Trichechus manatus latirostris (Florida manatee): 101352639
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Entry
101352639 CDS
T05135
Name
(RefSeq) protocadherin beta-16
KO
K16494
protocadherin beta
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tmu04515
]
101352639
Cell adhesion molecules [BR:
tmu04515
]
Cadherins
Protocadherins
101352639
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
101352639
NCBI-ProteinID:
XP_004381163
UniProt:
A0A2Y9DTY8
LinkDB
All DBs
Position
Unknown
AA seq
797 aa
AA seq
DB search
MEIGWMRIRRQRQVLIFFVLLRLFRAGARLGPYSVVEETERGSFVANLGKDLGVGLTELS
TRGARIISQGNKEHLQLKVQTGDLLINEKLDREELCGPTEPCVLHFQVLMEKPLEIFQAE
LRVRDINDHSPVFTEREMILKILENSPLGIAFPLKNALDLDVGSNNVQKYEISPNSHFRV
LTSNRSDGRKYPELLLDKELDREEEPELRLTLTALDGGSPSRSGTTQVRVEVVDINDNAP
EFEQTLYKVQIPEDSPIGALVVTVSARDLDSGVNGKISYTLFQPSEDTSKILEVNPTTGE
IRLTTQVDYETIPSCEVDIEATDGGGLSGKCTLLLQVVDVNDNAPEVAVSALTSPIPENS
PEIVVAVFSVSDPDSGDNGKTVSSIQDDLPFLLKPSVKNFYTLVTKRALDREARAEYNIT
ITFTDLGIPRLKTQCNLTVLVSDVNDNAPTFSQTSYTLFVRENNSPALHIGSVSATDRDS
GTNAQLTYSLLPPQDPHLPLTSLISINADNGHLFALRSLDYEALRAFEFRVGATDAGSPA
LSSEALVRVVVVDDNDNSPFVLYPLQNGSAPCTELVPRAAEAGYLVTKVVAVDGDSGQNA
WLSYQLLKSTEPGLFSVWAHNGEVRTARLLSERDAAKHRLVVLVKDNGEPPMSSTVTLHL
LLVDGFSQPYLRLPELAPDEAQADLLTVYLVIALASVSSLFLFSVFLFVAVRLCRRNRAT
FVGGCSVPEGHFPGHLVDVSGTRTLSHSYQYEVCLTGGSVTSEFKFLKPIISDFPPQGTT
GEIKESHTFQNSCGFNY
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atggaaattggatggatgcgcattcggagacaaaggcaagtcttaattttctttgttttg
ctcaggttgtttagggcgggcgcccggttggggccttattcggtggtggaagaaacagag
agaggctcctttgtggcaaacctagggaaagacctcggggttggattgacagagctgtcc
acacgcggggcccggattatttcccaggggaacaaagagcacttgcagctgaaggttcag
actggggatttgctcataaacgagaaactagacagagaggagctttgtggccccactgag
ccttgtgtactacatttccaagtgttaatggaaaagcctttagagatatttcaggctgaa
ctgagggtgagagacataaatgaccattctcccgtattcactgaaagagaaatgatacta
aaaatactggaaaacagtcctctaggaattgcgttccctctgaagaatgctctggacttg
gacgtaggaagcaacaatgttcagaaatatgaaatcagtcccaactcccatttccgggtt
ctaaccagcaatcgcagtgacggcaggaaataccctgagctgctgctggataaagagctg
gatcgggaggaggagcctgaactcagattaaccctcacagcgctggatggtggctctcca
tccaggtctgggaccacccaggtacgcgtcgaagtggtggacataaacgacaacgccccc
gagtttgagcagactctctacaaggtgcagattcccgaggacagccccataggcgccctg
gttgtcaccgtctctgccagggatttagacagcggagtcaatggaaaaatatcatacaca
ctgtttcagccttcggaagatactagcaaaattttggaggttaatcctaccaccggagaa
attcgactgacaacacaagtagattatgaaacaattccgtcttgtgaagtggacatcgag
gccacggatgggggaggtctttcaggaaaatgcactcttctcctgcaggtggtggacgtg
aatgacaatgccccagaagtggcggtgtctgcactcaccagtcccatccccgagaactcg
cctgagattgtagttgctgttttcagtgtttcggatcctgactccggggacaacggcaag
acggtttcctctatccaggatgaccttccgtttcttctgaaaccttcagtcaagaacttt
tacactctggtaaccaagagagcactagacagagaagcaagagcggagtacaatatcacc
atcactttcacggatttggggattcccaggctgaaaacccagtgcaacctaacggtgctg
gtttccgacgtcaacgacaacgctcccactttcagtcaaacttcatacaccctgttcgtc
cgcgagaacaacagccccgccctgcacataggcagcgtcagcgccacagacagagactca
ggcaccaacgcccaactcacctactcgctgctgccgccccaggacccgcacctccctctc
acctccttgatctccatcaacgcggacaacgggcacctgttcgctctcaggtcgctggat
tacgaggccctgcgagccttcgagttccgcgtgggcgccacagacgcaggctccccggcg
ctgagcagcgaggcgctggtgcgcgtggtggtcgtggacgacaacgacaactcgcccttc
gtgctgtacccgctgcagaacggctctgcgccctgcaccgagctggtgcccagggcggct
gaggcgggctacctggtgaccaaggtggtggcggtggacggcgactcgggccagaacgcc
tggctgtcctaccagctgctcaagtccacggagcccgggctgttcagcgtgtgggcgcac
aatggcgaggtgcgcaccgccaggctgctgagcgagcgcgacgccgccaagcacagactc
gtcgttctggtcaaggacaatggcgagccgccaatgtcgtccaccgtcacactgcacctg
ctcctggtggatggcttctcgcagccctacctgcgtttgccggagctggccccagacgag
gcccaggccgacttgctcacagtctacttggtcattgcgttggcgtcggtctcttctctg
ttcctgttctcagtgttcctgttcgtcgccgtgcggctgtgcaggaggaacagggccaca
tttgtgggtggctgctccgtgcctgagggccactttccgggccacttagtggacgtcagc
ggcaccaggactctgtcccacagctaccagtatgaggtgtgtctgacaggaggttctgtg
accagcgagttcaagtttcttaagccaattatttctgactttcctccccagggcactacc
ggtgaaatcaaggaaagccacactttccagaatagctgtggatttaattattga
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