Trichechus manatus latirostris (Florida manatee): 101351361
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Entry
101351361 CDS
T05135
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tmu03036
]
101351361
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
101351361
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
CHDCT2
CHDII_SANT-like
Helicase_C
CHDNT
PHD
DUF1087
Chromo
PHD-1st_NSD
HDA2-3
ResIII
PHDvar_NSD
HTH_Hrp3
DEAD
PHD_2
HMG_box
AAA_22
Motif
Other DBs
NCBI-GeneID:
101351361
NCBI-ProteinID:
XP_004385163
UniProt:
A0A2Y9E125
LinkDB
All DBs
Position
Unknown
AA seq
1817 aa
AA seq
DB search
MAEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSA
NNPFKGSSAAAAAAAVAAAVETVTIAPPLAISAQQAPQPVPIRKAKTKEGKGPGVRKKIK
GSKDGKKKGKGKKVAGLKFRFGGISNKRKKGSSSEEDEREESDFDSASIHSSSVRSECSA
ALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKA
PEGKWSCPHCEKEGIQWEPKDEEEEEEEGGCEEEEDDHMEFCRVCKDGGELLCCDACPSS
YHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFMVGLLGPDVEPGV
PPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYG
SGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRVLNHSFDKKGDVHYLIKWKDL
PYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDARLPKRLIKKSKKLKDDKQEKPPET
PIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIV
FLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTYTGDKESRSVIRENEFSF
EDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIEWACLVVDEAHRLKNNQS
KFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEFADISKEDQI
KKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGG
NQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLR
DEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFL
LSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEER
ITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEELFKDDVEGMMSQGQRPVT
PIPDVQSSKGGTMPASVKKKHGSTPPGDNKDVEDSSVIHYDDAAISKLLDRNQDATDDTE
LQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYWEKLLRHHYEQQQEDLAR
NLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSR
RQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNSIMRWGMPPQDAFNSHWLVRDLR
GKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEF
EHVNGKYSTPDLIPEGPEGKKPGEVISSDPNTPVPASPAHIPPAPLGLPEKMEAQLGYMD
EKEPGMQKPKKPLEIQALPTALDRVEGEEKHESSESKERAREERPEETEKAQSSPEQLPK
EEVLPEKEKILDKLELSLIHSRGDSSEFRPDDTKAEEKEPIETQQNGDKEEDEEGKKEDK
NGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRHDYWLLAGIVTHGYARWQ
DIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQD
PNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTR
LPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSSQMYNNNFGPNFRGPGPG
GIVNYNQMPLGPYVTDI
NT seq
5454 nt
NT seq
+upstream
nt +downstream
nt
atggccgagtggggcctggacgacgtggactacctgttctccgaggaggactatcacacg
ctaactaactacaaggctttcagccagttcctcaggccgctcatcgccaagaagaacccg
