Trichechus manatus latirostris (Florida manatee): 101351668
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Entry
101351668 CDS
T05135
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03040
Spliceosome
tmu05202
Transcriptional misregulation in cancer
tmu05205
Proteoglycans in cancer
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101351668
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
101351668
05205 Proteoglycans in cancer
101351668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tmu03041
]
101351668
03009 Ribosome biogenesis [BR:
tmu03009
]
101351668
Enzymes [BR:
tmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
101351668
Spliceosome [BR:
tmu03041
]
Complex A
U1 snRNP components
U1 related factors
101351668
Complex B
101351668
Ribosome biogenesis [BR:
tmu03009
]
Eukaryotic type
Pre-60S particles
Helicases
101351668
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
P68HR
ResIII
Helicase_C_2
ERCC3_RAD25_C
Cas3-like_C_2
BNIP2
Motif
Other DBs
NCBI-GeneID:
101351668
NCBI-ProteinID:
XP_004374268
UniProt:
A0A2Y9DGK6
LinkDB
All DBs
Position
Unknown
AA seq
616 aa
AA seq
DB search
MSGYSSDRDRGRDRGFGAPRFGGSRAGPLSGKKFGNPGEKLVKKKWNLDELPKFEKNFYQ
EHPDLARRTAQDVETYRRSKEITVRGHNCPKPVLNFYEANFPANVMDVIARQNFTEPTAI
QAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHINHQPFLERGDGPICLVLAPTRELA
QQVQQVAAEYCRACRLKSTCIYGGAPKGPQIRDLERGVEICIATPGRLIDFLECGKTNLR
RTTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHI
NIGALELSANHNILQIVDVCHDVEKDEKLIRLMEEIMSEKENKTIVFVETKRRCDELTRK
MRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVASRGLDVEDVKFVINYDYPN
SSEDYIHRIGRTARSTKTGTAYTFFTPNNIKQVSDLISVLREANQAINPKLLQLVEDRGS
GRSRGRGGMKDDRRDRYSAGKRGGFNTFRDRENYDRGYSSLLKRDFGAKTQNGVYSAAAN
YTNGSFGSNFVSAGIQTSFRTGNPTGTYQNGYDSTQQYGTNVPNIHNGMNQQAAYAYPAT
AAAPMIGYPMPTGYSQ
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggttattcgagtgaccgagaccgcggccgggatcgaggatttggggcacctcgg
tttggaggaagcagggcagggcccctgtctggaaagaagtttggaaatcctggggagaaa
ctagttaaaaagaagtggaatcttgatgagctgcccaaatttgagaagaatttttaccaa
gaacaccctgatttggctaggcgcacagcgcaagatgtggagacatacaggagaagcaag
gaaatcacagttagaggtcacaactgcccgaagccagttttgaatttttatgaagcaaac
tttcctgcaaatgtcatggatgtgattgcaagacagaactttactgaacctactgctatt
caagctcagggatggccagttgctttaagtggattggatatggttggagtagcacagact
ggatctgggaaaacgttgtcttacttgctgcctgccattgtccacatcaatcatcagcca
ttcttagagagaggtgatgggcctatttgcttggtgctggcgccaactcgggaactggcc
caacaggtgcagcaggtagctgctgaatattgtagagcctgtcgtttgaagtctacttgc
atctatggtggagctcccaaaggaccgcaaatacgtgatttggagagaggtgtggaaatc
tgtatcgcaacacctggaagactaatagattttttagagtgtgggaaaaccaacctgaga
agaacaacctaccttgtccttgatgaagcagatagaatgcttgatatgggctttgaaccc
caaataaggaaaattgtggatcagataagacctgataggcaaactctgatgtggagtgca
acttggccaaaagaagtaagacagcttgctgaagacttcctgaaagattacattcatata
aacattggtgcactagaactgagtgcaaaccacaacattcttcagattgtggatgtgtgt
catgatgtggagaaggatgaaaaacttattcgcctaatggaagagatcatgagtgagaag
gagaataaaaccattgtttttgttgaaaccaaaagaaggtgtgatgaacttaccagaaaa
atgaggagagatgggtggcctgccatgggtatccatggtgacaagagtcaacaggagcga
gactgggttctaaatgaattcaaacatggaaaagctcctattctgattgctacagatgtg
gcctccagagggctagatgtggaagatgtgaaatttgtcatcaattatgactaccctaac
tcctcagaggattatattcatcgaattggaagaactgctcgcagtaccaaaacaggcaca
gcatacactttctttacacctaataacataaagcaagtgagcgaccttatttctgtgctt
cgtgaagctaatcaagcaattaatcccaagttgcttcagttggtcgaagacagaggttca
ggtcgttccaggggtagaggaggcatgaaggatgaccgccgggacagatactctgcaggc
aaaaggggtggattcaatacctttagagatagggaaaattacgatagaggttactctagt
ctgcttaagagagattttggggcaaaaactcagaatggtgtttacagtgctgctgcaaat
tataccaatgggagctttggaagtaattttgtgtctgctggtatacagaccagttttagg
actggtaatccaacagggacttaccagaacggttatgatagcactcagcaatatggaact
aatgttccaaatatacacaatggtatgaaccaacaggcagcatatgcatatcctgctact
gcagctgcacctatgattggttatccaatgccaacaggatattctcaataa
DBGET
integrated database retrieval system
