Trichechus manatus latirostris (Florida manatee): 101351661
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Entry
101351661 CDS
T05135
Name
(RefSeq) voltage-dependent N-type calcium channel subunit alpha-1B
KO
K04849
voltage-dependent calcium channel N type alpha-1B
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04010
MAPK signaling pathway
tmu04020
Calcium signaling pathway
tmu04721
Synaptic vesicle cycle
tmu04723
Retrograde endocannabinoid signaling
tmu04725
Cholinergic synapse
tmu04726
Serotonergic synapse
tmu04727
GABAergic synapse
tmu04728
Dopaminergic synapse
tmu04930
Type II diabetes mellitus
tmu05016
Huntington disease
tmu05020
Prion disease
tmu05022
Pathways of neurodegeneration - multiple diseases
tmu05032
Morphine addiction
tmu05033
Nicotine addiction
tmu05207
Chemical carcinogenesis - receptor activation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101351661
04020 Calcium signaling pathway
101351661
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
101351661
04725 Cholinergic synapse
101351661
04728 Dopaminergic synapse
101351661
04726 Serotonergic synapse
101351661
04723 Retrograde endocannabinoid signaling
101351661
04721 Synaptic vesicle cycle
101351661
09160 Human Diseases
09161 Cancer: overview
05207 Chemical carcinogenesis - receptor activation
101351661
09164 Neurodegenerative disease
05016 Huntington disease
101351661
05020 Prion disease
101351661
05022 Pathways of neurodegeneration - multiple diseases
101351661
09165 Substance dependence
05032 Morphine addiction
101351661
05033 Nicotine addiction
101351661
09167 Endocrine and metabolic disease
04930 Type II diabetes mellitus
101351661
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
tmu04040
]
101351661
Ion channels [BR:
tmu04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
101351661
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Ca_chan_IQ
GPHH
PKD_channel
Phage_TAC_15
Motif
Other DBs
NCBI-GeneID:
101351661
NCBI-ProteinID:
XP_004390746
UniProt:
A0A2Y9EBQ3
LinkDB
All DBs
Position
Unknown
AA seq
2202 aa
AA seq
DB search
MGAALIHRRGLRIRSFSAPRRRHASRPVLNPCTPFEYMILATIIANCIVLALEQHLPDGD
KTPMSERLDDTEPYFIGIFCFEAGIKIIALGFVFHKGSYLRNGWNVMDFVVVLTGILTTA
GTDFDLRTLRAVRVLRPLKLVSGIPSLQVVLKSIMKAMVPLLQIGLLLFFAILMFAIIGL
EFYMGKFHKACFPNSTDAEPVGDFPCGKEAPARLCEEDMECREYWPGPNFGITNFDNILF
AVLTVFQCITMEGWTDILYNTNDAAGNTWNWLYFIPLIIIGSFFMLNLVLGVLSGEFAKE
RERVENRRAFLKLRRQQQIERELNGYLEWIFKAEEVMLAEEDKNAEEKSPLDVLKRAATK
KSRNDLIHAEEGEDRFADLGPVGSPFARTSLKSGKNDSSSYFRRKEKMFRFFIRRMVKAQ
SFYWVVLCVVALNTFCVAIVHYKQPQRLTTALYFAEFVFLGLFLTEMSLKMYGLGPRSYF
RSSFNCFDFGVIVGSIFEVVWAAIKPGTSFGISVLRALRLLRIFKVTKYWNSLRNLVVSL
LNSMKSIISLLFLLFLFIVVFALLGMQLFGGQFNFQDETPTTNFDTFPAAILTVFQILTG
EDWNAVMYHGIESQGGVSKGMFSSFYFIVLTLFGNYTLLNVFLAIAVDNLANAQELTKDE
EEMEEAANQKLALQKAKEVAEVSPMSAANISIAARQQNSAKARSVWEQRASQLRLQNLRA
