Trichechus manatus latirostris (Florida manatee): 101351006
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Entry
101351006 CDS
T05135
Name
(RefSeq) helicase SRCAP
KO
K11661
helicase SRCAP/SWR1 [EC:5.6.2.-]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101351006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tmu03036
]
101351006
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Chromatin remodeling factors
SRCAP complex
101351006
SWR1 complex
101351006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HSA
ResIII
DEAD
HDA2-3
Motif
Other DBs
NCBI-GeneID:
101351006
NCBI-ProteinID:
XP_023596806
UniProt:
A0A2Y9RT72
LinkDB
All DBs
Position
Unknown
AA seq
3227 aa
AA seq
DB search
MQSSPSPAHPQLPILQTQMVSDGMTGSNPVSPASSSSPASSGAGGISPQHLAQDSSLDGP
PGPPDGATVSLEGLSLPQAADLANKGPKWEKSHAEIAEQAKHEAEIETRIAELRKEGFWS
LKRLPKVPEPPRPKGHWDYLCEEMQWLSADFAQERRWKRGVARKVVRMVIRHHEEQRQKE
ERARREEQAKLRRIASTMAKDVRQFWSNVEKVVQFKQQSRLEEKRKKALDLHLDFIVGQT
EKYSDLLSQSLNQPLASSKAGSSPCLGSSHTGSAASSPPPPASRLDDEDGDFQPQEEEED
DEETIEVEEQQEGNDAETQRREIELLRREGELPLEELLRSLPPQLLGGPSSPSETPSSHD
SDTRDEPEEGGEEETSRVLKVKPPPSSVTQRNKQPWHPDEDDEEFTANEDEAEDEEDTIA
AEEQLEGEVDHAMELSELAREGELSVEELLQQYAGAYASDTSAPGSGSSEEEEEEEEVEA
NSSDCEPEEGTEAEEAPQEDSSSQSDSAEEQSEDEEDEHSEEEETSGSSESEESESEDSE
EAQSRSQADEEEKEDEDFGVEYLLAQDEEQSEADGGSGPPTPGPTTTLGPKKEITDIAAA
AESLQPKGYTLATTQVKTPIPLLLRGQLREYQHIGLDWLVTMYEKKLNGILADEMGLGKT
IQTISLLAHLACEKGNWGPHLIIVPTSVMLNWEMELKRWCPSFKILTYYGAQKERKLKRQ
GWTKPNAFHVCITSYKLVLQDHQAFRRKNWRYLILDEAQNIKNFKSQRWQSLLNFNSQRR
LLLTGTPLQNSLMELWSLMHFLMPHVFQSHREFKEWFSNPLTGMIEGSQEYNEGLVKRLH
KVLRPFLLRRVKVDVEKQMPKKYEHVIRCRLSKRQRCLYDDFMAQTTTKETLATGHFMSV
INILMQLRKVCNHPNLFDPRPVTSPFITPGICFSTASLVLRATDVHPLQRIDMGRFDLIG
LEGRVSRYEADTFLPRHRLSRRILLEVATAPDPPPRPKPVKMKVNRMLQPVPKQEGRTVV
VVNSPRTPLGPVPVRPPSGPELSAQLTPGSTPPVLPAPLMVSASTTGPPLIPASRPPGSV
LLPPLQPNSGPLPQVLPSPLGVLGGTSRPATPTLSLKPAPPAPVRLSPAPPPGSSSMLKP
LTVPPGYTFSPPAATTSATAATATTTAVPAPTPAPQRLILTPDMQARLPSGEVVSIGQLA
SLAQRPVASAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHHLI
SQPAHVALIQAVAPTPGPSPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTMVNNTGVVKI
VVRQAPRDGLTSVPPLAPAPRPPSSGLPAVLTPRPTLTPGRLPTPTLGTSRAPIPTPTLV
RPLLKLVHSPSPEVSASAPGAAPLTISSPLPVPSSLAGPASSPMPVPNSSPLASPVSSTV
PAPVSSSLPISVSTALPAPASAPLTIPISASLPVSASGPALLTTVTPTLASVVSAVPGPP
SLAPAGASPSASALTLGLATTPSLSPSQAPGHPLLLAPTSSHVPGLNSAVAPACSPVLVP
