Trichechus manatus latirostris (Florida manatee): 101351248
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Entry
101351248 CDS
T05135
Name
(RefSeq) vacuolar protein sorting-associated protein 18 homolog
KO
K20181
vacuolar protein sorting-associated protein 18
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04140
Autophagy - animal
tmu04148
Efferocytosis
tmu05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101351248
04148 Efferocytosis
101351248
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
101351248
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101351248
Membrane trafficking [BR:
tmu04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
101351248
Hops complex
101351248
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pep3_Vps18
Clathrin
zf-RING_5
zf-C3HC4_2
zf-RING_Vps41
zf-RING_16
KNOX2
zf-ANAPC11
zf-RING_2
zf-RING_UBOX
zf_RING_Vps8
zf-rbx1
WD40_Prp19
CNH
zf-C3HC4
Motif
Other DBs
NCBI-GeneID:
101351248
NCBI-ProteinID:
XP_004380699
UniProt:
A0A2Y9DT51
LinkDB
All DBs
Position
Unknown
AA seq
973 aa
AA seq
DB search
MASILDEYEDSLSRSAVLQPGCPSVGIPHSGYVNAQLEKEVPIFTKQRIDFTPSERITSL
VVSCNQLCMSLGKDTLLRIDLGKANEPNHVELGRKDDAKVHKMFLDHTGSHLLMALSSTE
VLYVNRNGQKVRPLARWKGQLVESVGWNKALGTESSTGPILVGTAQGQIFEAELSASEGG
LFGPAPDLYFRPLYVLNEEEGPAPVCSLEAERGPDGRGFVIATTRQRLFQFIGRAAEGTE
AQGFSGLFAAYTDHPPPFREFPSNLGYSELAFYTPRLRSAPRAFAWMMGDGVLYGALDCG
RPDSLLSEERVWEYPEGVGPGASPPLAIVLTQFHFLLLLADRVEAVCTLTGQVVVRDHFL
EKFGPLKHMVKDSSTGQLWAYTERAVFRYHVQREARDVWRTYLDMNRFDLAKEYCRERPD
CLDTVLAREADFCFRQHRYLESARCYALTQSYFEEIALKFLEARQEEALTEFLQRKLAGL
KPTERTQATLLTTWLTELYLSRLGALQGDPEALTLYRETRDRFRTFLSSPRHKEWLFASR
ASIHELLASHGDSEHMVYFAVIMQDYERVVAYHCQHEAYEEALAVLTRHRDPQLFYKFSP
ILIRHIPRQLVDAWIELGSRLDARQLIPALVNYSQGGEAQQVSQAIHYMEFCVNVLGETE
QAIHNYLLSLYARGQPASLLAYLEQAGTSPHRVRYDLKYALRLCAEHGHHRACVHVYRVL
ELYEEAVDLALQVDVDLAKQCADLPEEDEELRKKLWLKIARHVVQEEEDVQTAMACLASC
PLLKIEDVLPFFPDFVTIDHFKEAICNSLKAYNHHIQELQREMEEATASAQRIRRDLQEL
RGRYGTVEPQDKCAACDFPLLNRPFYLFLCGHMFHADCLLQAVRPGLPAYKQARLEELQR
KLGAAQPLAKGSARALEAEAGAVAGGPSREQLRADLDELVAAECVYCGELMIRSIDRPFI
DPQRYEEEHLSWL
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccatcctggacgagtacgaggactcgctttcccgctcggcggtcctgcagccc
ggctgccccagcgtgggcatcccccactctggttatgtgaatgcccagctggagaaggag
gtgcccatcttcacgaagcagcgcatcgacttcaccccttccgagcgcatcaccagtctt
gttgtctcctgcaatcagctctgcatgagcctgggcaaggatacgctgctccgcattgac
ttgggcaaggccaacgagcccaaccatgtggagctggggcgcaaggatgatgccaaagtt
cacaagatgttcttggaccacactggctctcacctgctgatggctctgagcagcaccgag
gtcctctatgtgaaccgtaacggacagaaggtccggccgctggcacgttggaaggggcag