SCEALYSEMDPEERLRFATTRHLRPDMKTHLDRPLVVEPGREGPREGPEPAEPARLPSGL
AAEGPDLPRRHHRHRDKDKTPAPTGAGAEQDRPEAPKAENGEPGGREERPRPHRSRSKEP
TGPRDSRSERPRGPGPEGGGRRHHRRGSPEEATEKEPRRHHAHRHAPDQTREGTGAKGER
RARHRGGPRAAPREAESMEEPARRHRARHKVLSKHDSLEKEAAEKEGENLDKDRDKELRN
HQPKELRCDVEASGLLGVGPMHTLPSTCLQKVVEQPEDADNQRNVTRMDCQPPETSTAML
IPVTLMGTPEETTIVPSENIDLESQTEGKKEADTGGVMGGGPRPVVPYSSMFCLSPTNLL
RRCCHHIVTRQYFEMVILVVIVLSSIALAAEDPVRTDSPRNNVLKYMDYIFTGVFTFEMV
IKMIDLGLLLHPGAYFRDLWNILDFIVVSGALVAFAFSSFMGGSKGKDINTIKSLRVLRV
LRPLKTIKRLPKLKAVFDCVVNSLKNVLNILVVYMLFMFIFAVIAVQLFKGKFFYCTDES
KELERDCRGQYLDYEKEEVEAQPRQWKKYDFHYDNVLWALLTLFTVSTGEGWPMVLKHSV
DATYEEQGPSPGYRMELSIFYVVYFVVFPFFFVNIFVALIIITFQEQGDKVMSECSLEKN
ERACIDFVISAKPLTRYMPQNKQSFQYKTWTFVVSPPFEYFIMAMIALNTAVLMMKFYAA
PYEYELMLKCLNIVFTSMFSMECVLKIIAFGVLNYFRDAWNVFDFVTVLGSITDILVTEI
ANNFINLSFLRLFRAARLIKLLRQGYTIRILLWTFVQSFKALPYVCLLIAMLFFIYAIIG
MQVFGNIALDDDTSINRHNNFRTFLQALMLLFRSATGEAWHEIMLSCLSNRACDEHANAT
ECGSDFAYFYFVSFIFLCSFLMLNLFVAVIMDNFEYLTRDSSILGPHHLDEFIRVWAEYD
PAACGRISYNDMFEMLKHMSPPLGLGKKCPARVAYKRLVRMNMPISSEDMTVHFTSTLMA
LIRTALDIKLAPAGTKQHQCDAELRKEIASVWANLPQKTLDLLVPPHKPDEMTVGKVYAA
LMIFDFYKQNKTTRDQIHQAPGGLSQMGPVSLFHPLKATLEQTQPAVLRGARVFLRQKSS
TSLSNGGAVQTQGGGLKESVSWGTHRTQGLPSEARTPLERGHSAEIPVVQPGEPAVDVQM
QDMALGGPAREPQLGLESQGRAASMPRLAAETQPAPDSSPMKRSISTLAPQRHPGVPVCT
TALDQAPASQVAHHHHHRCHRRRERKQKSLDKGPSLPADPDGGGGGSVNGSPLLSTSGAS
TPGRGGRRQLPQTPLTPRPSITYKTANSSPIHFAGVQTSLPAFSPGRLSRGLSEHNTLLQ
RDPLSQPLAPGSRIGSDPYLGQRLDSEASRPPPEDTLTFEEAVATNSGRSSRTSYVSSMT
SQPHPLRRVPNGYHCTLGLSVGPTPGGRARHSYHHPDQDDWC
NT seq
6609 nt
NT seq
+upstream
nt +downstream
nt
atgggagcggccctcattcacaggagggggctcaggatccggtcgttctcagcccctcgg
aggcggcatgcctcccggccagtccttaacccatgcactccgttcgagtacatgatcctg
gccaccatcatcgctaactgcatcgtgctggccctggagcagcacctccctgacggggac
aagacgcctatgtccgagcgactggacgacacagagccctacttcatcggcatcttttgc
tttgaggcgggcatcaagatcatcgccctgggcttcgtcttccacaagggctcctacctg
cgcaacggctggaacgtcatggactttgtggtggtgctcacagggatcctgaccacggct
ggcaccgacttcgacctgcggactctacgggctgtgcgtgtgttaaggcccctgaagctg
gtgtctgggattccgagtttgcaggtagtgctcaagtccatcatgaaggccatggtcccg
ctcctgcagatcgggctgcttctcttcttcgccatcctcatgtttgccatcattggcctc
gagttctacatgggcaaattccacaaggcctgtttccccaacagcacagatgcagagcct
gtgggagacttcccttgtggcaaggaggccccggcccggttgtgtgaggaggacatggag
tgccgggagtactggccggggcccaactttggcatcaccaactttgacaacatcttgttt
gctgtcctgacagtgttccagtgcatcaccatggagggctggactgacatcctctacaat
accaatgacgcagctggtaacacctggaactggctctacttcattcccctcatcatcatc
ggctccttcttcatgctcaacttggtactgggcgtgctctcaggagaatttgccaaagag
cgtgagagggtggagaaccgccgcgccttcctgaagctccgccgacagcagcagatcgag
cgggagctcaacgggtacctagagtggatcttcaaggccgaggaggtcatgctggctgag
gaggacaagaatgcagaggagaaatccccactggatgtgctgaagcgagcggccaccaag
aagagcaggaacgatctgatccacgctgaggagggcgaggaccgctttgctgacctaggc
cccgttggttccccctttgctcgcaccagcctcaaaagtgggaagaacgacagctcctcc