ASALANPFPAAPNPAPAQASLLAPAPSTSQALATSLAPMAAPQTAILAPSPAPSVAPLPV
LASSQSPVPVLAPSSTPGIPLASASSLVPASTPVLAPSSTQTMVPAPVLPPLPSLASTQT
LAVAPALASSLGGSSPSQTLSLGTGNPQGPFPAQTLSLTPASSLVPAPAQALSLAPGPPL
GPTQTLSLAPAPPLAPASPMGLSPAHTLTLAPASSSASLLAPASVQTLALSPTQVPVPTL
GPAAASTQAPTSQPSSLVVSASGSAPFPVTMVSRLPVPKDEPETLTLRSGPPSPPSTATS
FSGPRPRRQPPPPPRSPFYLDSLEEKRKRQRSERLERIFQLSEAHGALAPVYGTEILDFC
TLPQPVASPIGPHAPGPNHPTFWTFTEAARRAVLFPQQRLDQLSEIVERFIFVMPPVEAP
APSLHACHPPPWLAPRQAAFQEQLACELWPRARPLHRIVCNMRTQFPDLRLIQYDCGKLQ
TLAVLLRQLKAEGHRVLIFTQMTRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFN
ADKRIFCFILSTRSGGVGVNLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYRL
ISERTVEENILKKANQKRMLGDMAIEGGNFTTAYFKQQTIRELFDMPLEEPSNSSVSSAP
EEEEEAVASKQTHILEQALCRAEDEEDIRAATQAKAEQVAELAEFNENDGFPAGEGEEAS
RPGAEDEEMSRAEQEIAALVEQLTPIERYAMKFLEASLEEVSREELKQAEEQVEAARKDL
DQAKEEVFRLPQEEEEGPGAGDEVSCGTGGGSHRRSKKIKAPERPGTRVSERLRGARAET
QGANHTPVTPTQHTRSTSTHPCSSPARERTPRLAPRARPTPAPATPVSVPVPVPVPISSP
NPITILPVHILPPPPPLPPSQIPPSCSPACTPPPACTPPPAHTPTPAHTPPPAPTPLLTP
SSSLLLGPSSVPISPSGTNLPLGLGPEAELCAQALASPESLELTGMASSEASPLTLVSPE
ELLPVAVEVLPMSEKNLSLTPSAPSPILEAGSILNGQEQEVPEPAQGTVLAVLPDGEGVP
MCLNESNGVELPPSVASDELLQVPLEAPRNSEELIEAQTPISSPEKLQELVTAEVTAPST
SSSVTSSPESPSPARPPRRRTSADVEIRGQGAGRPGQPPGPKVLRKLPGRLVTVVEEKEL
VRRRRQQRGTASTPAPVVSETGASLGSPSTRSTSGRDSSPPTSGPCEASPPSTLPTQTQQ
PFIARRRIELGVTGGGSPENGERALLDITPPAVKRRRGRPPKKNRSPADSGQGVDEAPSS
TSKGKTNGADPVPGAETLIVAEPVVGPQLIPGSHPLGPQSVHKHESIILSPVEKRRRGRP
PKARDLPIPGTISSPGNGNLESRTQPLPLPPPLPSFPPLLACPTASVANTVTTVTISASP
PKRKRGRPPKNPPSPRPSQLPVLDRDSSSVAESCGLGKQQQPQGQGDSEGSSSDEDGGRP
LTRLARLRLEAEGTRGRKSEGSMVVAVIQDDLDLAESGPGGLELTPPVVSLAPKLRSTRL
RPGSLVPPLETEKVPRKRAGAPIGGGPGQAKRGRPQPPSPLGPEGSIEESEAEASGEEEE
GDGTPRRKPGPRRLGGTNQGDQRILRSSAPPHLAGSIISHRGRKAKT
NT seq
9684 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagcccctcccctgctcaccctcaactcccaatcctgcagacacagatggtg
tcggacggcatgacaggcagcaatcctgtgtcccctgcctcatccagttccccagcctct
agtggggcaggtggcatctccccccagcacctagctcaagattcttctctggatggacct
ccaggccccccagatggcgccacagtgtccctggaggggctcagcttaccccaagctgct
gacctggccaacaagggcccaaagtgggagaagagtcatgccgaaattgcagagcaggcc
aagcatgaggctgagattgagactcggattgctgaactccggaaggagggtttctggtca
ctgaagaggctgcctaaggtgccagagcccccccgccccaaaggccactgggactatctg
tgtgaagaaatgcagtggctctctgctgactttgctcaggagcgtcgttggaaacggggt
gtagcccgcaaggtggtgcgcatggtgatccggcaccacgaggagcagcggcagaaagaa
