Trichechus manatus latirostris (Florida manatee): 101352589
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Entry
101352589 CDS
T05135
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tmu03009
]
101352589
Ribosome biogenesis [BR:
tmu03009
]
Eukaryotic type
90S particles
Other 90S particles
101352589
Pre-60S particles
Other pre-60S particles
101352589
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
FH3_FHOD1-3
Zip
Motif
Other DBs
NCBI-GeneID:
101352589
NCBI-ProteinID:
XP_004370041
UniProt:
A0A2Y9D987
LinkDB
All DBs
Position
Unknown
AA seq
1297 aa
AA seq
DB search
MGRSGKLPSGVSAKLKRWKKGHSSDSNPAICRHRQVARSRFFSRPSGKSDLTVDAVKLHN
ELQSGSLRVGKSEAPETAMEEEVDLAVTEKSSGTFLSGLSDCTNVTFSKVQRFWESNSAA
HKEICAVLAAVTEVIRSQGGKETETEYFAALMTTMEAVESPESLAAVAYLLNLVLKRVPS
PVLIKKFSDTSKAFMDIISAQASSGSTSALRWVLSCLATLLRKQNLEVWSYPVTLQVYHG
LLSFTVHAKPKVRKAAQHGVCSVLKGSEFMFGEKAPAHHPAAVCTAKFCIQEIEKSGGSK
ETTTTLHMLTLLKDVLPSFPEGLVKSCSETLLRIMTLNHVLVTACAMRAFHSLFHAKPGP
GTLTAELNAQIITALYDYVPSENDLQPLLAWLTVMEKAHINLVRLQRDLGLGHLPRFFGT
AVTYLLSPHSQVVVTATQSLKEILMECVAPHMASIGSITSAAPGPAQYVTKMFRAVEEGL
TYKFHAAWSSVLQLLCVFFEVCGRQAHPVMKKCLQSLCDLRLSPHFPHTAALDQALGAAV
TSMGPEVVLQAVPLEIDGSEETLDFPRSWLLPVIRDHVQETRLGFFTTYFLPLANILKSK
AMELAQVGSTVESKIYDTLQWQIWTLLPGFCTRPTDVATSFKGLARTLGTAISERPDLRV
TVCQALRTLITKGCEAEADQAEVSRFAKNFLPILFNLYGQPVAAGDTPAPRRTVLETIKT
YLTITEPQLVNGFLEKASEKVLDPASSDFTRLSVLDLVVALAPHADEAAISKLYSTIRPY
LESKVHGVQKKAYRVLEEVCASPRGPAARFVHSHLDDLKQTLLDSLRSTSSPAKRPRLKC
LIHIVKKLSAEHEEFIAALVPEVILCTKEVSVGARKNAFALLVEMGHAFLRFGSNQEEAL
QRYLVLIYPGLVGAVTMVSCSILALTHLLFEFKGLMGTSMVEQLLKNVCLLLASRTRDVV
KSALGFIKVVVVVTDVAHLAKHVQLVMEAIGKLSDDMRRHFRMKLRNLFTKFIRKFGFEL
VKRLLPVEYHKVLVNIRKAETRAKRQRSLNQAAMEEEEEDEEEEPAQGKGDSIEEILADS
EDEEDDEKQERSRGKEQRKLARQRSRAWLKEGGGDEPLNFLDPKVAQRVLATQPGPGRGK
KKDHGFKVSADGRLIIRETDDGDQVEEEDGTKGEEEEMADLMEDMGVRSKKHQKLKRRQE
ADDEELEMPPQYQAGGSGIHRPLAKKATPGAEYKAKKAKGDVKKKGRLDPYAYIPLNRTK
LNRRKKVKLQGQFKGLVKAAQRGSQAGHKLRRKDHRP
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgctcggggaagttgccgtccggtgtctcggctaagttgaagcgctggaagaaa
ggccacagcagcgacagcaaccccgccatttgccgccaccgccaggttgcccgcagccgc
ttcttcagccggccctcagggaagagcgacctgacagttgatgctgtgaagttacataat
gagctgcagtcagggtcgctgcgcgtgggcaaaagcgaagcccccgagacggccatggaa
gaagaggtggatctggctgtcaccgagaagtcctcgggcaccttcctgagcggcctctct
gactgcacaaacgtcaccttcagcaaagtgcagcgcttctgggagtccaactcagctgcc
cacaaggagatctgtgctgtcctggctgctgtcaccgaggtgatccgctcccagggaggg
aaggagacagagactgagtactttgctgcactgatgacaacgatggaagcagtggagtcc
ccggagtctctggccgctgtagcttacctgctgaaccttgtcttaaagcgcgtgcccagc
cctgttctcattaagaagttctctgacacctccaaagccttcatggacatcatatcagca
caggccagcagtggctccacctctgccctccgatgggtcctctcctgcctggccaccctt
ctgcggaagcaaaacctggaggtctggagctaccctgtgaccctgcaggtgtaccatggg
ctgctgagcttcactgtgcatgccaagcccaaggtccggaaggctgcccagcatggagtg
tgctctgtcctcaagggcagtgagttcatgtttggtgaaaaggcccctgcccatcatcct
gctgctgtttgcaccgccaagttctgcatccaggagattgagaagtctggaggctccaag
gagactaccaccacgctgcacatgctgacgctgctgaaggacgtgttgcccagcttcccg
gaaggcctagtcaagagctgcagtgagactctcctcaggatcatgaccttgaaccatgtg
