Trichechus manatus latirostris (Florida manatee): 101351891
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Entry
101351891 CDS
T05135
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04140
Autophagy - animal
tmu04211
Longevity regulating pathway
tmu05010
Alzheimer disease
tmu05014
Amyotrophic lateral sclerosis
tmu05016
Huntington disease
tmu05017
Spinocerebellar ataxia
tmu05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
101351891
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
101351891
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
101351891
05014 Amyotrophic lateral sclerosis
101351891
05016 Huntington disease
101351891
05017 Spinocerebellar ataxia
101351891
05022 Pathways of neurodegeneration - multiple diseases
101351891
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tmu01009
]
101351891
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tmu04131
]
101351891
03029 Mitochondrial biogenesis [BR:
tmu03029
]
101351891
Protein phosphatases and associated proteins [BR:
tmu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
101351891
Membrane trafficking [BR:
tmu04131
]
Autophagy
Autophagosome formation proteins
ULK complex
101351891
Mitochondrial biogenesis [BR:
tmu03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
101351891
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ubiquitin
Motif
Other DBs
NCBI-GeneID:
101351891
NCBI-ProteinID:
XP_004386643
UniProt:
A0A2Y9E5M4
LinkDB
All DBs
Position
Unknown
AA seq
1592 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAVQHQVLVVNGGECMAADRRVC
TYSAGTDTNPIFLFNKEMILCDRPPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLFKFESIYSNYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLPEHEGSEKAEMKRSTEL
VLSSDMPRTTNKSLLTSFHKSVENVVPDPTDAESGKEIRESCHSTVQHDETPIDAKDDDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPRIIRPFLAECRQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCSRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVKIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKREFFGKL
FRKSFLRNRLFRGLDSWPPSFCTQKPRRFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLSEQKTSASQASPQSASSPRIESTTG
ITTATSPRTPSPLTVQDPLCPAVCPLEELSPDSIDAHTFDFETIPHPNIEQTLEQGSLDL
DSLAESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRMQGTN
ICGKEDSGDHASNVQLEKCRVVAQDSHFSIQTIKEDLCHFRTFVQKEQCDFSNSLKCTAV
EIRNIIEKVKCSLEITLQEKYQRELQTLKNEYEAKLDALIKESEENENKIKKLKGDLVCL
EEVLQNKDNEFALVKHEKEVVICLQNEKDQKLLEMENIMRTQNCEIKELKESQEIVLGDL
KKLHVENDEKMQLLRAELQYLEQSHLKELEDTLQVRHTQEFEKVMTEHRVSLEKLKEENQ
HRIDQIQESHATVVQEKDQQLQELKLKVSDLSDMRCKLEVELALKEAETDEIKLLLEESK
AQQKETLKSLLEQETENLRTEISKLNQKIQDNNENYQVGLAELKTLMTIEKDQCISELIS
RHEEESNMLKAELNEVTSLHQQAFEIETKLKDQIVELQNKLESELSTLEKQKDEKMIQQE
DRYEAIIHKLEKDKEKLVMSQDQDREQLIQKLNSEKEEAIKTALNEFKLGRDAAEKELLE
KVRHLETQLAKSPATESAREESSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRT
SLIAEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEK
KKLEEEVSKLRSSSFLPSPYVAAAPELYGACAPELPGETERSAMETAEEGRLDSAMETSM
MSVQENIHMLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSPRHSEKIAIRDFQ
VGDLVLIILDERHDNYVLFTVSPTLYFLHSESLPGLDLKPGEGASGASRRPWVLGKVMEK
EYCQAKKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4779 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtatttctggtcaatactggaactaccctaacatttgacactgagctt
acagttcaaactgtggcagaccttaagcatgccattcaaagtaaatacaagattgctgtt
cagcaccaggtgctggtggtcaatggaggagaatgcatggctgcagatcgaagagtgtgt
acctacagcgccgggacggacacaaatccaatttttctttttaataaagaaatgatctta
tgtgatcgtccaccggctattcctaaaactaccttttcaactgaaaatgacatggaaata
aaagttgaagagtctcttatgatgcctgcagtttttcacactgtagcttcaaggacacaa
cttgcagtggagatgtatgaagttgccaagaaactttgctctttctgtgaaggtctggtt
catgatgaacatcttcaacaccaaggctgggctgctatcatggccaatttggaggactgt
tcaaattcataccaaaagctccttttcaagtttgaaagtatttattcaaattatctgcag
tccatagaagacatcaagttaaaacttactcatttaggaacagcggtttcagtaatggcc
aagattccactgttggagtgcctaaccagacatagttacagggaatgtttgggaagactg
gattctttacctgaacatgaaggctcagaaaaggctgagatgaaaagatccactgaactg
gtgctctcttctgatatgcctagaacaactaacaaatcgttattaacctcatttcacaag
tcagtggaaaatgtagtaccagatcctacagatgctgaaagtggcaaagaaattagggaa