aagatccccatgtccaaaatgatgaccgtcctgggtgccaagtggcgggagttcagcgcc
aacaaccccttcaagggcagctcggcagcagcggcagcggccgcagtggctgcagcggtg
gagacagtcaccattgccccccctctggccatcagtgcccagcaggcaccccaaccagtg
cccatccgcaaggccaagaccaaggagggcaaggggcctggagtgaggaagaagatcaaa
ggctccaaagacgggaagaaaaagggcaaggggaaaaaagtggccgggctcaagttccgc
tttggagggatcagcaacaagaggaagaaaggctcctcaagtgaggaggatgagcgggag
gagtcggatttcgacagtgcaagcatccacagttcctctgtgcgctctgagtgctccgca
gccctgggcaagaagagcaagaggaggcgcaagaagaagaggattgacgatggtgacggc
tacgagactgaccaccaggactactgcgaggtgtgccagcagggtggggagatcatcctg
tgtgacacctgcccgcgggcctaccacctcgtctgcctcgacccggagcttgagaaggcc
cccgagggcaagtggagctgcccccattgtgaaaaggaggggatccagtgggagccgaaa
gatgaggaggaggaggaggaggagggcggctgcgaggaggaggaggacgaccacatggag
ttctgccgcgtgtgcaaggacggcggcgagctactctgctgcgacgcttgcccctcctcc
taccacctgcactgtctcaacccgccgctgcccgagatcccaaacggtgaatggctctgc
ccgcgctgtacttgtccccccctgaagggcaaagtgcagcggattttacactggaggtgg
acggagcccccggcccccttcatggtggggctgctggggcctgatgtggagcccggtgtc
cccccgcccaagcccctggagggcatcccagagagagagttctttgtcaagtgggctggg
ctctcttactggcactgctcctgggtgaaggagctgcagctggagctataccacacggtg
atgtatcgcaactaccaaagaaagaatgacatggatgagccaccgcccttcgactatggc
tctggtgacgaggatggcaaaagtgagaagaggaagaataaggaccctctctatgccaag
atggaggagcgcttctaccgctatggcatcaagcccgagtggatgatgatccatcgtgtc
ctaaaccacagctttgacaaaaagggggacgtccactacctgatcaagtggaaagacctg
ccttacgaccagtgcacctgggagattgatgacattgacatcccctactatgacaacctg
aagcaggcctactggggccacagggagctgatgctgggggaagatgccaggctgcccaag
aggctgatcaagaagagcaagaagctaaaggatgataaacaggagaagccgccggagacc
cccattgtggatcccacggtcaagtttgacaagcagccgtggtacattgactccacgggt
ggcacgctgcacccctaccagctggagggtctcaactggctgcgattctcgtgggcccag
ggcaccgataccatcttggccgatgagatggggctgggcaagaccgtgcagaccatcgtc
ttcctctactccttgtacaaggagggacactccaaagggccctacctggtcagtgcaccc
ctgtccaccatcattaactgggagcgcgagttcgagatgtgggcgcctgacttctacgtg
gtcacctacactggggacaaggagagccgctctgtgatccgcgagaacgagttttccttt
gaggacaacgcgattcggagtgggaaaaaggtgttccgcatgaagaaagaagtgcagatc
aagttccacgtgctgctcacctcatacgagcttatcaccattgaccaggccatcctgggc
tctattgagtgggcctgcctggtggtggatgaggcccaccggctcaagaacaaccagtcc
aagttcttcagggtcttgaatagctataagatcgactacaagctgctgctgacagggacc
ccccttcagaacaacttggaggagctcttccatctgctcaacttcctgactccggagagg
ttcaacaacctggagggcttcctggaggagtttgccgacatctccaaggaagaccagatc
aagaaactgcatgacctgctgggcccacacatgctgaggcggctcaaggctgatgtgttc
aagaacatgccagccaagactgaactgatcgtgcgcgtggagctgagccagatgcagaag
aagtactacaagttcatcctcactcggaactttgaagcgctgaactccaaggggggaggg
aaccaggtgtcgctgctcaatatcatgatggacctgaagaaatgttgcaaccacccctac
ctcttccccgtggccgctgtggaggcgcctgtcttgcccaatggctcctatgatggcagc
tccctggtcaagtcttcagggaagctcatgctgctgcagaagatgctcaagaagttgcgg
gatgaagggcaccgtgtgctcatcttctcccagatgaccaagatgctggacctcctggag
gatttcctggagtatgaaggctacaagtatgagcgaatcgatggtggtatcactgggggc
