Trichechus manatus latirostris (Florida manatee): 101351185
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Entry
101351185 CDS
T05135
Name
(RefSeq) LOW QUALITY PROTEIN: neurofilament heavy polypeptide
KO
K04574
neurofilament heavy polypeptide
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu05014
Amyotrophic lateral sclerosis
tmu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
101351185
05022 Pathways of neurodegeneration - multiple diseases
101351185
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tmu04812
]
101351185
Cytoskeleton proteins [BR:
tmu04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
101351185
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
DUF1388
RasGAP_C
Motif
Other DBs
NCBI-GeneID:
101351185
NCBI-ProteinID:
XP_023597538
UniProt:
A0A2Y9S0G7
LinkDB
All DBs
Position
Unknown
AA seq
1042 aa
AA seq
DB search
MMSFGGADALLGAPFPPLPGGGGLYYALGRKGGAGGARSAAGSSSGFHSWARTSASSVSA
SPGRFRGAAAVSSTDSLDTLSNGPEGCVVAARSEKEQLQVLNDRFAGYIDKVRQLEAHNR
SLEGEAAALRQQQAGRAAMGELYERELREMRGAVLRLGAARGQLRLEQDHLLEDIAHVRQ
RLDDEARQREEAEAAARALARFAQDAEAARGELQKKAQALQEECGYLRRHHQEEVGELLR
QIQGCGAAQAQAQAEARDALKCDVTSALREIRAQLEGHTVQSTLQSEEWFRVRLDRLSEA
AKVNTDAMRSAQEEITEYRRQLQSRTTELEALKGTKDSLERQRSELEERHQADIASYQEA
IQQLDTELRNTKWEMAAHLREYQDLLNVKMALDIEIAAYRKLLEGEEYRIGFGPSPLSLP
EVFPKVPSTTTHIKVKSEEKIKVVEKSEKETVILEEQMEEVQVTEEVTEEEEKEAKEEEG
KEGEEEKAEKGEEEAKSPPAEEAISPEKEVKSPAKEEAKSPAEAKSPEKAKSPVKEEAPS
PAKVKSPEKAKSPLKEEAKSPAEVKSPEKAETPVKEEAKSPAEVKSPEKAKSPVKEEAKS
PVKEEAKSPAEVKSPEKAKTPVKEEAKSPTEVKSPEKAKTPVKEXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEKAKTPVKEEAKSPTEVK
SPEKAKTPVKEEAKSPAEVKSPEKAKSPVKEEAKSPEKAKTLDVKSPEAKTPVKEEIRSP
ADIKSPEKPKTPVKEEVKSPEKVKSPVKEDAKAPEKEVPKKEEAKSPMKEEKPQEVKVKE
PPKKVEEEKAPATPKTEEKDSKKDEVPKKGAPKPEVEEKKEPTVEKPKESKVEAKKEETE
DKKKAATPEKEAPAKVEVKEEAKPKEKVEVAKKEPDDAKAKEPGKPAAKEPEKPKKEEAP
AAPEKKDTKEEKATEAKKPEEKPKTETKAKEEEKPVAKEPSKEAPKPSKPEMEKAEKSSS
TDQKDSRPPEKAPEDKAPKGEK
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcttcggcggcgccgacgcgctgctgggcgccccgttcccgccgctgcccgga
ggtggcggcttgtactacgcgctgggccgcaagggcggcgcgggcggagcgcgctccgcg
gccggctcgtccagcggcttccactcgtgggcgaggacatccgcgagctccgtgtccgcc
tctcccggccgcttccgcggagcggccgccgtctcaagcaccgattcgctggataccctg
agcaatgggccagagggctgcgtggtggcggcgcgcagcgagaaagagcagctgcaggtg
ctgaacgaccgcttcgcgggctacatcgacaaggtgcggcagctcgaagcgcacaaccgc
agtctggaaggcgaggcggcggccctgcggcagcaacaggcgggccgcgccgccatgggc
gagctctatgagcgcgagttgcgcgagatgcgcggcgctgtgctgcgcctgggcgcggcg
cgcggccagttgcgtctggagcaggatcacctactcgaagacatcgcgcacgtgcgccag