tatttccggcggaaggagaagatgttccggtttttcatccgccgcatggtgaaggcgcag
agcttctactgggtggtgttgtgcgtggtggctctgaacacgttctgtgtggccatagtg
cattacaaacaaccgcagcggctcaccaccgccctgtattttgcagagtttgttttcctg
ggtctcttcctcacagagatgtccctgaagatgtatggccttgggcccagaagctacttc
cggtcctccttcaactgcttcgactttggggtcattgtggggagcatttttgaagtggtc
tgggcggccatcaagccaggaacctcctttgggatcagtgtgctgcgggcactccggctg
ctgaggatcttcaaggtcaccaagtactggaactccttacgaaacctggtggtgtctctg
ctcaactccatgaagtccatcatcagcctcctcttcctgcttttcctattcatagtggtc
ttcgctctgctggggatgcaactgtttgggggacagttcaacttccaggacgagactccc
acgaccaactttgacaccttccctgctgccatcctcaccgtcttccagatcctgactgga
gaggactggaatgcagtgatgtatcacgggatcgagtcacaaggtggagtcagcaaaggc
atgttctcatccttttacttcattgtcctgacgttgtttggaaattacaccctgctcaac
gtcttcctggctatcgcggtggacaacctcgccaatgctcaggagctgaccaaggatgaa
gaggagatggaagaagcagccaatcagaaacttgctctgcaaaaggccaaagaagtggct
gaagtcagccccatgtctgccgcaaacatctccattgcagcgaggcagcagaactcagcc
aaggcccggtcagtgtgggagcagcgggccagccagctgcggctgcagaacctgcgggcc
agctgtgaggccctgtacagtgagatggaccccgaggagcgactgcgatttgccacgacg
cgccacctgcgacctgacatgaagacccacctggaccggcccctggtggtggagcctggc
cgtgagggcccacgggagggccctgagcccgctgagcctgcccgcctgccatcaggcctg
gctgccgagggccctgatctgccccgacggcaccaccgccaccgagacaaggacaagacc
ccagcccccactggggcaggtgctgagcaggacagacctgaggcccccaaggctgagaac
ggggagccagggggccgggaggagcgaccccggccacaccgcagccgcagcaaggagccc
acgggccccagggacagccggagcgagcggccccgaggcccagggcccgagggtggcggc
cggcgccatcatcggcgaggctccccggaggaggcaactgagaaggagccccggcgtcac
cacgcccaccgacatgctccggaccagacccgggagggcaccggagccaagggtgagcgg
cgggcgcggcaccgtggaggcccccgggctgcccccagggaggctgagagcatggaggaa
ccagctcggcggcatagggcccggcacaaggtgctgtccaagcacgactctctggagaag
gaggctgcagagaaggagggtgagaacctggacaaggacagggacaaggagctcaggaac
caccagcccaaggagctgcgctgtgatgtggaggccagtgggctgctgggagtgggtcct
atgcacacgctgcccagcacctgtctccagaaggtggtggaacaaccagaggatgcagac
aaccagcggaacgtcacgcggatggactgtcagcccccggagacaagcactgccatgctc
atcccagtgacattgatgggcaccccggaggagaccaccatcgtgcccagtgaaaacata
gacctggagagccaaacggaggggaagaaggaggcagacaccggtggtgtgatggggggc
ggcccccgtcctgtcgtcccctacagctccatgttctgtctgagtcccaccaacctgctc
cgccgctgctgccatcacatcgtgaccaggcagtacttcgagatggtcattcttgtggtc
attgtcctgagcagcattgccctggctgctgaggaccctgtgcgcacagactcacccagg
aacaacgttctaaaatacatggattacatcttcacaggcgtcttcacctttgagatggtg
ataaagatgattgacctgggactgctgctgcaccctggggcctacttccgggacctgtgg
aacatcctggacttcattgtggtcagtggtgccctggtggcatttgccttctcgagcttc
atgggaggatccaaagggaaagacatcaacaccatcaagtccctgagagtcctgcgcgtc
ttacggccactcaagaccatcaaacggctgcctaagctcaaggccgtgtttgactgtgtg
gtgaactccttgaagaacgtcctcaacatcctggtcgtctacatgctcttcatgttcatc
tttgctgtgatcgccgtgcagctcttcaaagggaagtttttctattgcaccgatgagtcc
aaggagctggagagggactgcaggggtcagtatttggattatgaaaaggaggaggtggaa
gctcaaccacggcagtggaagaaatatgactttcactatgacaacgtgctctgggctctg
ctgacactgttcactgtgtctacgggagaagggtggcccatggtactgaaacactccgtg