gagcgggctcggagggaggagcaggccaagctgcgccgaattgcctccaccatggccaag
gatgtcaggcagttctggagcaacgtggagaaggtagtgcaattcaagcagcagtctcgg
cttgaagaaaagcgcaaaaaagctctggatctgcacttggacttcattgtagggcaaact
gagaagtactcggaccttctgtcacagagcctcaaccaaccactagcctccagcaaagct
ggctcctccccttgccttggctcttcccacactggctcagctgcctctagccctccaccc
cctgcttcccggctggatgatgaagatggggacttccaaccccaagaggaggaagaggat
gatgaagagacgattgaggttgaagaacaacaggaaggcaatgatgcagagacccagagg
cgtgagattgagctgcttcgacgtgagggagaactgccactggaagagctgctccgttcc
ctgccccctcagctgctaggagggccttccagcccctcagaaaccccttcatctcatgat
agtgacacccgagatgagcctgaagaaggtggtgaagaggagacctctcgggtgttgaag
gtaaaacccccaccctcatctgtcacgcaacgcaacaaacagccttggcatccagatgaa
gatgatgaagagtttactgccaacgaggatgaagcggaggatgaagaggacaccatagca
gctgaggagcagttggaaggggaggtggatcatgccatggagctgagcgagttggctcga
gaaggggagctgtctgtggaggagctactgcagcagtatgcaggggcctatgcctctgat
acctcagccccaggttctgggagcagtgaagaggaagaggaagaagaggaggttgaggct
aacagctctgactgtgaaccagaggaaggcacagaagctgaagaggctcctcaagaggat
agtagcagtcagtcagactctgctgaggagcagagcgaggatgaggaagatgagcattca
gaggaggaagaaacaagtgggagttcagaatcagaggaatcggagtctgaggattctgag
gaggcccagtcacggagccaagcagatgaggaggaaaaagaagatgaggactttggggtg
gaatacctgctggcccaggatgaagaacagagtgaggcagatgggggcagtggtcctcct
accccagggcccaccaccactctaggccctaagaaagaaattactgacattgctgcagct
gctgaaagtctccagcccaagggttacaccttggccactacccaggtgaagacgcctatc
cccctcctcctgcggggccagctccgggagtaccaacacattggactggactggctggtt
actatgtatgagaagaagcttaatggcattcttgctgatgagatggggctgggcaagacg
atccagaccatctccctgcttgcccacttggcctgtgagaaaggtaattggggtccccat
ttgatcatcgtccccaccagtgtgatgttgaactgggaaatggagttgaaacgctggtgc
cccagctttaaaatcctcacttattatggagcccagaaagagaggaagctcaagcggcag
ggctggaccaagcccaatgccttccatgtgtgtatcacgtcttacaagctggtgctgcag
gaccatcaggccttccgtcgcaagaactggcgctatctcattttggatgaggctcagaac
atcaagaacttcaagtcacagcgctggcaatcactgctcaatttcaacagccagaggcgc
ctactcctgacagggactcccttgcagaacagcctcatggagctgtggtccttgatgcac
tttttgatgcctcatgtcttccagtctcatcgcgagttcaaggagtggttctctaaccct
ttaactggcatgattgagggcagccaagagtataatgaagggctagtcaaacgcctccat
aaggttttgcggccctttttgctgcgccgagttaaggtggatgttgagaagcagatgccc
aagaagtatgagcacgttatccgctgccggctttctaagcgccaacgctgtctctacgat
gacttcatggcacagaccacaactaaggagacactagctacgggccattttatgagcgtc
atcaacattttgatgcagctccggaaagtctgcaatcatccaaacttgtttgaccctcgg
cctgttacctcccctttcatcaccccaggcatctgcttcagcaccgcctctctggtgctg
