Trichechus manatus latirostris (Florida manatee): 101352914
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Entry
101352914 CDS
T05135
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
tmu
Trichechus manatus latirostris (Florida manatee)
Brite
KEGG Orthology (KO) [BR:
tmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tmu04121
]
101352914
Enzymes [BR:
tmu01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
101352914
Ubiquitin system [BR:
tmu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
101352914
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4
zf-RING_2
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
Sina_ZnF
zf-rbx1
zf-RING_6
TRAF3_RING
PDZ_Tricorn
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
101352914
NCBI-ProteinID:
XP_004384639
UniProt:
A0A2Y9E008
LinkDB
All DBs
Position
Unknown
AA seq
1037 aa
AA seq
DB search
MGFALERFAEAVDSDLECKLCGQVLEEPLCTPCGHVFCASCLLPWAARRRRCPLQCQPLA
PHELHQVLPLRSLIQKLRIQCDYRVRGCGRTVRLHELAAHVERCDYGPDRRRRRPGCATR
PGGGGRDVPXXXXXXXXXXVGRGGGAPRGQPGSRSGSGQGPEPGALVWRQREKALLAQLW
ALQGEVQLTARRYQEKFIQYMAHVGNFPRDLGGGHGPGGEHKSFTVVLERENDTLGFNII
GGRPNQDHQEETSTEGIYVSKILDNGPADRADGLEIHDRIIEVNGKDLSKATHEEAVEAF
RNAREPIVVQVLRRTPLSKPVYGTAPEVQLMNASTQTDITFEHIMALAKLRPPTPPVPEV
CPFLLSDSCHSLRPMEHEFYEDNEYLSSLPADADRTEDFEYEEVELCRVSSQEKLGLTVC
YRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALLCSDECKRI
VLLVARPEIQLDEGWLEDERNEFLEELNLEMLEEEHNEAMQYTANEVEQPKKQEEEEGTT
DTATSSSNNHEKDSGMGRTDESLRNDESSEQENAAEDPNGISLKSKRGLGQSQDTLGSIE
LQCNESFMSGEYIDSDCIGNQDEECEGFRQLLALKCKFRNRGEYDLYYSSSTIECNQGEQ
EGVEHELQLLNEELRNIELECQNIMQAHRLQKVTDQYGDIWALHDGGFRNYNTSIDMQRG
RLDDIIEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRMIDLTNKKNLRSTIAAN
QASSGQSSKESTSTKGKTTEQGCSIEGKEKVLESNKLPEQEKTVTEHIPYLSPYHSSSYR
YANIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSMCKESQKCSEPKMEWKVKIRSDGTR
YITKRPVRDRILKERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRR
REFMMRSRLECLKESPQSGSEGKKEINIIELSHKKMMKKRNKKILDNWMTIQELMTHGAK
SPDGTRVHNAFLSVTTV
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgctctggagcgcttcgccgaagccgtggactcggatttagagtgcaagctg
tgcggtcaggtgctggaggagcccctttgcacgccgtgcgggcacgtcttctgcgccagc
tgcctgctgccctgggcggcgcggaggcgccggtgcccgctgcagtgccagcccctggcg
ccccacgagctgcaccaggtgctgccgctgcgcagcctcatccagaagctgcgcatccag
tgtgactatcgcgtccgcggctgcggccgcactgtccgactgcacgagctggctgcgcac
gtcgagcgctgcgactacggccctgaccgccgccgtcgccgcccgggctgtgcaacgcgg
ccaggcggcggcggcagggacgtgcccnnnnnnnnnnnnnnnnnnnnnnnnnnnngggtc
ggccggggcgggggtgcgcccaggggccagccgggcagccgtagcggtagcgggcagggg
ccagaaccgggagccctggtctggaggcagcgcgagaaggcgctgctggcgcagctctgg
gcgctgcagggcgaggtgcagctcaccgcccgcaggtaccaggagaagttcatccagtac
