KEGG   Trichechus manatus latirostris (Florida manatee): 101350431
Entry
101350431         CDS       T05135                                 
Name
(RefSeq) syndecan-4
  KO
K16338  syndecan 4
Organism
tmu  Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04512  ECM-receptor interaction
tmu04514  Cell adhesion molecule (CAM) interaction
tmu04820  Cytoskeleton in muscle cells
tmu05205  Proteoglycans in cancer
tmu05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:tmu00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    101350431
   04514 Cell adhesion molecule (CAM) interaction
    101350431
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    101350431
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    101350431
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    101350431
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:tmu00535]
    101350431
Proteoglycans [BR:tmu00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   101350431
SSDB
Motif
Pfam: Syndecan
Other DBs
NCBI-GeneID: 101350431
NCBI-ProteinID: XP_023580233
UniProt: A0A2Y9QLW5
LinkDB
Position
Unknown
AA seq 197 aa
MVPARLLALLLLLVSVPSATAESIRETEVIDPQDLLASRYFSGALPDDEDVGGPDEFELS
GSGDLDDSEDPRIFPEVIQPLVPLDNHIPERAGPVNRVPSEPKELEENEVIPKRISPFEG
DEDVSNRVSMSSTAQGSGIFERTEVLAALIVGGVVGILFATFLVLLLVYRMKKKDEGSYD
LGKKPIYKKAPTNEFYA
NT seq 594 nt   +upstreamnt  +downstreamnt
atggtccccgcccgcctgctcgcgctgttgctgcttcttgtgagcgtccccagcgccact
gcggagtcgatccgagagaccgaagtcatcgacccgcaggacctattagcaagccgatac
ttctctggagctctgccggacgatgaggatgtggggggccccgatgagtttgagctgtcc
ggctctggagatctggatgactcggaggaccccaggatcttccctgaagtcatccaaccc
ttggtgcctctagataaccacattcctgagagggcagggcctgtgaaccgggtcccctcc
gaacccaaggagctagaggagaatgaggtcatccccaagaggatctcgccttttgaaggg
gatgaggatgtgtccaacagggtgtccatgtccagcactgcccagggcagcggcatcttt
gagaggacagaggtcctggcagctctgattgtgggtggcgtcgtgggcattctttttgcc
acgttcctggtcctgctcttggtgtaccgcatgaagaagaaggatgaaggcagctacgac
ctgggcaagaaacccatctacaagaaagcccccaccaatgagttctacgcgtga

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