Trichechus manatus latirostris (Florida manatee): 101350336
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Entry
101350336 CDS
T05135
Name
(RefSeq) LOW QUALITY PROTEIN: nephrocystin-4
KO
K16478
nephrocystin-4
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tmu03037
]
101350336
Cilium and associated proteins [BR:
tmu03037
]
Primary cilia and associated proteins
Nephronophthisis-related proteins
101350336
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NPHP4_C2_3rd
Ig_NPHP4_1st
Ig_NPHP4_4th
Ig_NPHP4_2nd
Ig_NPH4_3rd
NPHP4_SK
Motif
Other DBs
NCBI-GeneID:
101350336
NCBI-ProteinID:
XP_004385158
UniProt:
A0A2Y9E107
LinkDB
All DBs
Position
Unknown
AA seq
1422 aa
AA seq
DB search
MKDWHGVFTQNVLVPPHPQRGRQLPKESTAFQCVLKWLDGPLIKQGVQEVLSEVNWHLRV
SFFDITYRHFFGKTWKTTVRPAKQLSRHPPRIIFNEPLYFHTSLNHPNIVAVVEVVTEGR
KRDGTLQMLSCGFGILRIFSNKPESPTSASQDKRLRLYHGTPRALLHPLLQDPIEQNKHL
TLIENCSLQYTLRPHPALEPVLHLLPENLLVSGLQDIPGLLPAHGETGDALRKPRLQKPV
TWYLDDLFFNLYPSLERFEEELLELLSSDRFREGNSPGDSGTLEIRERRLCVGVHNGLAF
VQRPQVVVLVPEMEVALTRSASFSRKVNSSSKSSSGNQALVLRSRLRLPEMVSHPAFAIV
FQLEYVFNAPAGLDGSAASATSLSNLACMYMVRWAIWSPGLDTGSGRVTLPLQGGTQPGP
SHCLVYKVPSASMSSEEVKQVESGTVQFQYSLSPEEHLDTSLERASSTKAERRQSSKKPP
TSPSSPPAPPPSRLAATQDSPVGPGLSISQLAASPQSLAQHRSSRPSPVLAQELPFEGRI
SHLEADLSQTSVVLDTCVAEQLQELPFTPLHAPIVVGAQARSSGSALSRASMVLLQSSGF
PEILDANKQPAEAVNPTEPVKFSPQKEESDCLQSNEIVLQFLAFSRVSQDHRGTPWPKTV
YFTFQFYRFPPTTTPRLQLVKLDEARKTSSGSLSHILVSVNKDGSFDAGSPGLQLKYMVD
PGFLKPGEQRWFLQYLAMQTLQIDVWDGDALLLVGSAAVQMKHLLRQGRPAVQVSHELEV
VATEYEQDVVVVSGDVTRFGSVKPIGVHTVVKGRLHLTLANVGHVCEQRVRHSNSLPPSR
SRVISNDGTSSFPGGSLLMKGSLRXKRVVQAQKLANVDSELAAMLFTHMQMGSRNPQSAG
READAVRRRKLERMQSVRLREARGELGGQRSSVLAQQSVRAQHLRDLQVIEAYRERTKAE
GIASLLSLAITTQHTLYTSLGTAEFFEFALKNPHNTQHTVTVEIDNPELSVILDSREWRH
FKDAAGLLTPVEEDMFHLRGGGLAPQLYLRPKETAHIPFKYQTFSLGQPAATQASAELRP
EQGVDTEPPWKSSAAPTKHAKVTFRASSGKPLAVLCLAVEPQPHVVDQIFRFYHPELTFL
KKSIRLPPWHMLPGAPVGPPGEDPPIHVRCSDPNVICETQNVGPGEPRDVFLKVASGPSP
EIKDFFVTIYVDRWLAAPVQIWQVHLHSLQRVDVSCVTGQLTRLSLVLRGTQTVRKVRAF
TSHPQELKMDPQGVFVLPPHGVLDLHVGVRPRRAGSRFVHLNLVDVDFHQLVASWLICLS
CRQPLISKAFEITMAVGEGKGANKRITYTNPYPSRRVYHLHSNHPDLLQFKEDSFEVGGG
ETYTISLRFAPSQSPGEEEILIYINDHEDKNEETFCVKVIYQ
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atgaaggattggcacggggtatttacccaaaatgtgcttgtccctccccacccccagagg
gggcgccagcttccgaaggaatcgacagcattccagtgcgtcctgaagtggcttgatggg
ccgcttatcaagcagggtgtgcaggaagtgctgtctgaagtcaactggcatctgcgggtg
tccttctttgacatcacctaccgacacttctttgggaagacgtggaaaaccaccgtgagg
ccagccaagcagctttcgaggcacccgcctaggatcatcttcaatgagcccttgtatttc
catacgtccttaaaccatcctaacatcgtggcagtggtagaagtggtcacagaaggccgg
aaacgggatgggacccttcaaatgttgtcctgtgggtttggaattcttcgaatcttcagc
aacaagccagagtctcctacctctgcctcccaggacaaacggttgaggttgtatcacggc
acccccagagccctcttgcacccgctgctccaggaccccatagaacagaacaagcacctg
accctcattgagaactgcagcctacagtacaccttgaggccacacccggccctggagccc
gtgctccaccttctccccgagaacctgctggtttctggcttgcaggacatcccaggcctc
ctgccagctcacggagaaacgggtgatgcccttcgaaagcctcgccttcagaagcctgtc
acctggtacttggacgatttgttcttcaacctgtacccgtccctggagagatttgaagaa
gaacttctggaactcctcagcagtgatcgcttccgggaggggaacagccctggggacagt
ggcaccctggagatccgggagcggcgcctgtgtgtgggcgtgcacaatgggctggccttt
gtgcagaggccacaggtggtcgtgctggtgcctgagatggaggtggccctgacacgctcc
gccagcttcagcagaaaagtcaactcctcctccaagagcagctctggaaaccaagctctg
gttttgagaagccgccttcgactccctgagatggtcagccacccagcgttcgcgatcgtc