atggctcacgtcggcaacttcccaagggacctgggcggtggccatggcccgggtggagaa
cataagtcattcaccgttgtgttagaaagagaaaatgacaccttgggatttaatattata
ggaggtcgaccaaatcaggatcatcaggaagaaacatcaactgaaggaatttatgtttca
aaaattttggacaatggacctgctgacagagcagatggcttggagattcatgacagaatt
attgaggtcaatgggaaggatctttcaaaggccacccatgaagaggcagtggaagctttt
cgaaatgccagggagcccattgtggttcaggtgttaaggcgaacaccgcttagtaaacca
gtctatggaacggccccggaagtgcagctcatgaatgccagcactcagacggacatcacc
tttgaacacatcatggccctggccaagctcaggcctcctacccctccagtgccggaagtc
tgcccgttcctgctctcagacagctgccattctcttcgtccgatggagcatgaattttat
gaggacaatgagtatctttccagcttgcctgctgatgcagacagaacagaggactttgaa
tatgaggaggtcgagttgtgtcgtgttagcagtcaggagaagctaggcctgacagtctgt
taccgaacggatgatgaagaagacactggcatttacgtcagcgaggtagatccaaatagc
attgctgccaaagatggccggattcgagaaggggaccgtattttgcaaataaatggcgag
gatgtccaaaatcgagaagaagcagtggcattgctctgtagtgatgagtgcaagagaatc
gtgctgctggttgcaaggccggagattcagctggatgaaggctggctggaagatgaaagg
aatgaattcttagaggagttaaacttggagatgttggaagaagagcataatgaagcaatg
cagtacactgccaatgaggtggagcagccaaaaaagcaagaagaagaagaaggtacaaca
gatacggcaacatcctcatccaacaatcatgagaaagacagtggaatggggcgcacagat
gagagcttacgaaatgatgagagctcagagcaggaaaatgcagctgaggaccccaacggc
atttctttgaagagcaagagagggctggggcagagccaagacactctgggaagcattgaa
cttcagtgcaatgagagcttcatgtctggtgaatacattgactcagactgcattggaaac
caagatgaggaatgtgaaggattccggcaactcttagcgctcaaatgcaagtttcgaaac
cgtggagagtatgacctatattactcgagcagcacaattgaatgcaatcaaggggagcaa
gagggagtggagcatgagctacagttgcttaatgaagagctaaggaacattgaacttgag
tgccagaatatcatgcaggctcacaggcttcagaaagtgacagaccagtatggagatatc
tgggcattgcatgatggaggattccgaaattataataccagcatagatatgcaaagagga
agactagatgacatcattgaacacccggaaaagtctgacaaagacagttccagtgcttac
aacacagctgaaagctgcagaagtactccactaactgtggaccgttcccctgacagttcc
cttcccagaatgatcgacctcaccaataagaaaaatctgagaagcacaattgcagccaat
caagcctcttctggacagagcagtaaagagtcaacttccaccaaaggcaaaaccactgag
caaggttgtagcattgaaggcaaggagaaggttttggaaagcaacaagcttcctgaacaa
gagaagacagtcactgaacacatcccttacctctctccttaccacagttcctcatacaga
tatgcaaacatcccagcacatgcccggcattatcaaagctacatgcaattaattcaacag
aaatctgcagtggagtatgctcagagtcagctcagtttggtgagcatgtgcaaggagtct
cagaagtgttcagagcccaagatggaatggaaggtgaaaattaggagtgacgggacacgg
tacataacaaagagaccagtgcgtgaccgaattctgaaggaacgtgccttaaagatcaag
gaggagcggagtggcatgactacagatgatgacaccatgagtgagatgaaaatggggcgc
tactggagcaaagaggagagaaagcaacacctggtccgggccaaggagcagcgtcggcgc
cgagagttcatgatgcggagccgcttagagtgtctcaaggagagtcctcagagtggcagc
gagggcaagaaggagatcaacatcattgaactaagtcacaaaaagatgatgaaaaaaaga
aacaagaaaattttggacaactggatgacaatccaagaactgatgacccacggggccaag
tctcctgatggcacgagagttcacaatgcctttctgtcagtcacaactgtatga
DBGET
integrated database retrieval system
