Trichechus manatus latirostris (Florida manatee): 101350561
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Entry
101350561 CDS
T05135
Name
(RefSeq) dmX-like protein 2 isoform X1
KO
K24155
rabconnectin-3a
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
101350561
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101350561
Membrane trafficking [BR:
tmu04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
101350561
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
101350561
RAVE complex
101350561
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
WD40
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WD40_WDHD1_1st
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
WDR55
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_HPS5
EIF3I
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_Vps41
Beta-prop_VPS8
Beta-prop_DCAF4
Beta-prop_WDR19_1st
Beta-prop_DCAF12
Beta-prop_WDR75_1st
Beta-prop_LRRK2
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_RIG_1st
Motif
Other DBs
NCBI-GeneID:
101350561
NCBI-ProteinID:
XP_012411350
UniProt:
A0A2Y9G0K7
LinkDB
All DBs
Position
Unknown
AA seq
3056 aa
AA seq
DB search
MHLHQVLTGAVNPGDNCYSVGSVGDVPFTAYGSGCDIIILANDFECVQIIPGAKHGNIQV
SCVECSNQHGRIAASYGNAVCIFEPLGINSHKRNRQLKCQWLKTGQFFLSSVTYNLAWDP
QDNRLLTATESVQLWAPPGGDILEEEEEIGNSILPVLNDWRCIWQCKTSVSVHLMEWSPD
GEYFATAGKDDCLLKVWYCMTGWKSSIIPQDHHEVKRRQACTQFSFVYLAHPRAVTGFSW
RKTSKYMPRGSVCNVLLTSCHDGICRLWAETLLPEDCLLGEQICETTTSSIASNLSHAGI
HKDRIQHALETIHHLKNLRKGQRRSSVLVTHNELMPDQMGTHEVQRHISHHANVLCHFHI
AASINPATDIPNVLAGTAFNADDGIGGFVVHWLNNKEFHFTSSAEIFMQQLRKLSEKQAD
YENDDADREDEEHSMEEREKGLHMKLDHELSLDRESEAGTGSSEHEDGEREGSPRAYSRP
SVPMPLPTVLLDRKIEMLLTEWNKNPDMLFTIHPMDGTFLVWHVKYLDEYNPGIFRQVQV
SFSSRIPVAFPSGDASSLSKNIMMYACINATKDSHHTLLHREMMAVGSPHASQPHSRAHS
PNMNILAPTVMMVSKHIDGSLNQWAVTFADKSAFTTVLTVSHKFRYCGHRFHLNNLACHS
VLPLLLTSSHHNALLTPESDSDNKLSRLMDPIKHIKCSSKQPLRNAATRTFHDPNAIYSE
LILWRVDPIGPLSYTGGVSELARINSLHTSAFSNVAWLPTLIPSYCLGTYCNSASACFVA
SDGKNLRLYQAVVDARKLLDELSDPESSKLIGEVFNIVSQQSTARPGCIIELDAITNQCG
SNTQLLHVFQEDFIIGYKPHKEDLEKKEIEIFFQPSQGYRPPPFSEKFFLVVIEKDSNNY
SILHMWHLHLKSVQACLAKAAEGVSSESLLSVPGQKDVDSSPETSPRVSHMPHSSSIANL
QTASKLILSSRLVYSQLLDLPEGVEVIRATPSAGHLSSSSIYPVCLAPYLVVTTCSDNKV
RFWKCCMETNSQCNSDEKEPYHWRRWPLMNDEGEDNSSTVSIVGRPVAVSCSYTGRLAVA
YKQPIHHNGFVSKEFSMHVCIFECESTGGSEWVLEQTIHLDDLVKVGSVLDSRVSVDSNL