cgggccactgatgtccaccctctccagcggatagatatgggtcggtttgaccttattggc
ctggagggtcgcgtctctcgatatgaggctgacacctttctgccccgacaccgcctctcc
cgtcggatactgctagaggtggctactgctccggaccccccaccccggcccaagccagtc
aaaatgaaggtcaacaggatgctgcagccagtgcctaagcaagaaggccggacagtggtg
gtggtgaacagcccacggacgcccctgggccctgtcccagtccgacccccttcaggccct
gagctctcagcccagctcacccctggctcaacccccccggtgctgccagcgccactgatg
gtgtcggcctcaaccactgggcccccgcttattccagcatctcggccacctggctctgtt
ctgttgcccccgctgcagccgaacagtggtccccttccccaggtgttgccatcccccttg
ggagtcctgggtgggacctcacggcctgccacgccaaccctgtccctgaagccagctccg
cctgccccagttcgcctcagcccagccccacccccaggctcctccagtatgttgaagccc
ctgacggtgccaccaggctacaccttctctcctcctgctgccaccacttccgccaccgca
gccactgctaccaccacagcagtacctgctccaactcctgcgccacagcgcctcatcttg
actcctgatatgcaggctcgcctgccctcaggcgaagtggtcagcattggacagttggcc
tcactggcacaacgaccagtggctagcgcagggggaagcaaacctctcaccttccaaatc
cagggcaacaagctgactttgactggtgcccaggtgcgccagcttgctgtggggcagccc
cgcccgctgcaaaggaatgtggtgcacctggtgtcagcaggggggcagcaccacctcatc
agccagcctgcccatgtggccctcatccaggccgtggccccgacccctggcccttcccct
gtctctgtgctgccttcttcgacccccagcaccacccctgcccccactggtctcagcctt
ccgcttgctgctaaccaggtgccaccaaccatggtgaataatacaggcgtggtgaagatt
gtagtgagacaggcccctcgggatggactgacttctgttcctccattggccccagcgcct
cggcctccgagctctgggcttccagctgtgttgactccacgccccacattaacccctggc
cggctacccacacctactctgggtacttcacgggcccccatacccacgcccactctggtg
aggcctcttctcaagctggtccacagtccttcgcctgaagtcagtgcttcagcacccgga
gctgctccattgaccatctcttctcctctccctgtgccatcctcactcgctgggccagct
tcatctccaatgccagttcccaactcctctccgcttgctagtccagtgtcctccacggtc
ccagccccagtctcatcttcactccccatctctgtctctactgcacttcctgccccagcc
tcagctccactcaccattcccatctcagcctccttacctgtttcggcttcgggcccagct
ctgttgaccactgtgactccaacactggcatctgttgtctcagcagttcctggacctccc
tctttggctccagctggggcttccccatcagcatcagccttgactctaggtttggccaca
actccatccctgtccccatctcaggcacctggtcatcctctgttgttggctcccacctct
tcacacgttccagggttgaactcagctgtggccccagcgtgctcacccgtcctggtgcca
gcttcagctctggccaatccttttccggcagcgccaaacccagctccagctcaggcttcc
cttctggctccagcaccttctacatctcaggccctggccacctctctggctcccatggcg
gctccacagacagcaatcctggctccttctccagctccttctgtggctcctcttccagtc
ctggcctcatcgcagtctccagttccagtcctggctccgtcatctactccgggaatccct
ttagcctcagcatcttcactggtgccagcctcaactcctgtgttggctccatcgtcaact
cagactatggtaccagccccagttctgccacctctcccgagcctggcttctacacagaca
ctggccgtagccccagctttagcatccagtcttggtggctcgtctccatctcagacactc
tctttgggaacagggaacccccaggggccctttccagctcagacattgtcattgactcca