gatgccacctacgaggagcagggcccgagccctgggtaccgcatggagctgtccattttt
tatgtggtctacttcgtggtctttcccttcttcttcgtaaacatcttcgtggccttgatc
atcatcaccttccaggagcagggggacaaggtgatgtctgagtgcagcctggagaagaat
gagagggcctgcatcgacttcgtcataagtgccaagcccctgacacggtacatgcctcaa
aacaagcagtcattccagtacaagacgtggacgttcgtggtgtccccacccttcgagtac
ttcatcatggccatgatcgccctcaacaccgctgtgctgatgatgaagttttacgccgcg
ccctacgagtacgagctgatgctgaagtgtctgaacatagtgttcacgtccatgttctcc
atggagtgcgtgctgaagatcatcgcctttggggtgttgaactatttcagagatgcctgg
aacgtctttgactttgtcacagtgttgggaagtattactgatattttagtaacagagatt
gcgaacaacttcatcaacctcagcttcctccgcctattccgtgccgcccgcctcatcaag
ctgctccgtcaggggtacaccatccgcatcctgctatggaccttcgtccagtccttcaag
gccctgccctatgtgtgtctgctcatcgccatgctcttcttcatctacgccatcatcggc
atgcaggtgtttggaaacattgccctagatgatgacacgagcatcaacaggcacaataac
ttccgaacctttctgcaagccttgatgctactgttcaggagtgccacaggtgaggcctgg
cacgagatcatgctgtcttgtctaagcaaccgtgcctgtgatgagcatgccaatgccact
gagtgtgggagcgactttgcctacttttacttcgtctccttcatctttctttgttccttt
ctgatgttgaacctctttgtggctgtgatcatggacaattttgagtaccttacgcgggac
tcttccatcctagggccccaccacctggacgagttcatccgggtctgggctgagtacgac
ccagccgcttgtgggcgcatcagttacaatgacatgtttgagatgctgaagcacatgtcc
ccacctctgggcctggggaagaaatgccccgctcgcgttgcctataagcgcctggtacgc
atgaacatgcccatctccagtgaggacatgacagtccacttcacatctactctgatggcc
ctcatccggactgcgctagacatcaagctggctccagctgggacaaaacagcaccagtgt
gatgcagagctgaggaaggagattgcctctgtgtgggccaacctgccccagaaaactctg
gacctgttggtgccaccccataaacctgatgagatgacagtggggaaagtctatgcagct
ctgatgatctttgacttctacaaacagaacaaaaccaccagagaccagattcatcaagct
cctggaggcctgtcccagatgggccccgtgtccctgttccaccctctgaaagccaccctg
gagcagacacagccagctgtgctccgaggagccagagttttccttcggcagaagagctcc
acttccctcagcaacggaggggctgtacagacacaagggggtggcctcaaggagtcggtc
tcctggggcactcatcggacccaggggctgccctccgaggcacggacacccctggagcgg
ggccattctgcggagattcctgtggtgcagccaggagaaccggctgtggatgtacagatg
caggacatggccctgggtggccctgccagggagcctcagctcgggctggagagtcagggc
cgagcagcctccatgccccgccttgcagctgagacacagcccgccccagactccagcccc
atgaagcgctccatctccaccctggccccccagcgccatcctggggtcccggtctgcacc
accgccctggaccaagccccagccagccaggttgcacaccatcaccaccaccgctgccac
cgccgccgggagaggaagcagaagtctctggacaaggggcccagcctgccagcggacccg
gatggtggtggtggtggttcagttaatgggagccccttgctgtcaacatctggtgctagc
accccaggccgaggtgggcggaggcaactcccccagacccccctgaccccccgacccagc
atcacctacaagactgccaactcctcacccattcacttcgccggggtccagaccagcctc
cctgccttctcccctggccggctcagccgaggcctctccgagcacaacacactgctccag
agagaccctctcagccagcccctggcacctggctctcggatcggctccgacccgtacctg
gggcagcgtctggacagtgaggcctcccggcccccaccagaagacacgctcacctttgag
gaggctgtggccaccaactcaggccgctcctccaggacttcctacgtgtcctcgatgacc
tcccagccacatcccctccgccgtgtgcccaacggctaccactgcacgctggggctcagc
gtgggccccacgcctggtggccgggcacggcacagctaccaccaccccgaccaagatgac
tggtgctag
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integrated database retrieval system