FVYSKSDAFLSKDRCLIPNIKHLVHLDWVSKEDGSHILTVGVGANIFMYGRLSGIVTEQT
NSKDGVAVITLPLGGSIKQGVRSRWVLLRSIDLVSSVDGTPSLPVSLSWVRDGILVVGMD
CEMHVYAQWKHAVKFGDIETDIPDAEETAIQDHSAFKSNILARKSIVEGTALADDVFCSP
TVVQDGGLFEAAHVLSPTLPQYHPTQLLELMDLGKVRRAKAILSHLVKCIAGEVAIVRDA
DAGEGTKRHLSRTISVSGSTAKDTVTIGKDGTRDYTEIDSIPPLPLHALLAADQDTIYRT
SEESNKIPQSYKDHTKSQPEDQYSELFQIQDVTTDDIDLEPEKRENKSKVINFSQYGPAY
FGQEHARVLSSHLMHSSLPGLTRLEQMFLVALADTVATTSTELDENGDKSYSGRDTLDEC
GLRYLLAMRLHTCLLTSLPPLYRVQLLHQGVSTCHFAWAFHSEAEEELINMIPAIQRGDP
QWSELRAMGIGWWVRNINTLRRCIEKVAKASFQRNNDALDAALFYLSMKKKAVVWGLFRS
QHDEKMTTFFSHNFNEDRWRKAALKNAFSLLGKQRFEQSAAFFLLAGSLKDAIEVCLEKM
EDIQLAMVIARLYESEFETSSTYIAILNEKILGCQKDGSGFNCKRLHPDPFLRSLAYWIM
KDYTRALDTLLEQTPKEEDEHQVIIKSCNPMVFSFYNYLRTHPLLIRKNLASPEGTLATL
GLKTEKSYVDKINLIERKLFFTTANAHFKVGCPVLALEVLSKIPKVTKISALPAKKDQPD
FIPKKIDDVSSESRTLRYGNASSGIDWSNAASSQIDWSQPKVKVDEEPLNLDWGEKHDND
SALEEEEEDGVGLVMKSTDDRGKDRQEDQKVPDPNMLLTPQEEDSLEGDTEVDVIAEQLK
FRACLKILMTELRTLATGYEVDGGKLRFQLYNWLEKEIAALHEICNHESVIKGYYGNTYS
KEESNLPDQEETVDKPDIGSYERHQIERRRLQAKREHAERRKLWLQKNQDLLRVFLSYCS
LHGAQGGGLASVRMELKFLLQESQQETTVKQLQSPLPLPTTLPLLSASIASTKTVIANPV
LYLNNHIHDILYTIVQMKTPPHPNIEDVKVHTLHSLAASLSASIYQALCDSHCYSSQTEG
NQFTGMAYQGLLLSDRRRLRTESIEEHATPNSSPAQWPGVSSLINLLSSAQDEDQPKLNV
LLCEAVVAVYLSLLIHALATNSSNELFRLAAHPLNNQMWAAVFGGGAKLVVKPRRQSENI
SAPPVPSEDVDKHRRRFNMRMLVPGRPVKDATPPPVPAERPSYKEKFIPPELSMWDYFVA
KPFLPLSDCGIIYDSDESIHSDEEEDDTFFSDTQIQEHQDPNSYSWALLHLTVVKLVLHN
VRNFFPIAGLEFSELPVTSPLGIAVIKNLENWEQILQEKMDQFEGPPPNYINTYPTDLSV
GAGPAILRNKAMLEPENTPFKSRDSSALPVKRLWHFLVKQEVLQETFIRYIFTKKRKQSE
SVEEHVEQVRQNCIAEDSHIKVEADLGYPGGKAKVVHKESDMIMAFSVNKANSNEIVLAS
THDVQELDITSLLACQSYIWIGEEYDRESKSSDDVDYRGSTTTLYQPSAASCSAIQVHPP
SSLPWLGSGQTSTGASVLMKRNLHNVKRMTSHPVHQYYLTGAQDGSVRMFEWTRPQQLVC
FRQAGNARVTRLYFNSQGNKCGVADGEGFLSIWQVNQTASNPKPYMSWQCHSKAASDFAF
ITSSSLVATSGQSNDSRNVCLWDTLISPGNSLIHGFTCHDHGATVLQYAPKQQLLISGGR
KGYVCIFDIRQRQLIHTFQAHDSAIKALALDPCEEYFTTGSAEGNIKVWRLTGHGLIHSF
KNEHAKQSIFRNIGAGVMQIDIIQGHRIFSCGADGTLKTRVLPNAFNIPNRILDIL
NT seq
9171 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgcatcaggtcctcactggggctgtcaaccctggagacaactgctactccgtg
ggcagcgtcggggatgtccccttcacggcatatggatcaggctgtgatattattattttg
gcaaatgactttgaatgtgtgcagatcattcctggtgctaagcatggaaacatccaagtc
agctgtgtggagtgttctaaccaacatggaagaattgcagcttcatatggtaatgctgtt
