Trichechus manatus latirostris (Florida manatee): 101351488
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Entry
101351488 CDS
T05135
Name
(RefSeq) neurofascin isoform X1
KO
K06757
neurofascin
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
101351488
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101351488
Cell adhesion molecules [BR:
tmu04515
]
Immunoglobulin superfamily
L1 family
101351488
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
fn3
Ig_2
ig
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
Ig_5
V-set_CD47
C2-set_2
Ig_VEGFR-1-like_5th
Pur_ac_phosph_N
BiPBP_C
DUF4998
Motif
Other DBs
NCBI-GeneID:
101351488
NCBI-ProteinID:
XP_004375295
UniProt:
A0A2Y9DJB3
LinkDB
All DBs
Position
Unknown
AA seq
1346 aa
AA seq
DB search
MARQQLPPWVHAAFLLWLLSLGGAIEIPMDPSIQNELSQPPTITKQSVKDHIVDPRDNIL
IECEAKGNPAPSFHWTRNSRFFNIAKDPRVSMRRRSGTLVIDFRSGGRPEEYEGEYQCFA
RNKFGTALSNRIRLQVSKSPLWPKENLDPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSM
EPIAQDKRVSQGHHGDLYFSNVVLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVA
ERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPSHKAKFENFNKA
LRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRA
NGNPKPTVEWMVNGEPLQSAPPNPNREVAGDTIIFRDTQISSRAVYQCNTSNEHGYLLAN
AFVSVLDVPPRMLSPRNQLIRVILYNRTRLDCPFFGSPIPTLRWFKNGQGSNLDGGNYHV
YENGSLEIKMIRKEDQGIYTCVATNILGKAENQVRLEVKDPTRIYQMPEDQVAKKGTTVQ
LPCRVKHDPSLKLTVHWLKDDEPLYVGNRMKKEDDSLTIFGVAERDQGSYTCIASTELDK
DLAKAYLTVLADQATPTNRLAALPKGRPDRPRDLELTDLAERSVRLTWTPGDDNNSPITD
YVVQFEEDQFQPGVWHDHSKFPGSVNSAVLQLSPYVNYQFRVIAVNEVGSSHPSLPSERY
RTSGAPPESNPTDVKGEGTRKNNMEITWTPMNATSAFGPNLRYIVKWRRRETRDTWNNVT
VWGSRYVVGQTPVYVPYEIRVQAENDFGKGPEPETIIGYSGEDYPRAAPTDVKIRVLNST
AISLQWNRVYSDTVQGHLREYRAYYWRESSLLKNLWVSQKRQQASFPGDRLRGVVGRLFP
FSNYKLEMVVVNGRGDGPRSETKEYTTPEGVPSAPRRFRVRQPNLETINLEWDHPEHPNG
ILIGYTLKYVAFNGTKVGKQIAENFSPNQTKFTVQRADPVSRYRFTLSARTQVGNGEAVT
EESPAPPNEATPTAAAPTLPPTTVGVTGTVSSTDATAIAATTEATTVPVIPTVAPTTIAA
TTTVATATTSTAAAATTTESPPPAAGTEILEAAPDEQSIWNVTVLPNSKWANITWKHNFG
PGTDFVVEYIDSNHTKKTVPVKAQAQPIQLTDLYPGMTYTLRVYSRDNEGISSTFITFMT
STAYTNNQADIATQGWFIGLMCAIALLVLILLIVCFIKRSRGGKYPVREKKDVPLGPEDP
KEDDGSFDYSDEDNKPLQGSQTSLDGTIKQQESDDSLVDYGEGGEGQFNEDGSFIGQYTV
KKDKEETEGNESSEATSPVNAIYSLA
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atggccaggcagcagctgccgccgtgggtccatgcagcgttcctcctctggcttctcagc
ctcggcggagccatcgagattcctatggatccaagcattcagaatgagctgtcccagccc
ccgaccatcaccaagcagtcagtgaaggaccatatcgtggacccccgggataacatcttg
attgagtgtgaagcaaaagggaaccctgcccccagcttccactggacacgcaacagcagg
ttctttaacatcgccaaggacccccgggtgtcgatgaggaggcggtctgggaccctggtg
attgacttccgcagcggtgggcgaccagaggaatatgagggggagtaccaatgctttgcc
cgcaacaaatttggcacggccctgtctaataggatccgcctgcaggtgtccaaatctccc
ctgtggcccaaggaaaacctagaccctgttgtggttcaagaaggcgcccccttgacgctg
cagtgcaaccctccacctggacttccatcccccgtcatcttctggatgagcagctccatg
gagcccatcgcccaggacaagcgtgtctcccagggtcatcatggagacctgtacttctct
aatgtggtgctgcaagacatgcagacggactacagctgcaacgcccgcttccacttcacc
cacaccatccagcagaaaaaccccttcaccctcaaggtcctcaccacccgaggagttgca
gagagaacacccagcttcatgtatccccagggcactgcgagcagtcagatggtgcttcgt
ggcatggacctcctactggagtgcatcgcctcgggggtcccaacaccagacatcgcatgg
tacaagaaaggtggggacctcccgtctcacaaggccaagtttgagaactttaacaaggct
ctgcgcatcaccaacgtctccgaggaggactctggggagtatttctgcctggcctccaac
