Trichechus manatus latirostris (Florida manatee): 101352301
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Entry
101352301 CDS
T05135
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X4
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
101352301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tmu03019
]
101352301
Messenger RNA biogenesis [BR:
tmu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
101352301
mRNA degradation factors
3'-5' decay
Pan complex
101352301
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pan3_PK
zf-CCCH
zf_CCCH_4
Pkinase
zf-CCCH_4
Torus
Motif
Other DBs
NCBI-GeneID:
101352301
NCBI-ProteinID:
XP_004384200
UniProt:
A0A2Y9DZF9
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MNSGGGLPPPSAAASSSSSSLAAAVAVVAPPGVGGVPGGATAGVKLKYCRYYAKDKTCFY
GEECQFLHEDPAAGAAPGLGLHSNSVPLALAGAPGAGFPPGAVPGGGAGPPPPPGPKKPD
LGAPGAAGGGGGSGGGLDGARLAIPGIDGGALTDTSLTDSYFSTSFIGVNGFGSPVETKY
PLMQRMTNSSSSPSLLNDSAKPYAGHDALTSPASSLFNDFGALNISQRRKPRKYRLEERL
VPMGSKARKAKNPIGCLADRCKSGVPINMVWWNRVTENNLQTPNPTASEFIPKGGSTSRL
SNVSQSNMSAFSQVFSHPSMGSPATAGLAPGLSLSAGSSPLHSPKITPHTSPAPRRRSHT
PNPASYMVPSSASTPVNNPVSQTPSSGQVIQKETVGGTTYFYTDTTPAPVTGMVFPNYHI
YPPTAPHVAYMQPKANAPSFFMADELRQELINRHLITMAQIDQADMPAVPTEVDSYHSLF
PLEPLPPPNRIQKSSNFGYITSCYKAVNSKDDLPYCLRRIHGFRLVNTKCMVLVDMWKKI
QHSNIVTLREVFTTKAFAEPSLVFAYDFHAGGETMMSRHFNDPNADAYFTKRKWGQHDGP
LPRQHAGLLPESLIWAYIVQLSSALRTIHTAGLACRVMDPTKILITGKTRLRVNCVGVFD
VLTFDNSQNNNPLALMAQYQQADLISLGKVVLALACNSLAGIQRENLQKAMELVTINYSS
DLKNLILYLLTDQNRMRSVNDIMPMIGARFYTQLDAAQMRNDVIEEDLAKEVQNGRLFRL
LAKLGTINERPEFQKDPTWSETGDRYLLKLFRDHLFHQVTEAGAPWIDLSHIISCLNKLD
AGVPEKISLISRDEKSVLVVTYSDLKRCFENTFQELIAAANGQL
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgaacagtggcggcggcctcccgcccccctcggccgccgcctcctcttcctcctcctcg
ctggcggcggcagtggcggtggtggccccgccgggggtcgggggtgtccccggcggggcg
acggcgggagtgaagctgaagtactgccgctactacgctaaggataagacttgcttctac
ggggaggagtgtcagttcctgcatgaggacccagccgccggggctgccccgggcctcggc
ctccatagcaacagcgtccccctggcgttggcgggcgcgcccggcgccggctttccgccc
ggagcggtcccgggcggaggagcggggccgcccccgccgccggggcccaagaagccggac
ctgggggcacccggagccgcaggcggcggaggcggcagcggcgggggactcgatggagcg
cggctggcaattcctggaatagatggaggtgctttaactgatactagtctcacagattcc
tatttcagcaccagctttattggagtcaatggatttggaagccctgtagaaacaaaatat
cctttgatgcagagaatgactaatagtagcagctccccaagccttctaaatgacagtgcc
aagccatatgcaggccatgatgctctaacttcacctgcttcatccttgtttaatgacttt
ggtgccctcaacatctctcagagaagaaagccaagaaagtatcgcctggaggagaggcta
gttccgatgggatcaaaggcacgaaaagcaaagaaccctattggctgccttgctgacagg
tgtaaatcaggagtacccatcaatatggtttggtggaacagagtcacagaaaacaattta
cagacaccaaatccaactgcaagcgagtttattcctaaaggaggatcaacctccaggctg
agtaacgtgtcccagtcaaatatgtctgccttctctcaagtgttctctcacccatctatg
ggaagccctgctactgctggattagcaccaggtctgtcgttgtctgctggatcttctcct
ttgcattcccccaagattactccacatacgtctcctgctcccagaagaagaagtcacact
ccaaatccagccagttacatggtgccttctagtgcctctacacctgttaataaccctgtt
tctcagactccatcttccggtcaggtgatccaaaaggaaactgtaggtggaacgacttac
ttctatacggacacaactccagcacctgtgactggaatggtatttccaaactatcatatt
tatcctccaactgcacctcacgttgcttatatgcaaccaaaagcaaatgcaccttccttc
ttcatggctgatgaactccgacaggagctgatcaacagacatttaataacaatggcacaa
attgatcaagcagatatgccagccgtccctacagaagttgacagctaccatagcctattc
cctctagaaccactgccaccacccaaccggatacagaaatcgagtaattttgggtacatt
acatcttgctacaaagctgtaaatagtaaagatgacctgccatattgccttcggaggata
catggttttcgtcttgttaacacaaagtgcatggtattggttgatatgtggaaaaaaatt
cagcactcaaatattgtaaccttgcgggaagtatttaccactaaagcatttgcagaacct
tctcttgtgtttgcatacgatttccatgctgggggagaaactatgatgagcagacacttt
aatgaccctaatgctgatgcctattttacaaagagaaagtggggtcaacatgatggacca
ttgcccagacagcatgctggattattgccagaatctcttatttgggcgtatatcgtccag
ctaagttccgcattgcgtaccattcatacagcaggtttggcatgtcgagttatggaccca
acaaagattctgataactggcaaaacgaggttgcgagtaaattgtgttggagtttttgat
gttttaacatttgataacagtcagaataataatccattggcattaatggctcaataccag
caagcagatctgatatcattaggaaaagttgtcttggctttggcttgcaactctttggca
ggaattcaacgagagaatttacagaaagccatggaactggtgacaatcaactactcctct
gatctgaagaatctgattttgtatttgttgactgaccaaaacaggatgcggagtgtaaat
gatattatgcccatgatcggtgctcgattttatactcagttggatgctgctcaaatgaga
aatgatgtcatagaggaagaccttgcaaaggaggttcaaaatggaagactgtttaggctt
ctagcaaaattgggaacaatcaatgagaggccggagtttcagaaggatcctacctggtca
gagactggagaccgttatctgttgaaactctttagggatcatctcttccatcaggtgaca
gaagcgggtgctccctggattgacctcagtcatatcatttcttgtcttaacaagctagat
gctggtgtgccagagaaaataagcctcatttccagagacgagaagagtgtacttgtggtg
acttacagtgacttaaagcgctgctttgaaaatacttttcaagaactaatagcagctgca
aacggtcagttgtag
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