tgtatttttgagcccttgggcataaattctcataagagaaatcgtcaactgaagtgtcaa
tggcttaaaactgggcagttttttttgagttctgtgacgtacaacttagcatgggacccg
caagataacagattgttgacagcaaccgagtctgttcagttgtgggctcctccaggaggt
gacattctggaagaggaggaagaaattggtaacagcattcttcctgtcttaaatgattgg
agatgcatctggcagtgcaaaacctcagtatctgtacatttgatggaatggtctcctgat
ggtgaatattttgctaccgctggaaaggatgattgtcttttgaaagtgtggtactgtatg
actggttggaagtcttcaattatacctcaagatcatcacgaagtgaaaaggaggcaggcg
tgtactcagttttcctttgtttacttggcacatccccgagctgtaacagggttttcatgg
cgtaaaactagcaagtatatgcccaggggctctgtctgtaacgtactattaacttcatgc
catgatggtatctgccgactctgggcagaaaccttattaccagaagactgtcttttgggt
gagcagatttgtgaaacgaccacttccagcattgccagcaatctttctcatgctgggata
cacaaagacagaatacagcatgctcttgagacaatacaccatttgaaaaatttaagaaaa
ggacaaagaagatcttctgttcttgtaactcacaatgaattaatgcctgaccagatggga
acacatgaagttcagagacacatttcccaccatgctaatgtgctgtgtcattttcacatt
gctgcaagcatcaaccctgccacagatattccaaatgtcttggctggcactgcatttaat
gctgatgatggaattgggggctttgtagttcattggttaaacaacaaggaatttcatttt
acgtcatctgctgaaatatttatgcagcaattacgaaaactttctgaaaagcaggcggat
tatgaaaatgatgatgctgacagagaggatgaggaacattcaatggaggaaagagagaag
ggtttacatatgaaactagaccatgaattatccctggatagagaatctgaggcaggtaca
ggatcatcagaacatgaagatggagaaagagaggggagtcctagagcctactcacgacct
agcgtaccaatgccactgcctacagtcctgcttgatcggaagattgaaatgctgctaact
gaatggaataagaatcctgacatgctttttacaatacaccctatggatggtacctttcta
gtgtggcacgtaaagtacttggatgaatacaatcccgggatatttagacaagttcaggtt
tctttttcttctcggattcctgttgcatttccctctggtgatgcaagctctcttagtaaa
aatattatgatgtatgcctgcataaatgctacgaaagattctcaccacactctgctacac
cgagagatgatggctgtaggcagtcctcatgcatcacagccgcactctagggcacacagt
ccaaatatgaacattttagctcctacagtaatgatggtctctaaacacatagatggttct
ttaaatcagtgggcagtcacttttgctgataaatctgctttcaccactgttctaactgta
tctcacaaattcagatactgtggtcatcgatttcacctcaacaatctggcatgccactca
gttttacccctgttattgacatcatctcatcataatgctcttttgactcctgaatcagat
tcagataataaattaagtagactaatggatcctataaaacacataaaatgttcctcgaag
caacctcttagaaatgcagcaacacgtacatttcatgacccaaatgcaatctacagtgaa
cttattttgtggcgtgtagacccaataggacctttgtcatacactggaggagtttcagaa
ttggctcgaattaattctttacatacctcagccttctctaatgtggcttggcttccaact
cttattcccagctattgtcttggcacatactgcaattctgcaagtgcttgctttgttgct
tctgatggcaaaaatttgagactctatcaagctgtggtagatgcaaggaaattattggat
gaactgtcagacccagagtcgtcgaaacttattggagaggtgtttaacattgtgagccaa
