Trichechus manatus latirostris (Florida manatee): 101352683
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Entry
101352683 CDS
T05135
Name
(RefSeq) nuclear factor NF-kappa-B p100 subunit isoform X1
KO
K04469
nuclear factor of kappa light polypeptide gene enhancer in B-cells 2
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Pathway
tmu04010
MAPK signaling pathway
tmu04064
NF-kappa B signaling pathway
tmu04380
Osteoclast differentiation
tmu04625
C-type lectin receptor signaling pathway
tmu05134
Legionellosis
tmu05166
Human T-cell leukemia virus 1 infection
tmu05169
Epstein-Barr virus infection
tmu05200
Pathways in cancer
tmu05203
Viral carcinogenesis
tmu05224
Breast cancer
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
101352683
04064 NF-kappa B signaling pathway
101352683
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
101352683
09158 Development and regeneration
04380 Osteoclast differentiation
101352683
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
101352683
05203 Viral carcinogenesis
101352683
09162 Cancer: specific types
05224 Breast cancer
101352683
09172 Infectious disease: viral
05166 Human T-cell leukemia virus 1 infection
101352683
05169 Epstein-Barr virus infection
101352683
09171 Infectious disease: bacterial
05134 Legionellosis
101352683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tmu03000
]
101352683
Transcription factors [BR:
tmu03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
101352683
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_5
Ank_4
Death
Nlrc4-like_WHD
Motif
Other DBs
NCBI-GeneID:
101352683
NCBI-ProteinID:
XP_004370135
UniProt:
A0A2Y9D8T5
LinkDB
All DBs
Position
Unknown
AA seq
894 aa
AA seq
DB search
MDHCYDPALDGIMEYDFKFNPSIVEPKEPAPETADGPYLVIVEQPKQRGFRFRYGCEGPS
HGGLPGASSEKGRKTYPTVKICNYEGPAKIEVDLVTHSDPPRAHAHSLVGKQCSELGVCT
VSVGPKDMTAQFNNLGVLHVTKKNMMEIMTQKLQRQRLRSRPQGLTDAERRELEQEAKEL
KKVMDLSIVRLRFSAFLRASDGSFSLPLKPVISHPIHDSKSPGASNLKISRMDKTAGSVR
GGDEVYLLCDKVQKDDIEVRFYEDDENGWQAFGDFSPTDVHKQYAIVFRTPPYHKMKIER
PVTVFLQLKRKRGGDVSDSKQFTYYPLVEDKEEVQRKRRKALPTFSQPFGGGSHMGGGSG
GSAGGYGGAGGGGGSLGFFPSSLAYSPYQSGAAPMGCYPGGGGGAQMAASAPVADAGEEA
AEPSAPRREPSAPEMLAQAREYNARLFGLAQRSARALLDYGVTADARSLLAGQRHLLTAQ
DENGDTPLHLAIIHGQMNVIEQIAHVIYHAPYLGVVNLTNHLHQTPLHLAVITGQTSVVS
FLLQVGADPALLDRHGDSAVHLALRAGAPDLLRALLQSGGPAVPQLLHTTDFEGLYPVHL
AVRARSPECLDLLVGDGAEVEAAERQGGRTALHLATEMEELGLVTHLVTKLGANVNARTF
AGNTPLHLAAGLGSPTLTRLLLKAGADIHAENEEPVCPLPSPPTSGSDSDSEGPERDTRS
SFRGHTPLDLTRSTKVRTLLLNAAQDTMEPPLTPPSPAGPGLSLGDAALQNLEQLLDGPG
AQGSWAELAERLGLRSLVDTYRKTASPSGSLLRSYELAGGDLAGLLDALSDMGLEEGVRL
LRGPEPQDKLPSTAEVKEDSAYGSQSVEQEAEKLGPPPEPPGGLCHGHPQPQVH
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggaccattgttacgacccagctctggatggcatcatggaatatgatttcaaattcaac
