Trichechus manatus latirostris (Florida manatee): 101351066
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Entry
101351066 CDS
T05135
Name
(RefSeq) transcription activator BRG1 isoform X2
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03082
ATP-dependent chromatin remodeling
tmu04714
Thermogenesis
tmu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101351066
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101351066
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101351066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101351066
03036 Chromosome and associated proteins [BR:
tmu03036
]
101351066
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101351066
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
101351066
Chromatin remodeling factors
BAF complex
101351066
PBAF complex
101351066
GBAF(ncBAF) complex
101351066
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Motif
Other DBs
NCBI-GeneID:
101351066
NCBI-ProteinID:
XP_004378386
UniProt:
A0A2Y9DP85
LinkDB
All DBs
Position
Unknown
AA seq
1647 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGTMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMDSMHEKGMSDDPRYNQMKGMGMRSGGHAGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGAPLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTPQ
KLIPPQPTGRPSPAPPTVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKPRG
LDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQEV
VVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNSIL
QHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENAEGQTPAIG
PDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSEES
GSEEEDEEEEEEQPQPAQPPALPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEYGV
SQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILADE
MGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSPAA
RRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTH
YVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEE
TILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLLTD
GSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRASG
KFELLDRILPKLRATSHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLK
TFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR
VLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDESR
HCSTGSGSASFAHTAPPPAGVNPDLEEPPLKEEDEVPDDETVNQMIARHEEEFDLFMRMD
LDRRREEARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKMFGRGSRHRKEVDYS
DSLTEKQWLKAIEEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQ
KKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYEL
IRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSV
RQKIEKEDDSEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQDRLKGSRRRPSRGS
RAKPVVSDDDSEEEQEEDRSGSGSEED
NT seq
4944 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagacccacccttgggcggaactcctcggccaggcccttccccgggcccg
ggcccctcccctggaaccatgttgggccctagtcccggtccctcaccgggctctgctcac
agcatgatggggcccagccctgggcccccctcagcaggacaccccatcccgacccaggga
cctggagggtatcctcaggacaacatgcaccagatgcacaagccaatggattccatgcac
gagaagggcatgtcggacgacccacgctacaaccagatgaaagggatggggatgcgttcg
gggggccatgcagggatggggcccccgccaagcccaatggaccagcattctcaaggttac
ccctcacccctgggtggctcagagcacgcctccagtccagttccagccagtggcccatcc
tcaggcccacagatgtcgtctgggccaggaggggccccgctggatggtgctgacccccag
gccttggggcagcagaaccggggcccaaccccatttaaccagaaccagctgcaccagctc
agagctcagatcatggcatataagatgctggcccgggggcagcccctccctgaccaccta
cagatggcggtgcagggtaagcggccgatgcccgggatgcagcagcagatgccaacacta
cctccgccctccgtgtccgcaacaggacctggacccggccctggccctggccccggccca
ggtccaggaccagcacctccaaattacagcaggcctcacggtatgggagggcccaacatg
cctcccccaggaccttcaggtgtgccccctgggatgccaggacagccccccggagggcct
cccaagccctggcctgaaggacccatggcaaatgctgctgcccccaccagcacacctcag
aagctgatccccccgcagccgacgggccgcccttcacccgcaccccccaccgtcccgccc
gccgcctcgccagtgatgccgccccagacgcagtccccggggcagccggctcagcccgct
cccatggtgccgctgcaccagaagcagagccgcatcacccccatccagaagccacggggc
ctcgaccctgtggagatcctgcaggagcgggagtacaggctgcaggctcgcattgcacac