cagtctactgctcgacctggctgcattattgaacttgatgcaataaccaaccaatgtggc
tcaaatacacagttgcttcatgtgtttcaagaagacttcattataggatataaaccacat
aaggaagatttggagaaaaaggaaatagaaatattttttcagccatcacaaggatatcgc
ccaccaccattttcagaaaagttctttctagtagtaattgaaaaggacagcaataattac
tctattctccatatgtggcaccttcatcttaaatctgtacaagcatgtttagccaaagct
gcagaaggtgtttcatcagagagtctgctttcagtccctggacagaaggatgtagactcc
tctccagaaacctctcctagagtgagccacatgccacattcctcatcaattgccaatctt
cagaccgctagtaaacttattctgagctctagactggtatatagccagctcctcgacctc
ccagaaggagttgaagtaataagagcaacaccctcagcaggccatctgagttcttcttca
atttatccagtgtgtcttgctccttatttggtggttacaacttgttccgacaataaagtt
cgcttctggaaatgttgcatggaaaccaattcacaatgtaacagtgatgagaaagaaccc
tatcattggaggagatggcccttgatgaatgatgaaggagaagataatagcagtacagtg
agcattgtgggaagaccagttgctgttagctgttcatacacaggtcgccttgcagtggct
tacaagcaacctatccaccacaatggttttgtttctaaagaattttccatgcatgtttgt
atatttgaatgtgagtctacaggagggtcagaatgggttttagaacaaacaattcatctt
gatgatttggttaaggttgggagtgtgcttgattcaagggtcagtgttgacagcaacctg
tttgtatatagcaaatcagatgcatttttgagtaaggatagatgccttattccgaatata
aagcatttagtgcatttggactgggtatcaaaagaagatggctcccacattctcacagtg
ggggttggtgctaatatattcatgtatgggcggctttcaggaattgtgactgagcaaacc
aacagcaaggatggagtagctgtcattactttaccactaggtggtagtattaagcaagga
gtgaggtcaagatgggttcttcttagatctatagacttggtatcttctgttgatggtaca
ccttcactgcctgtttctctctcttgggtaagagatgggatattggtggtgggaatggac
tgtgaaatgcatgtatatgcacagtggaagcatgctgtcaaatttggagacattgaaacg
gatattcctgatgcagaagagacagcaatacaagatcattctgcctttaaatctaatata
ttggcaagaaaaagtattgttgaaggaacagctcttgctgatgatgttttttgttcacca
actgtagttcaagatggtggcttatttgaggctgcacatgtactttcccccactcttccc
cagtatcatccaactcaactgttagaattgatggacttagggaaagttcgaagggctaaa
gccattctctctcatttagtaaaatgtattgcaggtgaagttgcaatagttagagacgct
gatgctggagaaggaactaagcgacatctctctcgcaccatcagtgtgagtggcagtaca
gcaaaggatacagtcaccataggaaaagatggtactcgagattatactgagatagactct
attcctccactaccactacatgcattgcttgctgcagaccaagatacaatctacagaact
tcagaagagagtaacaaaataccacagagctacaaagatcataccaaaagtcagccagag
gaccagtattcagagctcttccaaatccaggatgtaacaacagatgatattgatttagag
ccagaaaagagagaaaacaaatcaaaagtaataaatttttcccaatatggaccagcttac
tttggccaagaacatgctagggtactttcaagtcaccttatgcactcaagtctaccaggc
cttacccgtttagaacagatgttccttgtcgctttggctgatacagtggctaccaccagt
actgagcttgatgaaaacggagataagagttactcaggaagagacacgctagacgagtgt
gggctgagatacttgttagctatgcgcttgcacacatgccttttgacatcactgcctccg
