Trichechus manatus latirostris (Florida manatee): 101352200
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Entry
101352200 CDS
T05135
Name
(RefSeq) general transcription factor IIF subunit 1 isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
101352200
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101352200
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
101352200
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
101352200
NCBI-ProteinID:
XP_004378473
UniProt:
A0A2Y9DPE4
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MAALGPSSQNVTEYVVRVPKNTTKRYNIMAFNAADKVSFATWTQARLERDLSNKKIYQDE
ELPESGAGSEFNRRLREEARRKKYGIVLKEFRPEDQPWLLRVNGKAGRKFKGVKKGGVTE
NASYYIFTQCPDGAFEAFPVHNWYNFTPLARHRTLTAEEAEEEWERRNKVLNHFSIMQQR
RLKDQDQDDEEEEKEKRGRKKASELRIHDLEDDLEMSSDDSEASGEEGGRAPKAKNKAPA
GKAGRRKKKKGPDDEALEDSDDGDFEGQEVDYMSDGSSSSQDEMESKPTVTKQEEGPKGV
DEQSESSEESEEEKPPEEDKEEEEEKAAPTPQEKQRRKDSSDESDSSEESDIDSEASSAL
FMAKKKTPPKRERKPSGGSSRGNSRPGTPSAEGSTSCTLRAAASKLEQGKRTSDMPTAKR
LRMDAGPQGLSGKSTPQPQSGKSTPSSGDVQVTEDAVRRYLTRKPMTTKDLLKKFQTKKT
GLSSEQTVNVLAQILKRLNPERKMINDKMHFSLKE
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggccctaggccccagcagccagaatgtcactgagtatgttgtccgagttcccaaa
aacacaacgaagagatacaacatcatggcctttaacgcagccgataaagtcagcttcgct
acttggactcaggcgcggctggagcgggacctgagcaacaagaagatttaccaggacgag
gagctgcccgagtccggcgcgggcagcgagttcaaccgcaggctccgggaggaggcgcgc
aggaagaagtacggcatcgtcctcaaggagttccgcccagaggaccagccctggctgctc
cgtgtcaacggcaaggcgggccggaagttcaagggcgtgaagaaggggggcgtgacggag
aacgcgtcctactacatcttcacccagtgccccgacggcgccttcgaggccttcccggtg
cacaactggtacaacttcacgccgctggcccggcaccgcacgctcacggccgaggaggcc
gaggaggagtgggagaggaggaacaaggtcctgaaccacttcagcatcatgcagcagcgg
cggctcaaggaccaggaccaggacgacgaggaggaggagaaggagaagcgtggccgcaag
aaggccagcgagctgcgcatccacgacctggaggacgacctggagatgtcgtcggacgac
agcgaggccagcggcgaggagggcggcagagcccccaaggccaagaacaaggcgccggcg
ggcaaggcgggcaggaggaagaagaagaagggcccggacgatgaggccttggaggacagt
gacgacggggacttcgagggccaggaggtggactacatgtccgacggctccagcagctcc
caggacgagatggagagcaagcccacagtgaccaagcaggaggaggggcccaagggtgtg
gacgagcagagcgagagcagcgaggagagtgaggaggagaagccgcccgaggaggacaag
gaggaggaggaggagaaggcggctccgaccccccaggagaagcagcgcaggaaagacagc
agtgacgagtcggacagctcggaggagagcgacatcgacagcgaggcctcctcggccctc
ttcatggcgaagaagaagacgccccccaagagggagcggaagccgtcgggaggcagctcg
cgggggaacagccggcccggcacgcccagcgcggagggcagcacctcgtgcaccctgcgg
gcggccgccagcaagctggagcaggggaagcggacgagcgacatgcccacagccaagcgg
ctccggatggatgccgggccccagggcctgtccgggaagtccaccccccagccccagtcc
gggaagtcgacgcccagcagcggcgacgtgcaggtgaccgaggacgccgtgcgccgctac
ctgacgcgcaaacccatgaccaccaaggacctgctgaagaagttccagaccaagaagacg
gggctgagcagcgagcagacggtgaacgtgctggcgcagatcctcaagcgcctcaacccc
gagcgcaagatgatcaacgacaagatgcacttctccctcaaggagtga
DBGET
integrated database retrieval system