tcttgtcatagtactgtccagcatgatgaaactccaatagatgctaaagacgatgatctg
ccttttttcaatgtttctttattagactggataaatgttcaagatagacctaatgatgtg
gaatctttggtcaggaagtgctttgattctatgagcagacttgatccaaggattattcga
ccatttctagcagaatgccgtcaaactattgccaaacttgataatcagaatatgaaagct
attaaaggacttgaagataggctttatgccctggaccagatgattgctagctgcagcaga
ctggtgaatgaacaaaaagaacttgctcagggatttttagctaatcagatgagagctgaa
aacttgaaagatgcatctgtattgcctgatttgtgcctgagtcatgcaaatcagttaatg
attatgttgcaaaaccatagaaaactgttggatattaaacagaagtgtaccactgccaaa
caagaactagcaaataacctgcatgtcagattgaagtggtgttgctttgtaatgcttcat
gccgatcaagatggagagaaattgcaagctttgcttcgccttgtaatagagctgttagaa
agagtcaagattgttgaagctcttagtacagttcctcagatgtactgcttagctgttgtt
gaggttgtcaggagaaaaatgttcataaaacactacagggagtgggctggtgctttagtg
aaagatggaaagcaattatatgaagctgaaaaatcaaaaagggaattctttgggaaatta
ttcaggaagtctttcttaagaaatcgtctgtttaggggactggactcctggcccccttcc
ttttgtactcaaaagcctcgaaggtttgactgtgaacttccagatatttcattaaaagat
ttacaatttctgcaatcattttgtccttcagaagttcagccattcctcagggttccctta
ctttgtgactttgaacctctacaccagcatgttcttgctctgcataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatcttctgagtgaacaaaagacc
tctgcaagtcaggcatccccacagtctgcttcttcaccaaggatagaaagtacaacagga
ataacaactgctacctcaccaagaactccttctccactcactgttcaggatcccttatgt
cctgcagtttgtcccttagaagaattatctccagatagcattgatgcacatacctttgat
tttgaaactatcccccatccaaacatagaacaaactcttgaacaaggttctttagacttg
gattcattagcagaaagtcctgaatcagattttatgtctgccgtgaatgagtttgtaata
gaagaaaatttatcatctcctaatcctataagtgatccacaaagcccagaaatgatggtg
gaatcactttattcttcagttatcaatgcaatagatagcagacgtatgcagggtacaaat
atttgtggtaaagaggattcaggagatcatgcttccaatgtccagttggaaaaatgtagg
gtggttgcccaagactctcacttcagtatacaaaccatcaaggaagacctttgccacttc
agaacatttgttcaaaaagagcagtgtgacttctcaaattctttaaaatgtacagcagta
gaaataagaaacattattgaaaaagtaaagtgttctctggaaataacactacaagaaaag
tatcaaagagaactacagactttaaaaaatgaatatgaagctaaacttgatgcactaata
aaggagagtgaagaaaatgaaaacaaaattaaaaagttgaaaggagacctagtatgtctt
gaggaggttttgcaaaataaagataatgaatttgctttggttaagcatgaaaaagaagtt
gtcatctgcctacagaatgaaaaggatcagaaactgttagagatggaaaatataatgcgc
actcaaaattgtgaaattaaagaactgaaagagtcccaagaaatagtgctaggagactta
aaaaagctccatgttgaaaatgatgagaagatgcagttattgagagcagaacttcagtat
ttagagcaaagtcatcttaaggaattagaggacactctgcaagtcaggcatacgcaggag
tttgagaaagttatgacagagcacagagtttctttggagaaattaaaagaggaaaatcaa
cacagaattgatcagatacaagagtctcatgcaacagttgtccaagaaaaagatcaacag
ctacaggaattaaaactcaaggtttctgatttgtctgacatgagatgcaagctagaggtt
gaacttgcattgaaggaagctgaaactgacgaaataaaacttttgctggaagaaagcaaa
gcccaacagaaggagaccttaaaatctctccttgaacaagagacagaaaatttgagaaca
gagataagtaagttaaaccaaaagattcaggataataatgaaaattaccaggtaggctta
gcagagctaaaaactttaatgacaattgaaaaagatcagtgtatttcagagttaattagt
agacatgaagaggaatcaaatatgcttaaagctgagttaaatgaagtaacatctttgcat
cagcaagcatttgaaatagaaacaaaactgaaggatcaaatagttgaactacaaaataaa
ttggagtcagaattgagtactcttgagaaacaaaaagatgaaaaaatgattcaacaagaa
gacagatatgaagctattatccataaacttgaaaaggacaaagaaaaattggtcatgagc
caggaccaagacagagaacagttaattcagaaacttaattctgaaaaagaagaagccatt
aagactgctctcaatgaatttaaactggggagagatgctgctgaaaaagagttactagaa
aaagttcgacatcttgagactcagttagcaaaaagtcctgccactgaatctgccagagaa
gagtcttcaagtttagttgctgaacttcaagaaaagcttcaggaagaaaaagccaagttt
ctagaacaacttgaagagcaagaaaagagaaagaatgaagaaatgcaaaatgttcgaaca
tctttgattgctgaacaacagaccaattttaacactgttttaacaagagagaaaatgaga
aaagaaaacattataaatgatctaagtgataagttgaaaagtacaatgcagcaacaagag
cgagataaagatttgatagagtcactctctgaagatcgagctcgtttgcttgaggagaag
aaaaaacttgaagaagaagtcagtaagttgcgtagtagcagctttcttccttcaccttac
gtagctgcagccccagaactttatggagcttgcgcacctgaactccctggtgaaacagag
agatcagccatggaaacagcagaggaagggagattggattcagcaatggagacaagcatg
atgtctgtacaagaaaatatccatatgttgtctgaagaaaaacagaggataatgctgtta
gaacggacattgcagttgaaagaagaagaaaataagcggttaaatcaaagactcatgtct
caaagcatgtcttcagtatctccaaggcattctgaaaaaatagctattcgagattttcag
gtgggagatttggtactcatcatcctagatgaacgccatgacaattatgtattatttact
gttagtcctaccttatactttctgcattcagagtctctgcctggcctggatctcaaacca
ggtgagggtgcttcaggtgcatctagaagaccctgggtacttggaaaagtaatggaaaag
gaatactgtcaagccaagaaggcacaaaaccgatttaaagttcctttggggacaaagttt
tatagagtgaaagcagtgtcctggaataagaaagtataa
DBGET
integrated database retrieval system
