Trichechus manatus latirostris (Florida manatee): 101352151
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Entry
101352151 CDS
T05135
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X2
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101352151
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101352151
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101352151
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101352151
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
101352151
NCBI-ProteinID:
XP_004386497
UniProt:
A0A2Y9E3Z1
LinkDB
All DBs
Position
Unknown
AA seq
540 aa
AA seq
DB search
MVRTDGHTLSEKRNYQVTNSMFGASRKKFVEGVDSDYHDENMYYSQSSMFPHRSEKDMLA
SPSTSGQLSQFGASLYGQQSALGLPMRGMSNNTPQLNRSLSQGTQLPSHVTPTTGVPTMS
LHTPPSPSRGILPMNPRNMMNHSQVGQGIGIPSRTNSMSSSGLGSPSRSSPSIICMPKQQ
PSRQPFTVNSMSGFGMNRNQAFGMNNSLSSNIFNGTDGSENVTGLDLSDFPALADRNRRE
GSGNPTPLINPLAGRAPYVGMVTKPANEQSQDFSIHNEDFPALPGSSYKDPTSSNDDSKS
SLNTSGKTTSSTDGPKFPGDKSSTTQNNNQQKKGIQVLPDGRVTNIPQGMVTDQFGMIGL
LTFIRAAETDPGMVHLALGSDLTTLGLNLNSPENLYPKFASPWASSPCRPQDIDFHVPSE
YLTNIHIRDKLAAIKLGRYGEDLLFYLYYMNGGDVLQLLAAVELFNRDWRYHKEERVWIT
RAPGMEPTMKTNTYERGTYYFFDCLNWRKVAKEFHLEYDKLEERPHLPSTFNYNPAQQAF
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggactgatggacatacattatctgagaaaagaaactaccaggtgacaaacagc
atgtttggtgcttcaagaaagaagtttgtagagggggtcgacagtgactaccatgatgaa
aacatgtactacagccaatcttctatgtttccacatcggtcagaaaaagatatgctggca
tcaccatctacatcaggtcagctgtctcagtttggggcaagtttatacgggcaacaaagt
gcactaggccttccaatgagggggatgagcaacaatacccctcagttaaatcgcagctta
tcacaaggcactcagttaccgagccacgtcacgccaacaacaggggtaccaacaatgtca
cttcacacgcctccatctccaagcaggggtattttgcctatgaatcctaggaatatgatg
aaccactcccaggttggtcagggcattggaattcctagcaggacaaatagcatgagcagt
tcagggttaggtagccccagcagaagctcgccaagcataatatgtatgccaaagcagcag
ccttctcgacagccttttactgtgaacagtatgtctggatttggaatgaacaggaatcag
gcatttggaatgaataactccttatcaagtaacatttttaatggaacagatggaagtgaa
aatgtgacaggattggacctttcagattttccagcattagcagaccgaaacagaagggaa
ggaagtggtaacccaactccattaataaatcccttggctggaagagctccttatgttgga
atggtaacaaagccagcaaatgagcaatcccaggatttctcaatacacaacgaagatttt
ccagcattacctggttccagctataaagatccaacgtcaagtaatgatgacagtaaatct
agtttgaatacatctggcaagacaacttcaagtacagatggacccaaattccctggagat
aaaagttcaacaacacaaaataataaccagcagaaaaaagggatccaggtgttacctgat
ggccgggttactaacattcctcaagggatggtgacggaccaatttggaatgattggcctc
ttaacatttatcagggcagcagagacagacccaggaatggtacaccttgcattaggaagt
gacttaacaacattaggcctcaatctgaactctcctgaaaatctctatcccaaatttgca
tcaccctgggcatcttcaccttgtcgacctcaagacatagacttccatgttccatctgag
tacttaacgaacattcacattagggataagctggctgcaataaaacttggtcgatatgga
gaagatcttctcttctatctttattacatgaatggaggagacgtattacaacttttagct
gcagtagagctctttaaccgtgattggagataccacaaagaagaacgagtatggattacc
agggcaccaggcatggagccaacaatgaaaactaatacatacgagaggggaacatattac
ttctttgactgtcttaactggaggaaagtagctaaggagttccatctggaatatgacaaa
ttagaagaacggcctcacctgccatccaccttcaactacaaccctgctcagcaagccttc
taa
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