ctggtgacagcctgtgccatgcgggcctttcacagcctcttccacgccaagcctggcccg
ggtaccctgacggcagagctcaatgcccagatcatcacggccttgtacgactacgtcccc
agtgagaatgacttacaacccctgctggcctggcttacggtcatggagaaagcccacatc
aacctggtcaggttgcagcgggacctagggctgggccacctccctcgcttttttggaact
gcagtgacctacctcctgtccccgcactcacaggtggtagttacagccacccagagcctc
aaggaaatcctgatggaatgtgtcgctcctcacatggccagcatcggctccatcacctct
gcagccccagggcctgcccagtatgtcaccaagatgttcagggcagtggaggagggcctg
acgtataaattccacgcggcgtggagctccgtgttgcagctgctatgtgttttcttcgag
gtgtgtggacggcaggcccatcctgtgatgaagaagtgcctccagtctctgtgtgacctg
cgcctgtccccccacttcccccacacggcagcactggaccaggcactgggggctgcggtg
accagcatgggacctgaggtggtgttgcaggctgtgcctttggaaattgatggctctgaa
gagactctggatttcccacggagctggctgctgcctgtcatccgggaccacgtccaggaa
actcgacttggtttcttcaccacctactttttgcccctggcgaacatcctgaaaagcaaa
gcaatggagctagcccaggtgggcagcacagtggagtccaagatctacgatacactccag
tggcagatctggaccctcctgcctgggttctgcacgaggcccacagacgtggccacctcc
ttcaaagggctggcacggacactgggcacagccatcagcgagcgtccagacctgagggtc
acggtgtgtcaggccttgcgcaccctcatcaccaagggctgtgaggcggaggccgaccaa
gccgaagtgagccgctttgccaagaacttcctgccaatcctctttaacctgtatgggcag
cctgttgccgccggggacaccccagcccctcgccggactgtgcttgaaactatcaagact
tacctcaccataaccgagcctcagttggtgaatggtttcctggaaaaagccagtgagaag
gtacttgaccctgccagctctgacttcaccagattgtctgttctggacctggttgtggcc
ttggctcctcatgctgacgaagctgcaatcagcaagctgtattccaccatccggccctac
ctagagagcaaagtacacggggtacagaagaaggcctaccgtgtgctggaggaggtgtgc
gccagcccccggggccctgcggcccgctttgtgcacagccacctggacgacctgaagcag
accctcctggactcactgcggagcacgtcctcgccggccaagaggccccgtctgaagtgc
ctcatacacattgtgaagaaactgtcagcggagcatgaggagttcattgccgccctcgtt
ccagaggtgatcctgtgcaccaaggaggtgtcggtgggggctcggaagaacgcctttgcc
ctgctggtggagatgggccacgcgttcctgcggtttggctcgaatcaggaagaggccctg
cagcgctaccttgtcctgatataccctggcctcgtgggcgctgtgactatggtcagctgc
agcatcctggccctgacccacctccttttcgagtttaaaggcctgatggggaccagcatg
gtagagcagctgctgaagaacgtgtgcttgctcctggcctcccgcacccgtgacgtcgtc
aaatcggcgctgggcttcatcaaggtggtggtggtggtcacggacgtggcgcacctggcc
aagcatgtacagctggtgatggaagccatcgggaagctttcagatgacatgcggcggcac
ttccgtatgaagctgcggaacctattcaccaagttcatccgcaagtttggatttgagcta
gtgaagcggctgctgcctgtggagtaccacaaagtcctggtaaacatccggaaagccgag
acccgggccaagaggcagcgttccctgaaccaggctgccatggaggaggaggaggaagat
gaagaggaggagcccgcccagggcaaaggcgacagcattgaggagattctggctgactca
gaggatgaggaagatgatgagaagcaggaaaggagccggggcaaggagcagcggaagctg
gctcgacagaggagcagggcatggctgaaggagggtggcggggatgagcccctcaacttc
ctagaccccaaggtggcccagcgagtcctagccactcagcctgggccaggccggggcaag
aagaaggaccacggcttcaaggtgagcgccgatggccggctgatcatccgggagacggac
gacggcgaccaggtggaggaagaggacggcactaaaggtgaggaggaggagatggctgac
ctgatggaagacatgggtgtccggagtaaaaagcaccagaagcttaagcggcgccaagag
gctgacgacgaggagctggagatgccccctcagtaccaagctggaggctctggcatccat
cgccctctggccaagaaagccacgcctggggctgaatacaaggccaagaaagcaaagggt
gacgtgaagaagaaaggtcggcttgacccctatgcctacatccccctcaacagaaccaag
ctcaaccgcaggaagaaggtgaagctacagggacagttcaaaggcctggtgaaagctgcc
cagcgggggtcccaggcaggacacaaactccgaagaaaggatcacagaccctaa
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