Trichechus manatus latirostris (Florida manatee): 101352291
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Entry
101352291 CDS
T05135
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101352291
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101352291
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101352291
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
101352291
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
DUF4407
PI3K_P85_iSH2
Motif
Other DBs
NCBI-GeneID:
101352291
NCBI-ProteinID:
XP_004381799
UniProt:
A0A2Y9DV23
LinkDB
All DBs
Position
Unknown
AA seq
753 aa
AA seq
DB search
MADKRKLQGEIDRCLKKVSEGVEQFEDIWQKLHNAANANQKEKYEADLKKEIKKLQRLRD
QIKTWVASNEIKDKRQLIDNRKLIETQMERFKVVERETKTKAYSKEGLGLAQKVDPAQKE
KEEVGQWLTNTIDTLNMQVDQFESEVESLSVQTRKKKGDKDKQDRIEGLKRHIEKHRYHV
RMLETILRMLDNDSILVDAIRKIKDDVEYYVDSSQYPDFEENEFLYDDLDLEDIPQALVA
TSPPSHSHMEDEVFNQSSSTPTSTTSSSPIPPSPANCTTENSEDDKKRGRSTDSEVSQSP
AKNGSKPVHSNQHPQSPAVPPSYSSGPPPATSTLSTTPGNNGAPTPAAPSSALGSKASPA
PSHNSGTPAPYAQAVAPPAPSGPSAAQPRPPSVQPGGGGGGGGGGGGSNSSSNSSGAGGA
GKQNGATSYSSVVADSPAEVALSSSGGSSTNSQALGPPSGPHNPPPSTSKEPSVAAPTGA
GGVAPGSGNNAGGPSLLVPLPVNPPSSPTPSFSEAKAAGALLNGPPQFSTAPEIKAPEPL
SSLKSMAERAAISSGIEDPVPTLHLTERDIILSSTSAPPASAQPPLQLSEVNIPLSLGVC
PLGPVPLTKEQLYQQAMEEAAWHHMPHPSDSERIRQYLPRNPCPTPPYHHQMPPPHSDTV
EFYQRLSTETLFFIFYYLEGTKAQYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEFE
QGTYIYFDYEKWGQRKKEGFTFEYRYLEDRDLQ
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaagcgcaaactccaaggtgagattgatcgctgcctcaagaaggtgtccgag
ggcgtggagcagttcgaggatatttggcagaagctccacaatgcagccaacgcgaaccag
aaagaaaagtatgaggctgacctaaagaaggagattaagaagctacaacggctgagggac
cagatcaaaacatgggtagcgtccaacgagatcaaggacaagaggcagctcatagacaac
cgcaagctcattgagacgcaaatggaacggttcaaggtggtggaacgagagaccaaaacc
aaagcttacagcaaggagggcctgggtctggcgcagaaggtggaccccgcccagaaggag
aaggaagaggtcggccagtggctcacgaacaccatcgacaccctaaacatgcaggtggac
cagtttgagagtgaggtggagtccctgtcggtgcagacacgcaagaagaagggcgacaag
gataagcaggaccggatcgagggcttgaagcggcacattgaaaagcaccgctatcatgtg
cgcatgctggagaccatcctgcgcatgctagacaacgattccatccttgtcgacgccatc
cgcaagatcaaggacgatgtcgagtactacgtcgactcctcccagtaccctgacttcgag
gagaacgagttcctctacgacgacctggacctcgaggacattccacaggcgctggtcgcc
acctccccacccagccacagccacatggaggatgaggtcttcaaccagtcaagcagcacg
cccacctcaaccacctctagttcgcccatcccgcccagcccagccaactgcaccacggaa
aactccgaggacgacaagaagaggggcagatcgacagacagtgaggtcagccagtctcca
gccaaaaacggctccaagcctgtccacagcaaccagcaccctcagtccccagctgtgccg
cccagctactcctctggccccccacctgccacctctaccctgagcaccacccctggcaac
aacggggcccctaccccagcagcaccctcaagtgccctgggatccaaggccagtccagct
cccagccacaactcgggcacccccgctccctacgcccaggctgtggccccaccagccccc
agtgggcccagcgcagcccagccccggccacccagcgtccagcctggcgggggaggcggt
ggtggaggaggaggaggagggagcaacagcagcagtaacagcagcggagctggaggtgct
ggcaagcagaatggcgccaccagttacagctccgtggtggcagacagcccagcagaggtg
gctctgagcagcagtgggggcagcagcaccaacagccaggctctgggtcccccctccggc
ccccacaacccacctcccagcacctcaaaggaacccagtgtggcagctccaacgggggct
gggggtgtggccccaggctcagggaacaacgccgggggacccagcctcctggtgccacta
cctgtgaatccccccagctccccaacgcccagcttcagtgaggccaaggcagcaggggca
ctactcaatgggcccccgcagttcagcacagccccggagatcaaggcgcccgagcctctg
agctccttgaagtccatggcagagcgggcagccatcagctctggcatcgaggaccctgtg
ccaacgctgcacctgacagagcgagacatcatcctgagcagtacatcggccccgccagcc
tcagcccagccacctctgcagctgtcggaggtgaacatcccactgtccctgggcgtgtgt
cccttggggcctgtgcccctcaccaaggagcagctctaccagcaggccatggaagaggcc
gcctggcaccacatgccccacccttctgactccgagcgcatccggcagtacctcccccgg
aacccatgtccaacgcccccctaccaccaccagatgccgcccccgcactcggacactgtg
gagttctaccagcgcctgtcgactgagacgctcttcttcatcttctactatctggagggc
actaaggcacagtacctggcagccaaggccctaaagaagcagtcctggcgattccacacc
aagtacatgatgtggttccagcggcacgaggagcccaagaccatcacggatgagtttgaa
cagggcacctacatctacttcgactacgagaagtggggccagcggaagaaggaaggcttc
accttcgaataccgctacctggaggaccgggacctccagtga
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