ttataccgagtgcagctacttcatcaaggtgtgtctacatgccatttcgcctgggccttt
cattccgaggctgaggaagaactgattaatatgattcctgcaattcagagaggggaccct
cagtggtctgagttaagagctatgggaataggttggtgggtcaggaatattaacactctt
cgaagatgcattgaaaaggttgctaaagcttcttttcaaaggaacaatgatgccttggat
gctgccttgttctatctttcaatgaagaagaaagcagtagtgtggggtttgtttaggtca
cagcatgatgaaaaaatgacaacatttttcagccacaactttaatgaagataggtggcgt
aaagctgctttgaaaaatgctttttctttacttggaaaacaacggtttgaacaatctgct
gcttttttcttgttagctggttcattgaaagatgccatagaggtatgtcttgaaaaaatg
gaagatattcagctagctatggttattgcacgtttgtatgaatctgaatttgagacttca
tccacttatatagccatcttaaatgagaagattttgggttgccagaaggatggctcagga
ttcaattgcaaaagattacatcctgatcctttcctgcgtagtcttgcctattggattatg
aaagattatacccgagctttggacacgttactggaacaaacaccaaaggaggaggatgaa
catcaagttatcatcaaatcttgtaacccaatggtgtttagtttttacaactaccttcga
actcatcctttgcttattcgaaagaaccttgcctcccctgaaggaactttggcaacctta
gggctcaaaactgagaaaagctatgttgataaaattaacctcatagaaagaaaattattc
tttaccactgcaaatgctcattttaaagttggctgccctgttttagccttggaagtactt
tccaaaattccaaaagtaaccaaaatatctgccttacctgcaaaaaaagatcagcctgac
ttcattcctaaaaagatagatgatgtctcttcagaatcacgaactctgagatatggcaat
gcaagctctggcattgattggtcaaacgcagcttcatcacagatcgactggagtcagcca
aaagtaaaagttgatgaggaacctcttaatcttgactggggtgaaaaacatgataatgat
agtgccttagaagaagaggaagaagatggcgttggtttagtaatgaaaagtacagatgac
aggggaaaagatagacaagaagatcagaaagtcccagaccctaatatgttactgactcct
caggaagaggattctcttgaaggcgatactgaagttgatgtgattgctgaacagctaaaa
ttcagagcctgcttaaagattctcatgacagaactaaggacactggctacaggttatgaa
gtagatggaggaaaactcagatttcaactctataactggcttgaaaaggaaattgctgcc
ttgcatgagatatgtaatcatgaatcagttattaaaggatattatggtaacacatattcc
aaagaagagagtaatcttccggatcaggaagaaacggtggacaaaccagatattggttcc
tatgagcgccaccaaatagaaagacgaagattgcaggctaaacgagagcatgcagaaaga
cgaaagttgtggttgcagaaaaaccaagatctcctaagggtgtttcttagttattgcagc
cttcatggggcccaaggtgggggactggcctcagtgagaatggaactcaaatttttgcta
caagaatcccagcaggaaactacagtaaagcagctccagtctccactcccattgcccact
accctccctctgctttcagcaagtattgcttcaaccaaaacagtcatagctaatcctgta
ttgtacttaaataatcacatccatgatatactttatacaattgttcagatgaaaacgcca
cctcatcccaatattgaagatgtgaaggtgcacacacttcattcactagcagcgtcgctt
tctgcatcaatttaccaagcactatgtgacagtcactgctacagcagtcaaactgaagga
aatcagtttacaggaatggcttatcaaggacttcttttaagtgaccgccgaagactaagg
acagaaagcattgaagaacatgcaacaccgaattcatctcctgctcaatggcctggtgtg
