Trichechus manatus latirostris (Florida manatee): 101352375
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Entry
101352375 CDS
T05135
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X4
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu03082
ATP-dependent chromatin remodeling
tmu04714
Thermogenesis
tmu05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
101352375
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
101352375
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
101352375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tmu03021
]
101352375
03036 Chromosome and associated proteins [BR:
tmu03036
]
101352375
Transcription machinery [BR:
tmu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
101352375
Chromosome and associated proteins [BR:
tmu03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
101352375
PBAF complex
101352375
GBAF(ncBAF) complex
101352375
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
101352375
NCBI-ProteinID:
XP_004379991
UniProt:
A0A2Y9DS01
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPCKSKAAASATRE
WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLA
YQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVE
EAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGTDEARAEGQATDEKKEPKDPREGGG
VAEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPVVDPEKEKEPKEGQEEVLKEVVE
SEGDRKAKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLE
IKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQ
PPPTLPTGSQPVPPTGAAGPPSIHGLAVAPASLAPAPAGTGAPPGSLGPSEQIGQAGPIA
GPQQQQPAGAPQPGAVPSGVPPAGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLG
LPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMA
NPLHPNLTATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPT
APSPGTVTPVPPPQ
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacaca
gtgacccagttcgacaacgtgcggctctggctcggcaaaaactacaagaagtatatacaa
gctgaaccacccaccaacaagtccctatctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccactcactaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggttccctttgccatatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttatgatttccagaatccatcacgcatggaccgcaac
gtggaaatgttcatgaccattgagaagtccttggtacagaataactgcctctctcgacct
aacatttttctgtgcccagaaattgagcccaaactgctagggaaattaaaggacattata
aagagacaccagggaacagtcactgaggacaagaacaatgcctctcatgttgtgtatccc
gtccccgggaacctagaagaagaggaatgggtacgaccagtcatgaagagggataagcag
gttcttctgcattggggctactatcctgacagttatgacacatggatcccagctagtgaa
attgaagcctctgtggaggatgctccgactcctgaaaaacctaggaaggttcatgcaaag
tggatcctggacacagacaccttcaatgagtggatgaatgaggaagactacgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaaaatttcagccaagacactgacagatgag
gtgaacagcccagattcggatcgacgggacaagaagggggggaactataagaagaggaag
cgctccccctctccctcacctaccccagaagctaagaagaaaaatgctaagaaaggcccc
tcaacaccttacaccaagtcaaagcgtggccacagagaagaggagcaagaagatctgaca
aaggacatggatgagccctccccagtccccaatgtagaagaggtgacattgcccaaaaca
gtcaacacaaagaaggactcggagtcagccccagtcaaaggaggcaccatgactgacctg
gatgaacaggaggacgagagcatggagaccacgggcaaggatgaggatgagaacagtaca
gggaacaaaggggagcagaccaagaatccagacctccatgaggacaacgtgactgaacag
acccaccacatcatcatccccagctatgctgcctggtttgactataatagcgttcatgcc
attgagcggcgggctctccctgagttctttaacggcaagaacaagtccaagactccagag
atctacctggcctatcgaaacttcatgattgacacttaccgactgaacccccaagagtat
ctcacctccactgcctgccgcaggaacctggcgggtgatgtctgcgccatcatgagggtc
catgccttcctcgaacagtggggtcttattaactaccaggtggatgctgagagccgacca
accccaatggggcctccacccacgtctcacttccatgtcttggcagacacaccatcaggg
ctggtgcctctgcagcccaagaccccgcagcagacctctgcttcccaacaaatgctcaac
tttcctgacaaaggcaaagagaaaccaacagacatgcagaactttgggctgcgcactgac
atgtacaccaagaagaacgtcccctgtaagagcaaagccgcagccagtgccactcgcgag
tggacagaacaggagaccctgctactcttggaggcactggaaatgtacaaagatgactgg
aacaaagtatcagagcacgtgggaagccgcacgcaggacgagtgcatcttgcattttctt
cgtcttcccattgaagacccgtacctggaggattcagaggcctccctgggccccctggcc
taccagcccatccccttcagtcagtcgggcaaccctgtcatgagcactgtggccttcctg
gcctctgttgtcgatcctcgagtcgcctctgctgctgcaaagtcagccctagaggagttc
tccaagatgaaggaagaggtgcccacagccctggtggaggcccatgttcgcaaagtggaa
gaagcagccaaagtgacaggcaaggcagacccagcctttggtctggaaagcagtggcatt
gcaggaaccacctcagatgagcctgagcggatcgaggagagcgggactgacgaggcacgg
gctgagggccaggccacagatgagaagaaggagcccaaggatccccgagaaggaggaggg
gttgcagaggaagaagcaaaggagaaaaccagtgaggctcccaagaaggatgaagagaag
gggaaagaaggcgatagcgagaaggagtcagagaagagcgatggggacccagtagtggat
cccgagaaggagaaggagccaaaggaagggcaggaggaagtgcttaaggaagtagtggag
tcagagggcgacaggaaggccaaagtggagcgggacatcggtgagggcaacctctccacc
gcagcggccgctgccctggctgccgcagccgtcaaggccaagcacttggctgctgtcgag
gagaggaagatcaaatctctggtggccctgctggtggagacccagatgaaaaagttggag
atcaaacttcggcactttgaggagctggagacaatcatggaccgggagcgagaagcactg
gagtatcagaggcagcagctcctggccgacagacaagccttccacatggagcagctgaag
tacgcggagatgagggcccggcagcagcacttccaacagatgcaccaacagcagcagcag
ccacctccaaccctgcccacaggctcccagcctgtcccacccacaggggctgctgggcca
ccgtcaatccatggcttggctgtggctccggcttctctggcccctgctcctgctggcacc
ggggcacctcctggaagcttgggcccctctgaacagattgggcaggcagggccaattgca
gggccacagcagcagcagccagctggagccccccagcctggggcagtcccatcaggggta
ccccccgctggaccccatggcccctcaccgttccccaaccaacaaactcctccctcaatg
atgccaggggcagtgccaggcagcgggcacccaggcgtggcgggtaatgctcctttgggt
ttgccttttggcatgccgcctcctcctcctcctcctgctccatccatcatcccatttggt
agtctagccgactccatcagtattaaccttcccgctcctcctaacctgcatgggcatcac
catcatctcccgtttgccccgggcactctccccccacctaacctgcctgtgtccatggcg
aaccctctacatcctaacctgacggcgaccaccaccatgccatcctccttgcctctcggg
ccggggctcggatccgccgcagcccagagccctgccattgtggcagctgttcagggcaac
ctcctgcctagtgccagcccactgccagacccaggcaccccgctgcctccagaccccacg
gccccgagcccaggcactgtcacccctgtgccacctccacagtga
DBGET
integrated database retrieval system