aagatgggcagcatccggcacacgatctcggtgagagtaaaggctgctccctactggctg
gacgaacccaagaacctcatcctggctcctggtgaggacgggagactagtgtgtcgagcc
aatgggaatcccaaacccaccgtcgagtggatggtgaatggggagcctctgcaatcggca
ccgcccaacccaaaccgtgaggtggccggggacaccatcatcttccgcgacacgcagatc
agcagcagggctgtgtaccagtgcaacacctccaacgagcatggctacctgctggccaac
gctttcgtcagtgtgctggatgtgccacctcggatgctgtcgccccggaaccagctcatc
agggtgatcctttataaccggactcggctggactgcccgttctttgggtcccccatcccc
acactccgatggtttaagaatgggcagggaagcaacctggatggtggcaactaccatgtc
tatgagaatggcagtctggaaattaagatgatccgcaaagaggaccaaggcatctacacc
tgtgtcgccaccaacatcctgggcaaagctgaaaaccaagtccgcctggaggtcaaagac
cccaccaggatctaccagatgcctgaggaccaggtggccaagaagggcaccacagtgcag
ctgccatgtcgagtgaagcacgacccctccctgaaactcacagtccactggctgaaggac
gacgagccgctctatgtgggaaacaggatgaagaaagaggacgactccctgacaatcttt
ggtgtagcagagcgggaccagggcagctacacatgcattgccagcaccgagctggacaaa
gacctggccaaggcctacctcaccgtgctagctgatcaggccactccaactaaccgtttg
gctgccctacccaaaggacggccagaccgaccccgggacctggagctcactgacctggct
gagaggagcgtgaggttgacctggaccccgggtgacgataacaacagccccataacagac
tacgttgtccagtttgaagaagaccagttccaaccaggagtctggcatgaccattccaag
tttcccggcagtgtcaactcagctgtcctccagctgtccccatatgtcaactatcagttc
cgggtcattgctgtcaacgaggtcggaagcagccaccccagcctcccctccgagcgctac
cgaaccagtggagcaccccctgagtccaatcccacggatgtgaagggagaggggaccagg
aagaacaacatggagatcacgtggacgcccatgaatgccacctctgcctttggccccaac
ctgcgctacatcgtcaagtggcggcggagagagactcgcgacacctggaacaacgtcaca
gtgtggggctcccgctacgtggtggggcagacccccgtctacgtgccctatgagatccga
gtccaggccgaaaatgactttggaaagggcccggagccagaaaccatcatcggttattcc
ggagaagattatcccagggctgcacccactgatgttaaaatccgcgtcctgaacagcacc
gccatcagccttcagtggaaccgcgtctactccgacacggtccagggccatctcagagag
taccgagcctactactggagggagagcagcttgctgaagaacctctgggtgtctcagaag
aggcagcaagccagcttccctggtgaccgcctccgtggcgtggtgggccgcctctttccc
ttcagtaactacaagctggagatggttgtggtcaacgggagaggcgatgggcctcgcagt
gagactaaggagtataccaccccagaaggagtacccagtgcccccaggcgtttcagagtc
cggcagcccaacctggagacaatcaacctggaatgggatcacccagaacaccccaatggg
atcctgattggatacactctcaaatatgtggcctttaatggaaccaaagtaggaaagcag
atagcagaaaacttctctcccaatcagaccaagttcacagtgcagcgagcagaccccgtg
tcacgttatcgcttcaccctcagtgccaggacgcaggtgggcaatggggaagcggtcacg
gaggagtcaccagcaccgccgaatgaagctactccaaccgcagctgctcccacgctgccc
ccgactactgtgggtgtgacaggcactgtgagcagtactgacgctactgccattgctgcc
accaccgaagccacaacagtccccgtcatccccaccgttgcacctaccaccatcgccgcc
accaccaccgtcgccaccgctactacaagcactgctgccgccgctactaccacggagagc
cccccccctgccgccgggactgagatactcgaagccgcccccgatgagcagtccatatgg
aacgtcacggtgctccccaacagtaaatgggccaacatcacctggaagcacaatttcggg
cccggaactgactttgtggttgagtacatcgacagcaaccatacgaaaaaaactgtccct
gttaaggcccaggcccagcctatacagctgacagacctctatcccgggatgacatacacg
ttgcgggtttattcccgggacaacgagggcatcagcagtaccttcatcacctttatgacc
agtacagcttacaccaacaaccaggcggacatcgccacccagggctggtttattgggctc
atgtgcgccatcgccctgttggtgctgatcctgctcatcgtctgcttcatcaagaggagt
cgaggcgggaagtacccagtgcgagaaaagaaggatgttccccttggccccgaagacccc
aaagaagacgatggctcatttgactacagtgatgaggacaacaagcccctgcagggcagc
cagacgtccctggacggcaccatcaagcagcaggagagtgacgacagcctggtggactat
ggcgagggtggcgagggccagttcaacgaggacggctccttcattggccagtacacagtc
aaaaaggacaaggaggaaacggagggcaacgagagttcagaggccacgtcccctgtcaat
gccatctactctctggcctaa
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