gcatcatcgcttgtaccagctccagcacaggcactctctttggcaccagggccaccactg
ggtccaactcagacactgtctctagctccagcaccccctttggctccagcttctccgatg
ggcctgtccccggctcacacactgactttggctccagcatcgtcatctgcttcactcctg
gccccagcttcagtgcaaacactggccttgagccctacccaagttccggtgcctaccctg
ggcccagctgcagcctccacacaggccccaacttctcagccatcttcccttgtggtttcg
gcatctggctctgctccctttcctgtcaccatggtatcccggctgcctgttccaaaggat
gagcctgagacactgacattgcgctctggtccccccagcccgccctccactgctacctcg
ttcagtggccctcggcctcgacgccagcccccaccaccacctcgttcccctttctatctg
gattctctggaggaaaagcggaagcgacagcgatctgaacgtctggaacggattttccag
cttagcgaggctcatggggccctggcacccgtgtatgggactgaaatcctggatttctgt
accctaccccaacctgttgccagccccatcggccctcatgctcccggccccaaccacccc
accttttggacttttaccgaggctgcccgcagggctgtactgtttccccagcaacgacta
gaccagctgtcagaaatcgttgagaggttcatctttgtcatgcctcctgtggaggcacct
gccccttccctacatgcctgccacccacctccttggttggccccacgtcaggcagccttc
caggagcaattggcctgtgagctctggccccgggctcgtcctttacaccgtattgtgtgt
aatatgcgcacccagttccctgacttaaggctcatccagtatgattgcgggaagttgcaa
acgttggcagtgctgctgaggcagctcaaggcagagggacaccgggtgctcattttcact
cagatgacccgaatgctggatgtattggagcagttccttacttaccacggccacctctac
ttacgtctggatgggtctactagagttgagcagagacaggccttgatggaacggttcaat
gcagacaaacgcatattctgcttcatcctttcaactcggagtggaggtgtgggtgtaaac
ctgacaggagcagacactgttgtcttttatgacagtgactggaatcccaccatggatgct
caggcccaggatcgctgtcaccgaattggccagacccgagatgtccacatctataggctt
atcagtgaacggacagtggaggagaacattcttaaaaaagcaaatcagaagagaatgttg
ggagatatggccattgagggaggcaacttcaccacagcctattttaaacagcagaccatc
cgagagctgtttgatatgccgctagaggagccatctaactcatctgtatcctccgcccct
gaagaggaggaagaggctgtggctagcaagcagacccatatcctggagcaggcattgtgt
cgagcagaggatgaagaagatatccgtgcggccactcaggccaaggctgaacaggtggcc
gagcttgcagaattcaatgagaatgatgggtttcctgctggtgagggagaagaggccagt
cggcctggggctgaggatgaggagatgtcccgggctgagcaggaaatagctgcccttgta
gaacagctgactcccattgagcgctatgccatgaaattcctggaagcctcgctggaggaa
gtgagccgtgaggagctcaaacaggcagaagagcaagtggaagctgcccgcaaggacctg
gaccaagccaaggaagaggtgtttcgcctaccccaagaggaggaggaggggccaggggct
ggggatgaggtttcctgtgggacaggtggaggcagccaccggcgcagtaagaagatcaag
gctcctgagaggccggggactcgagtcagtgagcgtcttcgtggagcccgggctgagact
caaggggcaaaccacactcccgtcacacctacccaacatacccgtagtacatccacacac
ccctgcagcagccctgccagggagcgaactccccggctggcgcctagggctcgacccact
ccagctcctgctaccccagtctctgtcccagtccctgtcccggtccccatttcatcccca
aatccaataaccattcttcctgtccatatcttgcctcctcctccccctcttcctccttcc