ccttccattgtggagcccaaggagccggccccagagacagctgatggcccctacctggtg
attgtggagcaacctaagcagcgaggcttccgatttcgctatggctgcgaaggaccctcc
catggaggactgccaggtgcctccagtgagaaaggtcggaagacctatcctactgtcaag
atctgtaactacgagggaccagcgaagatcgaggtggacctggtaacacacagtgacccg
cctcgcgctcacgcccacagcctagtgggcaagcaatgctcggagctgggggtctgcact
gtgtctgtggggcccaaggacatgactgcccagtttaacaacttgggagtattgcatgtg
accaagaagaacatgatggagattatgacacagaaacttcagaggcagcgactccgctcc
aggccccagggccttactgatgctgagcggcgggagctggagcaggaggccaaggagctg
aagaaggtgatggatctgagtatcgtgcggctgcgcttctctgccttccttcgagccagc
gacggctccttctccttgcccctgaagccagttatctcccaccccatccacgacagcaag
tctcctggggcctcgaatctgaagatttcgagaatggacaagacagctggctctgtgcgg
ggtggtgatgaagtttatctgctttgtgataaggtgcagaaagatgacattgaggtccgt
ttctacgaggatgatgaaaatggatggcaggccttcggggacttctctcccacagatgtt
cataaacagtatgccattgtgttccggacacccccctatcacaagatgaagattgagcgt
cctgtcaccgtattcctgcaactgaaacgcaagcgtgggggggatgtctctgactccaaa
cagttcacctattacccactggtagaagacaaggaggaggtgcagcggaagcggaggaag
gccttgcccaccttctcccagcccttcgggggtggctcccacatgggtggaggctctgga
ggctctgctgggggttatggaggagctggaggaggaggtggcagcctcggctttttcccc
tcctccttggcctacagcccctaccagtctggagctgccccaatgggctgctacccggga
ggcgggggcggggcgcagatggccgcctcggcgcctgtcgcagatgctggggaggaagcc
gcagagccgagcgcgccccggcgcgagccgtcggctccggagatgctggcgcaagcccgg
gagtacaacgcgcgcctgttcggcctggcgcagcgtagcgcccgtgccttgctcgactac
ggcgtcacggcggacgcgcgctcgctgctggcgggacagcgccacctgctgacggcgcag
gacgagaacggagacacgccgctgcacctggccatcatccacgggcagatgaatgtcatt
gagcagatagcccatgtgatctaccatgccccatacctcggcgtcgtcaacctcaccaac
cacctgcaccagactcccttgcacctggcggtgatcaccgggcagacgagcgtggtgagc
ttcctgctgcaggtgggcgcagaccctgcactgctggatcggcatggagactcagccgtg
catctagcgctgcgggctggtgccccggacctgctgcgcgcactgctgcagagtggaggt
cctgccgtgccccagctgctgcacacaacagactttgaggggctgtacccagtacacctg
gcagtccgtgcccgtagccctgagtgcctggatctgctggtgggtgatggagctgaggtg
gaggctgcagagcggcagggaggccgaactgccctgcatctagccacagagatggaggag
ctggggctggtcacccatctggtcaccaagcttggtgcaaacgtgaatgcccgcaccttt
gcgggaaacacgcccctacacctggcagctggtctgggatccccaaccctcacccgcctc
ctgctaaaggctggtgctgacatccatgcagaaaatgaggagcccgtgtgcccactgcct
tcacccccaacttctggtagcgactcagattctgaggggccagagagggatacccgaagc
agcttccggggccacacgcctcttgacctcactcgcagcaccaaggtgaggaccttgctg
ctaaatgctgctcaggacaccatggagcctcccctgaccccacccagcccggcagggcca
ggtctgtcacttggggatgcagctctgcagaacctggagcagctgctagatgggccagga
gcccagggaagctgggcagagctggcagagcggctggggctgcgcagcctggtagacacg
taccgaaagacggcctcgcccagcggcagcctcctgcgcagttatgagctggctggtggt
gacttggcgggtctgctagatgccctgtctgacatgggcctagaggagggagtgaggctg
ctgaggggtcccgagccccaggacaagctgcccagcacagcagaggtgaaggaggacagt
gcttacgggagccagtcagtggaacaggaggcagagaagctgggcccaccccctgagcca
ccaggagggctttgccatgggcacccccagcctcaggtgcactga
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