tttcagctggagtacgtgttcaatgcccccgcaggactggacggcagtgcagcgtctgcc
acctcactatccaacttggcgtgcatgtacatggttcgctgggccatctggagccctggg
ctggacaccggctctgggcgggtgaccttacctctgcagggcgggacccagcctggcccc
tctcactgtctggtctacaaggtgccctcagccagcatgagctccgaagaggtgaagcag
gtagagtcggggacagtgcaattccagtactcgctcagcccggaagaacatttggacacg
tctctggagcgggccagcagcaccaaggcagagcggcggcagtcctccaagaagccaccc
acgtcgccttcaagccctccagcaccaccaccctcgagacttgctgccacccaggattcg
cccgtgggaccagggttgtccatttcccagctggcagcgtccccacagtccctggcccag
caccggtcatccaggccctctcccgtcctagcccaggagctcccctttgagggcaggatc
tctcacctggaagctgatctgagccagacttctgtggtcttggacacctgtgttgccgaa
cagttgcaggagctgcctttcacgcccttgcatgccccgatcgttgttggggcccaggcc
agaagctccggaagcgcgctctcccgggcctcgatggtgctcctgcagtcctccggcttt
ccagagattctggatgccaataagcaaccagctgaggccgtgaatcccacagagcccgtg
aagttcagccctcagaaggaagaatcagactgtctgcagagcaacgaaatagtgctacag
tttcttgcctttagcagagtatctcaggaccacaggggaacgccgtggccaaagactgtg
tatttcaccttccagttctaccgcttcccacccacgaccaccccccggctgcagctggtc
aagctggacgaggccaggaagaccagctcgggctccttgtctcacatcctcgtttcagtt
aacaaagatggatcctttgatgctgggtctcctggcctccagcttaagtacatggtggac
cctgggttcctgaaacccggagagcagcgctggttcctccagtacctggccatgcagacc
ctgcagatcgacgtctgggatggggacgccctgctccttgttggctcggctgctgtccag
atgaagcatctcctccgccaagggcggccggctgtccaggtctcgcatgagctcgaggtg
gtggcgacggaatacgaacaggacgtggtggtggtcagtggagatgtgacccggtttggc
agcgtcaagcccattggtgtccacactgtggtgaagggccggctgcacctgaccttggcg
aacgtgggtcatgtgtgtgagcagagggtgagacattccaactcgttgccaccatccaga
tcgagggtcatctccaacgacgggaccagcagcttcccaggaggcagcctcctcatgaag
ggatccctgagatgaaaacgtgtggtccaggcccagaaactggctaacgtggacagtgag
ctggctgccatgctgttcacccacatgcagatggggagccggaacccccagagtgctggc
cgcgaggcagatgctgtccgcaggcgcaagctggagagaatgcagtcggtgcgcctgcgg
gaggccagaggagagcttggcggccagaggagcagtgtgctggctcagcagagtgtccga
gcacagcacttgcgggacctgcaggtcattgaggcctaccgcgagcgcacgaaggccgag
ggcatcgccagcctgctgagcctggccatcaccacccagcacacactatacacctccctg
ggcaccgccgagtttttcgagtttgcccttaagaaccctcacaacacgcagcacacggtg
accgtggagattgacaaccctgaactcagcgtcatcctggacagcagggaatggcggcac
ttcaaagatgcggctggcctgctcacgccagtggaggaggacatgttccacctgcgtggt
ggcggcctggccccccagctgtacctgcgccccaaggagaccgcccacatccccttcaag
taccagactttctctcttggtcagccggctgcaacacaggcctctgctgaactgaggccc
gagcagggcgtggacaccgaacctccctggaagtctagtgcagcgcccacgaaacatgct
aaggtcaccttccgggccagcagcggcaagcccctggccgtgctctgcttggccgtggag
ccccagccccatgtggtggaccagatcttccgcttctaccacccggagctcaccttcctg
aagaagtccatccgcctgcccccatggcacatgcttccaggcgcccctgtgggacccccc
ggcgaggaccccccaatccatgttcgatgtagtgaccccaatgtcatctgtgagacccag
aatgtgggccccggggagccccgagatgtgttcctgaaggtggccagtggtccaagccca
gagataaaggacttctttgtcaccatctacgtggatcgctggctggcagcacctgtccag
atctggcaggtccaccttcactccctgcagcgtgtggacgtctcctgcgtcacaggccag
ctgacccgcctgtccctggtccttcgggggacacagacagttaggaaagtgagagccttc
acctcacacccccaggagctgaagatggacccacaaggtgtctttgtgctgccccctcat
ggcgtgctggacctgcatgtgggtgtgcggccccgccgggccggcagcaggttcgtccac
ctcaacctcgtcgatgtggacttccaccagctggtggcctcctggctcatctgcctctcg
tgccgccagcctctcatttccaaggcctttgagatcacgatggctgtgggtgaagggaag
ggagccaacaagcggatcacctacaccaacccctacccatcccggagggtgtaccacctg
cacagcaaccaccccgacctgctgcagttcaaggaggactcctttgaggtcggaggaggc
gagacctacacaatcagcctccggtttgccccaagtcagagtcctggggaggaggagatt
ctgatctacatcaacgaccatgaagacaaaaatgaagagacgttttgcgtgaaggtcatc
taccagtaa
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