Trichechus manatus latirostris (Florida manatee): 101351693
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Entry
101351693 CDS
T05135
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1 isoform X2
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04120
Ubiquitin mediated proteolysis
tmu04137
Mitophagy - animal
tmu04144
Endocytosis
tmu04340
Hedgehog signaling pathway
tmu04350
TGF-beta signaling pathway
tmu04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
101351693
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
101351693
04350 TGF-beta signaling pathway
101351693
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
101351693
04137 Mitophagy - animal
101351693
09144 Cellular community - eukaryotes
04520 Adherens junction
101351693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101351693
04121 Ubiquitin system [BR:
tmu04121
]
101351693
03029 Mitochondrial biogenesis [BR:
tmu03029
]
101351693
Enzymes [BR:
tmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
101351693
Membrane trafficking [BR:
tmu04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
101351693
Autophagy
Mitophagy
Other mitophagy associated proteins
101351693
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
HECT type E3
101351693
Mitochondrial biogenesis [BR:
tmu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101351693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
101351693
NCBI-ProteinID:
XP_004380863
UniProt:
A0A2Y9DTG3
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDP
KWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCK
LNPSDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPA
PYTDGTGAAAGGGNCRFAESPSHDQRLQVQRLRNPEVRGSLQTPQNRPHGHQSPELPEGY
EQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVD
HNNRTTQFTDPRLHHIMNHQCQLKEPSQPLPLPSEGSVEDEELPAQRYERDLVQKLKVLR
HELSLQQPQAGHCRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVARE
WLYLLCHEMLNPYYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYI
NGGFTVPFYKQLLGKAIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRIL
QHELKPNGRNVPVTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQK
ELELIIGGLDKIDLNDWKSNTRLKHCVADSNIVRWFWQAVEAFDEERRARLLQFVTGSTR
VPLQGFKALQGAAGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVE
ETCGFAVE
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaccccgggacgcgcaggaatggctccagcatcaagatccgtctgacagtattg
tgtgccaagaatcttgcaaagaaagacttcttcagacttcccgacccttttgcaaagatt
gtcgttgatgggtctgggcagtgccactcaactgacactgtgaaaaacactttggaccca
aagtggaaccagcactatgatctatatgttgggaaaacggattctataactatcagcgtg
tggaaccacaagaagattcacaagaagcagggagctggcttcctcggctgcgtgcgactg
ctgtccaatgccattagcagattaaaagatactggataccagcgtttggatctatgcaaa
ctaaatccctcagatactgatgcagttcgtggccagatagtggtcagtttacagacgcga
gacagaatcggcacaggagggtctgtggtggactgcagaggactgttagaaaatgaagga
acggtgtatgaagactctgggcctgggaggccacttagttgcttcatggaggagccggcc
ccttacacagatggcacgggtgctgctgccgggggaggcaactgccggtttgcggagtcc
ccaagtcacgatcagaggcttcaagtgcagcgacttcggaatcccgaggtgcgagggtcc
ctgcagacaccgcagaaccgcccgcacggccaccagtcacccgagctgcccgagggctat
gagcaaagaaccacagtccaggggcaagtttactttttgcacacacagacgggcgtgagc
acctggcacgaccccaggatacccagagaccttaacagtgtgaactgtgatgaacttgga
ccactgccacccggttgggaagtcagaagtaccgtttctgggaggatatattttgtagat
cataataaccgaacaacacagtttacagacccaaggttacaccacatcatgaatcaccag
tgccaactgaaggagccaagccagccactgccactgcccagtgaaggctctgtggaggac
gaggagctgcctgcccagagatacgagagggatctagtccagaaactcaaagtcctcaga
catgaactttcactgcagcaaccccaagctggccattgccgcattgaagtctcccgagaa
gaaatatttgaggagtcttaccgccagataatgaagatgcggccaaaggacttgaagaaa
cgactgatggtgaaattccgaggagaagaaggtttggattacggcggagtggcgagggag
tggctttatttattgtgccatgaaatgttgaatccatattatggactcttccagtattct
accgacaacatttacatgttgcagatcaatccagattcttcaatcaaccctgaccatttg
tcttatttccactttgtgggtcggatcatgggtctggctgtgttccatggacactacatc
aatgggggcttcacggtccccttctataagcagctactgggaaaagccatccagctttca
gatttggagtcggtggacccagagctccataagagcttagtgtggattctggagaacgat
atcacccctgtgctggaccacaccttctgcgtggagcacaacgccttcgggcggattctc
cagcatgaactgaaacccaatggcaggaatgtccctgtcacagaggagaacaaaaaagaa
tatgtccggttgtatgtaaattggaggtttatgagaggaattgaagcccagttcttagct
ctccagaaggggttcaatgaactcatccctcaacacttactgaagccttttgaccagaag
gaactagagttgataattggtggcttggataagatagacttgaacgactggaagtcgaac
acgcgtctgaagcactgtgtggctgacagcaacatcgtccggtggttctggcaggccgtg
gaggccttcgacgaggagaggagggcccggctcctgcagtttgtgactggctcgacacgg
gtgcctctccagggcttcaaggcactgcaaggcgcggcagggccccggctgttcaccatc
cacctgatagacgccaacacggacaaccttccaaaggctcacacctgctttaaccggatc
gacattccaccgtacgagtcgtatgagaagctgtacgagaagctgctgacggctgtggag
gagacctgcgggttcgccgtggagtga
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integrated database retrieval system