cgtctcgacgacgaggcccgacagcgcgaggaagccgaggcggcggcgcgtgcactggcg
cgcttcgcgcaggatgccgaggcggcgcgcggcgagctgcagaagaaggcgcaggcgctg
caggaggagtgcggctacctgcgtcgccaccaccaggaggaggtgggcgagctgctccgc
caaatccaaggctgcggcgccgcgcaggcgcaggcccaggccgaagcgcgcgacgccctc
aagtgcgacgtgacgtcggcactgcgcgagatccgcgcgcaactcgagggccatacggtg
cagagcacgctgcagtccgaggagtggttccgagtgaggctggaccggctgtcggaggca
gccaaggtgaacacagatgccatgcgctcagcacaggaggagataactgagtaccgacgt
caactgcagtccaggaccacagagctggaggcactgaaaggcaccaaggactcactggaa
aggcagcgctctgagctggaggaacgacatcaggctgacattgcatcctaccaagaagct
attcagcagctggacactgagctgaggaacaccaagtgggagatggcagcccatctccga
gagtaccaggacctgctcaatgtcaaaatggctctggatattgagattgctgcttacaga
aaactcctggagggagaagaatatcggattggctttggcccaagtcctttgtcccttcct
gaagtattccccaaagttccctccacaaccacccacataaaggtcaaaagtgaagagaag
atcaaggtggtagaaaagtcagagaaagaaactgtgattttggaggaacagatggaggag
gtccaagtgactgaagaagtgactgaagaagaagaaaaagaggccaaagaggaggaaggc
aaggagggagaagaggagaaagcagaaaagggagaagaagaagcaaaatctcctccagca
gaagaagctatatccccagagaaggaggtcaagtcccctgcaaaggaagaagcaaaatca
ccagctgaggccaagtccccagagaaggccaagtcccctgtgaaggaagaggcaccatct
ccagccaaagtcaaatccccagagaaggccaagtcccctctaaaagaagaagcaaaatcg
ccagctgaagtcaagtctcctgagaaggccgagacacctgtgaaggaagaagcaaagtct
ccagctgaggtcaagtccccagagaaagccaagtccccagtgaaggaagaagcaaagtcg
ccagtgaaagaagaagcaaaatctccagctgaggtcaagtccccagagaaggccaagacc
ccagtgaaggaagaggccaaatctccaacagaggtgaaatccccagagaaggccaagacc
ccagtgaaggaangannnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnccagagaaggccaagaccccagtgaaggaagaggccaaatctccaacggaagtcaaa
tccccggagaaggccaagaccccagttaaggaggaagctaagtccccagcagaggtgaag
tccccagagaaggccaagtccccagtgaaggaagaagcaaagtcccctgagaaggccaag
actcttgatgtgaaatccccagaagccaagacaccagtgaaggaggaaataaggtcccct
gcagacatcaagtcccctgaaaagcccaaaactcctgtcaaggaagaggttaagtcccca
gagaaggtcaaatctcctgtgaaggaagatgccaaggctcctgagaaggaggtcccaaag
aaggaagaggcaaagtctcccatgaaagaggagaaaccccaggaggttaaagtcaaagag
cccccaaagaaggtggaggaagagaaggctccagccacaccaaaaactgaggagaaggac
agcaagaaagatgaggtgcccaagaagggggctccaaagcctgaggtagaggagaagaag
gaacctactgtagagaagcccaaagaatccaaagttgaagccaagaaggaagagactgaa
gataagaaaaaagcagcgaccccggagaaggaggctcctgctaaagtggaggtgaaggaa
gaggctaaacccaaagagaaggttgaggtggccaagaaggagccagatgatgccaaggcc
aaagaacccggcaagccagctgcgaaggaaccggaaaagcctaaaaaggaagaagcaccc
gcagcaccagagaaaaaagacaccaaggaggagaaggctacagaggccaagaagcctgag
gagaaacccaaaacagagaccaaagccaaggaggaagagaagcctgtcgcaaaagagccc
agcaaggaggcccccaagcccagcaaacccgagatggaaaaggctgaaaaatcctctagc
acagaccaaaaagatagcaggcctccagagaaggctccagaggacaaggcccccaagggg
gagaagtaa
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