ctggtggagagcgtgggctggaacaaggcgctgggcaccgagagcagcacaggccccatc
ctggtcggcaccgcccagggtcagatcttcgaagcagagctctcagccagcgagggtggg
ctttttggccctgcccccgatctctacttccgtccactctacgtgctgaatgaagaagag
ggtccagcacctgtgtgctccctggaggccgagcggggccctgatggacgtggctttgtg
atcgccaccacccggcagcgcctcttccagttcataggcagagccgcagaggggactgag
gcccagggcttctcggggctctttgctgcctacactgaccacccacccccgttccgtgag
ttccccagcaatctgggatacagcgagttggccttttatacccccaggctgcgctcggca
ccccgggccttcgcctggatgatgggggacggcgtgttgtatggagcactggactgtggg
cgtcccgactccctgctgagcgaggagcgggtctgggagtacccggaaggggtgggtcct
ggggccagcccgcccctggccatcgtcctgacccagttccacttcctgctgctgctggca
gaccgagtggaggcagtgtgcacgctgacggggcaggtggtggtgcgggatcacttcctg
gagaagttcgggccgctgaaacacatggtgaaggactcgtccacaggccagctgtgggcc
tacacggagcgggctgtcttccgctaccacgtgcagcgggaggcccgggacgtctggcgc
acctacttggacatgaaccgcttcgacctggccaaggagtattgtcgagagcggcctgac
tgcctggacacagtcctagcccgtgaggccgatttctgctttcgccagcataggtacctg
gagagcgcccgctgctatgccctgacccagagttactttgaggagattgccctcaagttc
ttggaggcccgacaggaggaagctctaactgagttccttcagcggaaactggccggtttg
aagccaaccgagcgtacccaggccacgctgctcaccacctggctgacggagctctacctg
agccggctcggggctcttcagggcgacccggaggccttgaccctctaccgggaaacacga
gaccgcttccgcaccttcctcagcagcccccgccacaaggagtggctctttgccagccgg
gcctccatccacgaactgcttgccagccacggggactcggagcacatggtgtactttgct
gtcatcatgcaggactacgagcgggtggtggcataccactgccagcacgaggcctacgag
gaggccctggctgtgctcacccgccaccgtgacccccagctcttctataaattctcaccc
atcctcatccgtcacataccccgccagctggtcgatgcctggattgagctgggcagccgg
cttgatgcccggcagctcatccccgccctggtgaattacagccagggtggcgaggcccag
caggtgagccaggccatccactacatggagttctgcgtgaacgtgctgggcgagaccgag
caggccatacacaactacctgctgtccctgtacgcccgcggccagcctgcctcgctgctg
gcctacctggagcaggcagggaccagcccgcaccgtgtgcgctacgacctcaagtacgcg
ctgcggctctgcgctgagcacggtcaccaccgcgcctgcgtccatgtctacagggtgctg
gagctgtacgaggaggccgtggacctggccctgcaggtggacgtggacctggccaagcag
tgcgcggacttgccggaggaggacgaggaactgcgcaagaagctgtggctgaagatcgcg
cggcacgtggtgcaggaggaggaagacgtgcagacggccatggcctgcctggccagctgc
cccctgctcaagattgaggacgtgctgcccttctttcccgacttcgtcaccattgaccac
ttcaaggaggccatctgcaactccctcaaggcctacaaccaccacatccaggagctgcag
cgggagatggaggaggccacagccagcgcccagcgcatccggcgggacctgcaggagctg
cgaggccgctacggcaccgtggagccccaggacaaatgtgccgcctgtgatttccccctc
ctcaaccgccctttttacctctttctctgtggccacatgttccacgctgactgcctgctg
caggccgtgcggcctggcctacccgcctacaagcaggcccggctggaggagctgcagcga
aagctgggggccgctcagcccctggccaagggctctgccagggccctggaggcagaggct
ggggccgtggctgggggcccgagccgggagcagctcagggctgacctggacgagctggtg
gccgcggagtgcgtgtactgtggggagctcatgatccgctccatcgaccggcccttcatt
gacccgcagcgctacgaggaggagcatctcagctggctgtag
DBGET
integrated database retrieval system