cgaattcaggaacttgaaaatcttcccggatccctggctggcgatttgcgaaccaaagcg
accattgagctcaaggccctcaggctgctgaacttccagaggcagctgcgccaggaggtg
gtggtgtgcatgaggagggacacagccctcgagacagccctcaacgccaaggcctacaag
cgcagcaagcggcagtccctgcgcgaggcccgcatcacagagaagctggagaagcagcag
aagatcgagcaggagcgcaagcgccggcagaagcatcaggaatacctcaatagcattctt
cagcacgccaaggatttcaaagaatatcacagatcggtcacaggcaaaatccagaaactc
accaaggcagtggctacgtatcacgccaacacagagcgggaacagaagaaagaaaacgaa
agaattgagaaggagagaatgcggcggctcatggctgaagacgaggagggctaccgcaaa
ctcatcgaccagaagaaggacaagcgcttggcctacctcttgcagcagacggatgagtac
gtggctaacctcacagagctggtgcgacagcacaaggccgcccaggttgccaaggagaag
aagaagaaaaagaaaaagaagaaggcagagaacgcggaaggacagacgcctgccatcgga
ccggatggcgagcctctggatgagaccagccagatgagcgacctcccagtgaaagtgatc
catgtggagagcgggaagatcctcacaggcacagatgcccccaaagcagggcagctggag
gcctggctcgagatgaacccagggtatgaagtagctccaagatctgatagtgaagaaagt
ggctcagaagaggaggatgaggaggaggaggaagagcagccgcagccggcacagcctcct
gccctgcctgtggaggagaagaagaagattccagatccagacagcgacgacgtctctgag
gtggatgcacggcacatcattgagaatgccaagcaagatgttgatgatgaatacggtgtg
tcccaggccctggctcgtggcctgcagtcctactacgccgtggcccatgctgttactgag
agagtggacaagcagtcggctctgatggtcaacggcgtcctgaagcagtaccagatcaaa
ggcctggagtggctggtgtctctgtacaacaacaacctgaacggcatcctggccgacgag
atgggtctggggaagaccatccagaccattgcgctcatcacgtacctcatggaacacaag
cggatcaacgggccctttctcatcatagtgcctctctcaacactgtcaaactgggcgtac
gaattcgacaagtgggccccctctgtggtgaaggtgtcctacaagggctcaccagcagca
agacgtgcttttgtccctcagctccgaagcggaaagttcaacgtcttgctgacgacgtac
gagtacatcatcaaagataagcacatcctcgccaagatccgttggaagtacatgatcgtc
gacgaaggccaccgcatgaagaaccaccactgcaagctgacccaggtcctcaacacgcac
tacgtggccccccgccgcctgctgctgacaggcacaccactgcagaacaagctccccgag
ctctgggcgctgctcaacttcctgctgcccaccatcttcaagagctgcagcacctttgag
cagtggttcaacgcaccctttgccatgactggagagaaggtggacctgaatgaggaggaa
accattctgattatccgtcgtctccacaaagtgctgcggcccttcctgctccgacggctc
aagaaggaagttgaggcccagttgcccgaaaaggtggagtacgtcatcaagtgcgacatg
tctgcactgcagcgcgtgctgtaccggcacatgcaggccaagggcgtgctcctgaccgac
ggctccgagaaggacaagaagggcaaagggggcaccaagaccctgatgaacaccatcatg
cagctgaggaagatctgcaaccacccctacatgttccagcacattgaggagtccttttct
gagcacttggggtttactggcggcatcgtccaagggttggacctgtaccgagcctcgggt
aaatttgagcttctcgataggattcttcccaaactccgagcaaccagccataaagtgctg
ctgttctgtcaaatgacctccctcatgacaatcatggaagattattttgcatatcgtggc
ttcaaatacctcaggctcgatggaaccacaaaagcagaggaccggggcatgctgctaaaa
accttcaatgagcccggctccgagtacttcattttcctgctcagcactcgtgcagggggg
cttgggctgaacctccagtcggccgacactgtgatcattttcgacagtgactggaatccc
caccaggacctgcaggcgcaggaccgagcccaccgcatcgggcagcagaacgaggtgcgg
gtgctccgcctctgcacggtcaacagtgtggaggagaagattctggccgccgccaagtac
aagctcaatgtcgaccagaaggtgatccaggccggcatgttcgaccagaagtcctccagc
cacgagcggcgtgcgttcctgcaggccatcctcgagcacgaggagcaggacgagagcaga
cactgcagcacgggcagcggcagtgccagcttcgcccacactgcccctccgccagcgggc
gtcaaccccgacttggaggagccacctctaaaggaagaagacgaagtccccgatgatgaa
accgtcaaccaaatgattgcccggcacgaagaggagtttgatctgttcatgcgcatggac
ctcgaccgccggcgtgaggaggcccgcaacccgaagcggaagccgcgcctgatggaggag
gacgagctcccctcgtggatcatcaaggatgacgccgaggtggagcggctgacctgcgag
gaggaggaggagaagatgttcggccgcggctcccgccaccgcaaggaggtggactacagc
gactcgctgactgagaagcagtggctcaaggctatcgaggagggtacgctggaggagatc
gaagaggaggtccggcagaagaaatcgtcacggaaacgcaagcgggacagcgacgccggc
tcctccacgccgactaccagcacccgcagccgtgacaaggatgacgagagcaagaagcag
aagaagcgcgggcggcctcctgccgagaagctctcccccaacccacccaacctcaccaag
aagatgaagaagatcgtggatgccgtgatcaagtacaaggacagtagcagtggacgtcag
cttagcgaggtgttcatccagctgccctcacgcaaggagctgcccgagtactatgagctc
atccgcaagcccgtggactttaagaagataaaggagcgcattcgcaaccacaaataccgc
agcctcaatgacctggagaaggacgtcatgctgctgtgccagaacgcgcagaccttcaac
ctggagggctcgctgatctatgaagactccattgtcctgcagtcggtcttcaccagcgtg
aggcagaaaattgagaaggaggatgacagtgaaggcgaggagagcgaggaggaggaggag
ggcgaggaggaaggctcagagtctgagtcccgctcagtcaaagtgaagatcaagctcggc
cggaaggagaaggcgcaggatcggttaaaggggagccgccggcggccgagccgcgggtcc
cgggccaagccggttgtgagcgacgatgacagtgaggaggagcaggaggaggaccgctca
ggaagtggcagcgaggaagactga
DBGET
integrated database retrieval system