agctcacttattaatctgttgagttcagcccaagatgaagatcagccaaagttgaacgtt
ttgttgtgtgaagctgtcgttgctgtttacttaagtttattgatccatgctcttgccaca
aattcctccaatgaattgtttcgacttgcagcccacccactaaataatcaaatgtgggct
gctgtctttggagggggtgcaaaactggttgtgaagcctcgaagacaatcggaaaatatt
tcagcaccaccagttccttccgaagatgtagataaacaccgtaggcgatttaacatgcga
atgctcgtccctggaaggcctgtaaaagatgctaccccaccaccagtgcctgcagaaaga
ccatcttacaaagaaaaattcattcctcctgaacttagtatgtgggattattttgtcgca
aagccatttcttcctttgtctgattgtggtattatatatgattcagatgaaagcattcat
agtgatgaagaggaagatgacacttttttttcagatacgcaaatccaagagcaccaagat
ccgaattcctatagctgggctctactccatttgacagtggttaagctggtactccacaat
gtcaggaatttctttcctattgctggattggaattttctgagctgcctgtaacatcacca
ttaggtattgctgtgattaaaaacttggagaactgggaacagatcctacaagagaaaatg
gatcaatttgaaggcccaccccctaattacatcaatacatatcccactgacctttcagta
ggagctggaccagctattcttcgaaataaagcaatgctagaacctgaaaatactccattt
aaatcccgggattcttctgcactgccagtcaaacgactttggcatttccttgttaaacaa
gaagtccttcaagaaacatttattagatacattttcactaagaaaagaaagcagagtgag
tctgtagaagaacatgtggagcaggtcagacaaaactgcatagcagaagactcccacatc
aaggttgaagctgacctgggctatccaggtggaaaggcaaaagtcgttcataaagaatcg
gatatgatcatggcgttttcagttaataaggcaaactctaatgaaattgttttggcttca
acacatgatgttcaagaacttgacattacttccctcttggcctgtcagtcatatatatgg
attggggaagaatatgacagagaatccaaaagttcagatgatgttgattatcgtggttcc
actacaactctttaccagcccagtgcagcatcctgttcagcaattcaggtgcacccacct
tcctctctgccatggctgggcagtggacagactagcactggagctagtgtgcttatgaaa
aggaatctacacaatgttaagcgaatgacttcacacccagtccatcagtactatcttaca
ggagctcaggatggcagtgtacgaatgtttgaatggacccggcctcagcagcttgtgtgc
ttccgccaggcaggcaatgcaagagttaccagattatattttaactcacaaggcaacaag
tgtggtgttgcagatggagagggttttctgagtatctggcaagtaaaccaaacagcatca
aatcccaaaccttacatgagttggcagtgccacagtaaagctgcgagtgactttgcattt
attacctcttcaagtctagttgccacatctggacagtccaatgacagtaggaatgtgtgc
ctctgggacacattgatatcacctggaaacagcctcattcatggtttcacatgccatgat
catggtgccacggtgctgcaatatgcaccaaaacagcaactcctcatctctggaggcagg
aaaggctatgtctgcatttttgacatcaggcagagacagctaattcacacattccaggca
catgactcagctattaaggccctagctctggatccctgtgaagaatattttactacaggt
tcagcagaaggtaacataaaggtttggagattgacgggccatggcctaattcactcattt
aaaaatgaacatgcgaaacagtccatattcagaaacattggggctggagtcatgcagatt
gacatcatccagggccatcggatcttctcctgtggtgcagatggcacgctcaaaacaagg
gttttaccaaatgcttttaacatccctaatagaattcttgacattctatag
DBGET
integrated database retrieval system