cagattcctccctcttgttctcctgcctgtactcctcctcctgcctgtacccccccacca
gctcacacccccacaccagctcatacccccccaccagcacctacccctcttctaactcct
tcctcctctcttctgcttggtccatcttctgtgcctatttccccctctggcacgaacctc
cccttgggcttagggcctgaggcagagttgtgtgcacaagcattggcatctcctgagtcc
ctggagctcactggcatggccagttctgaggcttccccactcactcttgtgtcccccgag
gagctgttgccagttgctgttgaagtcctgcccatgtcagagaagaacctttctctcact
ccttctgcacctagcccaatcctggaggctggcagcatccttaatggtcaagaacaggag
gtgccagaacctgcccaggggacagttcttgcagtgctgcctgatggtgagggggtaccc
atgtgtctgaatgagagcaatggggtggagctcccaccctctgtagcatctgatgagcta
cttcaggtgccattggaggctcccaggaactctgaagagctgatagaggcccagacccca
atctccagcccagagaagctgcaggaacttgttacagcagaggtcacagccccatcaacc
tcatcctcagtcacctcctcacctgagagtccttcaccagcccggccacctcggcgtcgc
accagtgccgatgtagaaattcggggtcagggggctggtcgtccagggcagcctccgggc
cccaaagtgcttcgcaagctgccaggacggctagtaactgtggtagaggagaaggagctg
gtgaggagacggcgacagcaacggggaactgccagcaccccagcacctgtggtttctgag
acgggtgcaagcctgggaagcccatctacccgcagcacgtcagggcgggattcttcacct
cccacgagcgggccctgtgaagcttctccgccatccacactgcccacccaaacccagcaa
cccttcatagctcgtcgtcgcattgagttgggggtgactggtggaggcagcccagagaat
ggagaaagggcgctgcttgacatcaccccacctgctgtgaagcgccggagagggaggccc
ccgaaaaaaaacaggtctccggcagattctgggcaaggggtggatgaagcaccctcatcc
acctctaagggaaaaaccaatggggctgatccagtccctggggcagagaccctcattgtt
gcggagcctgttgtaggaccccagcttattcctgggtcccaccctcttggaccccagtca
gttcacaaacatgagtccatcatcttgtcacctgtggagaaaagaaggcgtgggcggcct
cctaaggcacgagatttgcccatccctgggaccatttcttctccagggaatggcaactta
gagagccggacacagccactcccactcccgccacccctgccatccttcccaccactccta
gcctgtcccaccgctagtgtcgccaacactgtcaccaccgtcactatttcagcgtcccca
cccaagcgcaagcggggccgacctcccaagaatccaccatcacctcggcccagtcagctc
cctgtcttggaccgtgacagctcttcggtcgctgagagctgtggactggggaagcagcag
caaccccagggccagggagacagtgagggcagttcttctgatgaagatggaggccgcccc
ctcacccgcctggcccgcctacgacttgaagcagagggaacgcggggacgaaagagtgaa
gggtccatggtggtggctgtaattcaagatgacctggatttagcggagagtgggccaggc
gggttggaactgactcctcctgtggtctcgttagccccaaaactgcgctcgacccggctg
cgtccagggtctctagtccccccactagagaccgagaaggtgcctcgcaaacgggcaggg
gctccaattggtgggggtcctgggcaggcaaagcgaggccgtcctcagcccccaagcccc
ctggggcctgagggttctatagaggagtctgaggctgaagcctcaggtgaggaggaggaa
ggggatgggaccccacgccgcaagcctggcccccgccggcttggtgggaccaaccaaggg
gaccagcgcatcttgcgcagcagtgcccctccccacctggctggctctatcattagtcac
agaggccgcaaggccaagacgtga
DBGET
integrated database retrieval system