ctccggcaagaggctatcgacagattcaatgccccaggggcccagcagttctgcttcctt
ctctcgacccgggcgggtggcctgggcatcaacctggccacggcagacacagtcatcatc
tacgactcggactggaatccacacaatgacattcaggccttcagccgcgcccaccgcatt
gggcagaacaagaaggtgatgatctaccgcttcgtgacacgggcctcagtggaggagcgc
atcacccaggtggccaagcgcaagatgatgctgacccacctggtggtgaggcccggcctt
ggctccaagtcaggctccatgaccaagcaggagctggacgacatcctcaagtttggcacc
gaggagctcttcaaggatgacgtggagggcatgatgtctcagggccagaggcccgtcact
cccatcccagatgtccagtcctccaaagggggcaccatgcccgccagtgtgaaaaaaaaa
catggcagcaccccgccaggtgacaacaaggacgtggaggacagcagtgtgatccactat
gatgacgctgccatttccaagctgctggaccggaaccaggatgccacggacgacacggag
ctgcagaacatgaacgagtacctgagctccttcaaggtggcgcagtacgtggtgcgcgag
gaggacggtgtggaggaggtggagcgggagatcatcaagcaggaggagaatgtggatccc
gactactgggagaagctgctgcggcaccactacgagcagcagcaggaggacctggcacgc
aacctgggcaagggcaagcgcatccgcaagcaggtcaactacaacgatgcctcgcaggag
gaccaggagtggcaggacgaactctcggacaaccagtctgaatattccatcggttctgag
gatgaggatgaggactttgaggagaggccagaggggcagagtggacggcgacaatccagg
aggcagctgaagagcgacagggacaaacctctgcccccgcttcttgctcgagttggcggc
aacatcgaggtgctgggcttcaacgcccggcagcgcaaggccttcctgaattccatcatg
cgctggggcatgccccctcaggatgcgttcaactcccactggctggtgcgggacctccga
gggaagagtgagaaggagtttagagcctacgtgtccctcttcatgcggcacctgtgtgag
ccaggggcggacggcgcggagacctttgcagacggcgtgccccgggagggcctctcgaga
cagcacgtgctcacgcgcatcggggtcatgtcactggttaggaagaaggttcaggagttt
gaacatgtcaatgggaagtacagcaccccagacctgatccctgaggggcctgagggcaag
aagccaggcgaggtcatctcctcggaccccaacacaccagtgcctgccagccccgcccac
atcccaccggccccactgggccttccagaaaaaatggaagcccagctgggctacatggat
gagaaggagccagggatgcagaagccaaagaagcccctggaaatccaggccctgccaact
gccctggacagagtggagggtgaggaaaaacatgagagctcagagagcaaggagagagcc
cgagaggagcggccggaggagacagagaaggcccagtcctccccggagcagctgccaaaa
gaggaagtgcttcccgagaaggagaaaattctggacaagctggagttaagcttgattcac
agcagaggggatagcagtgaattcaggccagatgacaccaaggctgaggagaaggagccc
atcgagactcaacaaaatggtgacaaagaggaggatgaggaggggaagaaggaggacaag
aatgggaaattcaaattcatgttcaacattgcagatgggggctttacagagctgcacaca
ctgtggcagaatgaggagcgtgccgccgtgtcctcgggcaaaatatacgacatctggcac
cggcgccatgactactggttgctagcgggcatcgtgacgcacggctatgcccgctggcag
gacatccagaatgacccgagatacatgatcctcaatgagcccttcaagtccgagattcac
aagggcaattacctggagatgaagaacaagttcctggcccgcaggttcaagctgctggag
caggcactggtcattgaggagcagctgcggagggccgcgtatctcaacatgacccaggac
cccaaccacccagccatggccctcaacgcccgcctggctgaggtggagtgccttgctgag
agccaccagcacctgtccaaggagtcccttgccgggaacaagcctgccaatgctgttctg
cacaaggtcttgaaccaactggaggagctgctgagtgacatgaaggcggatgtgacacgc
ctgccctccatgctgtcccgcatccccccggtggccgcccgcctccagatgtcagaacgc
agcatcctgagccgcctgaccaaccgtgccggtgaccccaccatccagcagggcgctttc
ggctcctcccagatgtacaacaacaacttcgggcccaacttccggggccctggacctgga
gggattgtcaactacaaccagatgcccctggggccctatgtgaccgatatctag
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integrated database retrieval system
