKDTNNMSITNKESAASNGSGKNDTKGALTQTLEMRQNFQKQLQEIMSATS
IVKPQGQRNSLSRSGCNSTSSTPDSTRSVRSGRSRVLEALRQSRQTVPDINTEPSQNEQI
IWDDPTAREERARLASNLQWPMCPTQYSELQVDVKKLEDSPFQEPLHDSEIAEQAVCDPG
NLCVTEAPKHHLTSEELETPIKDSHLIPTPQAPSIAFPLANPPVAPHPREKVITVEETHE
DLKKQYIFQLSSLNPQERIDYCHLIEKLGGLVIEKQCFDPNCTHIVVGHPLRNEKYLASV
AAGKWVLHRSYLEACRTAGRFMPEEDYEWGSSSILDALTGINVQQRRLALAAMRWRKKIQ
QRQETGIVEGAFSGWKVILHVDQSREAGFKRLLQSGGAKVLPGHSVPLFKEATHLFSDFN
KQKPDDSGVNIAEAAAQNVYCLKTEYIADYLMQESPPHVESYCLPEAVSFLQNNKELGPG
LSQKRKVPTEKNKIKRPRVH
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgtccggaaatgacaaagaaccgttctttgtgaagtttttaaagtctccagacaattct
gaatgttttttcaaagctcttgagtcaatgaaagagttccaatcagaagaatatcttcat
attattacagaagaagaggcattgaagataaaggagaatgatagatcactttatatctgt
gacccttttagtggcattgtctttgatcacctcaaaaagcttggatgcagaattgttggt
cctcaagtagtcatatattgtatgcaccaccagcgatatgtcccgagagctgaacatcca
gtttataatatgattatgtctgatataatcgtatcttgtacaagcctcgaaagagaagaa
agggaagaagttcataaatatgtacaaatgatgggtggacgagtatataaagaccttcat
gtgtcagtgactcaccttattgcaggagaagttggtagcaaaaaatatttagttgctgca
aacctaaagaaacctattttgcttccttcttggataaaagcactttgggagaagtcacaa
gagaaaaaaatagatagatacactgatataaacatggaagatttcaagtgtcctgttttt
cttggttgtgtaatctgtgtgactggcttgtgtagcttggacaggaaggcagttcagcaa
ctcacagttaagcatggaggtcaatatatgggacaactgaaaatgaatgaatgtacacac
ctcattgtgcaagaaccaaagggtcagaaatacgaatgtgccaagaggtggaatgttcat
tgtgtgaccacgcggtggttttttgacagtgtcgagaaaggcttttgtcaggatgaatct
atatacaagacagagcctaacccagaaacaaagcctgtgcctgagacttcaactcctact
ggccaggtcaacgcacttgatagtcgtactctttcagatgtcagccacatttctaacatc
aatgcaagttgtgtaaatgagtccatatgtaattcaggtcttaatagcaaattggagcct
acactggaaaatctagaaaatctggatgtcagcgcatttcaagcacctgaagatttatta
gatggctgccggatatatctttgcggttttagtggcagaaggctagataaactgagaagg
cttattaacagtggaggtggagttcgttttaatcagctcaacgaagatgtaactcatgtt
attgtgggagattatgatgatgaattgaagcagttttggaataaatcagcccacaggcct
catgtagtgggaacaaagtggttgctagagtgttttaataaaggttatatgcttcctgaa
gagccatatatccatgctaactaccagccagtggaaattccagtttcagatcaacctgaa
agtagaacagccgttttaaaaaagaatagcagcagcttttctaagcaagactttacacct
gatgaaaaacacgagcaagctgatgaagatctgctgtcacagtacataaacaataactca
gcagtagttgaagctaagaagtctgaggctgagaagtctgaaattggatccttaaatgat
tctactcatatttctctgcaagaagaaaaccagccttctgtcagtcattgcctccctgac
acttctataattactgaagaaggcttatttagccaaaagagtttccttattttgggtttt
agtaatgaaaatgaaactaatattgaaaacatcataagagaaaatgctggaaaaatcgtc
tcccttcagagcagaactgttgcagattatgctgtggttcctctgctgggatgtgaagta
gaagcaacagtgggcgaagttgttacaaatacatggctggttacttgtatagactaccag
attttaattgacccaaagtcaaatcctctcttcatgccagtcccagtaatgacaggaaca
actcctttagaagattgtgttatttcgttcagccagtgtgctggagcagaaaaagattct
ttgacatttttagcaaatcgccttggagcaagcgttcaagaatactttgttcgcaaatcc
aatgcaaagaaaggcatgttcgccagtactcatcttgtattgaaagaaccaagtggttct
aaatatgaagctgcgaagaagtggaacttaccagcagtcactatagcttggctgttgcag
actgctagaacgggaaagagagcagatgaaagctattttctgatagaaaatctacctaaa
gaagaacaaagtttggaaactgaaataatgagtggagtgaatctaaatccaaatcctgca
gagcatcctgatgcacgcttggaaacacacagaagaacagctgttacacctttagatatg
aacaggtttcagagtaaagctttccaggctgtgatttcacaacatactggacaggtgtca
gacgccctaaccacaggacagccacttcagaaggagccctcattacacctggatacgcca
tcaaaatttctgtccaaagacaaactcttcaagccatcctttgatgtgaaggatgcactt
gcagccttggaaactccacgaggtctcagccaacagaaaaggaaattgagtacaccactc
tcagaagtcattgtcagaaacttgaaactggctttggcaaatagctctcgaaatgctgtt
actctctctgccagccctcaactgaaggatgcccagtctaagaaggaagaagttccaaag
ccacttcacaaggtagtgatatgtgttagtaaaaaactcagtaagaagcagagtgaacta
aatgggattgcagcctctctaggagcagattacaggtggagttttgatgaaacagtgacc
catttcatctatcaagggcgaccaaacgacactaatcgggagtataaatctgtaaaagaa
aaaggaatacacattgtttcagagcactggcttttagaatgtgctcaggagttcaagcat
cttcctgaatctctttacccacatacttataatcccaaaatgagcctggatatcagtgca
gtgcaagatggcagactctgtaatagtcgactactctcagctaattcaacaacaaaggat
gatgagcctgatcatttgccattagaagaaaaggatacaaacaacatgtctatcactaat
aaagaatcagcagcatcaaatggaagtggaaagaatgacactaaaggagctctcacacag
accttggagatgagacagaacttccaaaagcaactgcaggagataatgtctgcaacgtca
atagtgaaaccccaagggcagaggaattccctttcgagaagtggttgtaacagtacttct
tcaacccccgacagcacacgctctgtccgcagcggacgaagtagagtcctagaggcactc
aggcagtctcgtcaaacagtacctgatatcaacacagagccctcgcaaaatgaacagatc
atttgggatgaccctacagccagagaggagagagcaaggctcgccagcaatttgcagtgg
cccatgtgtcccacacaatactctgagcttcaggtggatgtaaaaaaattggaggattcc
cctttccaggagcctttacatgattcagaaattgctgaacaggctgtctgtgatcctgga
aacctatgtgtgactgaagccccaaaacaccacctgacctctgaagaactggaaactcca
ataaaagacagccacctgatccctacaccacaagcccctagtattgccttccctctcgcc
aatccacctgtggctccacaccctagagaaaaggttataacagtagaggagactcatgaa
gacttaaaaaaacaatacatatttcagttgtcatctctgaatcctcaagaacgtattgat
tattgtcatctcattgaaaaactaggtggattagtgatagagaagcagtgctttgatcct
aactgtacacacattgttgtgggacatccacttcgaaatgagaagtatttggcctcggtg
gcagctgggaagtgggtgcttcatcgctcctacctggaagcatgcaggactgctgggcgc
ttcatgccggaagaagactatgaatggggaagtagttccattcttgatgctttgactgga
atcaatgtacagcaacggagactagcacttgcagcaatgagatggagaaaaaaaatccag
caaagacaagaaacaggcattgttgagggggcatttagtgggtggaaggttattttacat
gttgatcagtcccgagaagcaggattcaagcgtcttcttcagtcgggaggagcaaaggtg
ttacctggtcattctgtacctttatttaaagaagccacacatctcttttctgactttaat
aaacaaaaaccagatgactcaggagttaatatagcagaagctgctgcccagaatgtgtac
tgcttgaagacagaatacatcgctgattatctcatgcaggaatcccctcctcacgtagaa
agttactgtctcccagaagctgtttcgtttcttcagaataataaggaacttgggcctgga
ttatcacagaagaggaaagtgcctacagagaaaaataaaatcaaacgacctagagtacac
taa
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integrated database retrieval system
